Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20511 Sequoiadendron giganteum HOM05D006557 ORTHO05D008177 1.3e-78 296.2 135 100.0
Dinv43750 Davidia involucrata HOM05D006557 ORTHO05D008177 4.8e-09 65.1 40 62.5
ATR0757G115 Amborella trichopoda HOM05D006557 ORTHO05D008177 8.2e-09 64.3 53 50.9
CSS0001854 Camellia sinensis var. sinensis HOM05D006557 ORTHO05D008177 2.4e-08 62.8 49 49.0
CANSAT56G3931 Cannabis sativa HOM05D006557 ORTHO05D008177 2.4e-08 62.8 42 61.9
Cfa004174 Carpinus fangiana HOM05D006557 ORTHO05D008177 4.0e-08 62.0 49 51.0
COL.COLO4_12633 Corchorus olitorius HOM05D006557 ORTHO05D008177 4.0e-08 62.0 53 50.9
RcHm_v2.0_Chr1g0352061 Rosa chinensis HOM05D006557 ORTHO05D008177 5.3e-08 61.6 37 62.2
Duzib133G0555 Durio zibethinus HOM05D006557 ORTHO05D008177 6.9e-08 61.2 53 47.2
Glyma.18G228300 Glycine max HOM05D006557 ORTHO05D008177 6.9e-08 61.2 49 49.0
SalBow3G2355 Salvia bowleyana HOM05D006557 ORTHO05D008177 6.9e-08 61.2 40 60.0
Actinidia33449 Actinidia chinensis HOM05D006557 ORTHO05D008177 9.0e-08 60.8 40 57.5
Sc02g0002240 Simmondsia chinensis HOM05D006557 ORTHO05D008177 9.0e-08 60.8 40 60.0
Cc02_g37160 Coffea canephora HOM05D006557 ORTHO05D008177 1.2e-07 60.5 53 52.8
Haze_15236 Corylus avellana HOM05D006557 ORTHO05D008177 1.2e-07 60.5 49 49.0
FAN01G0615 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.2e-07 60.5 40 60.0
FAN10G0459 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.2e-07 60.5 40 60.0
Gohir.A07G144300 Gossypium hirsutum HOM05D006557 ORTHO05D008177 1.2e-07 60.5 39 61.5
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 1.2e-07 60.5 46 52.2
Nn6g34278 Nelumbo nucifera HOM05D006557 ORTHO05D008177 1.2e-07 60.5 47 48.9
Oeu058605.1 Olea europaea HOM05D006557 ORTHO05D008177 1.2e-07 60.5 41 56.1
QL08p050821 Quercus lobata HOM05D006557 ORTHO05D008177 1.5e-07 60.1 56 48.2
Phvul.008G069900 Phaseolus vulgaris HOM05D006557 ORTHO05D008177 2.0e-07 59.7 40 57.5
arahy.Tifrunner.gnm1.ann1.P0RXA9 Arachis hypogaea HOM05D006557 ORTHO05D008177 3.4e-07 58.9 40 60.0
CiPaw.01G052200 Carya illinoinensis HOM05D006557 ORTHO05D008177 3.4e-07 58.9 46 50.0
MBI04_g40842_MAGBIO Magnolia biondii HOM05D006557 ORTHO05D008177 3.4e-07 58.9 38 57.9
Rhsim01G0154800 Rhododendron simsii HOM05D006557 ORTHO05D008177 3.4e-07 58.9 41 58.5
TPR.G37774 Trifolium pratense HOM05D006557 ORTHO05D008177 3.4e-07 58.9 46 54.3
Atru.chr5.390 Acer truncatum HOM05D006557 ORTHO05D008177 4.5e-07 58.5 36 58.3
Atru.chr5.396 Acer truncatum HOM05D006557 ORTHO05D008177 4.5e-07 58.5 36 58.3
Dinv32417 Davidia involucrata HOM05D006557 ORTHO05D008177 4.5e-07 58.5 44 52.3
Migut.B01677 Erythranthe guttata HOM05D006557 ORTHO05D008177 4.5e-07 58.5 42 52.4
Gohir.D07G150201 Gossypium hirsutum HOM05D006557 ORTHO05D008177 4.5e-07 58.5 39 59.0
Gorai.001G172000 Gossypium raimondii HOM05D006557 ORTHO05D008177 4.5e-07 58.5 39 59.0
MD02G1195100 Malus domestica HOM05D006557 ORTHO05D008177 4.5e-07 58.5 50 46.0
Hund27329 Selenicereus undatus HOM05D006557 ORTHO05D008177 4.5e-07 58.5 46 47.8
FvH4_7g12930 Fragaria vesca HOM05D006557 ORTHO05D008177 5.8e-07 58.2 39 59.0
FAN06G2259 Fragaria x ananassa HOM05D006557 ORTHO05D008177 5.8e-07 58.2 39 59.0
FAN06G3640 Fragaria x ananassa HOM05D006557 ORTHO05D008177 5.8e-07 58.2 39 59.0
Glyma.09G263800 Glycine max HOM05D006557 ORTHO05D008177 7.6e-07 57.8 40 57.5
Potri.014G077700 Populus trichocarpa HOM05D006557 ORTHO05D008177 7.6e-07 57.8 37 54.1
Prupe.2G153600 Prunus persica HOM05D006557 ORTHO05D008177 7.6e-07 57.8 41 53.7
arahy.Tifrunner.gnm1.ann1.1L2ERA Arachis hypogaea HOM05D006557 ORTHO05D008177 1.0e-06 57.4 40 57.5
Eucgr.E00220 Eucalyptus grandis HOM05D006557 ORTHO05D008177 1.0e-06 57.4 49 44.9
FAN10G2465 Fragaria x ananassa HOM05D006557 ORTHO05D008177 1.0e-06 57.4 40 57.5
Peaxi162Scf00021g00314 Petunia axillaris HOM05D006557 ORTHO05D008177 1.3e-06 57.0 53 45.3
GSVIVG01026363001 Vitis vinifera HOM05D006557 ORTHO05D008177 1.3e-06 57.0 40 57.5
AUR62033372 Chenopodium quinoa HOM05D006557 ORTHO05D008177 1.7e-06 56.6 50 48.0
EL10Ac1g00969 Beta vulgaris HOM05D006557 ORTHO05D008177 2.2e-06 56.2 37 56.8
Thecc.01G369600 Theobroma cacao HOM05D006557 ORTHO05D008177 2.2e-06 56.2 40 55.0
VMungo1383G0754 Vigna mungo HOM05D006557 ORTHO05D008177 2.9e-06 55.8 40 55.0
Lj9A576T36 Lonicera japonica HOM05D006557 ORTHO05D008177 3.8e-06 55.5 40 52.5
FAN03G1058 Fragaria x ananassa HOM05D006557 ORTHO05D008177 4.9e-06 55.1 39 56.4
Medtr7g076590 Medicago truncatula HOM05D006557 ORTHO05D008177 6.5e-06 54.7 37 56.8
DCAR_008582 Daucus carota HOM05D006557 ORTHO05D008177 8.4e-06 54.3 39 53.8
TAR375G0852 Trochodendron aralioides HOM05D006557 ORTHO05D008177 8.4e-06 54.3 40 52.5


User provided reference genes

Program Settings