Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20487 Sequoiadendron giganteum HOM05D003172 ORTHO05D384101 3.5e-67 258.5 160 100.0
TAR623G0379 Trochodendron aralioides HOM05D003172 ORTHO05D003708 9.7e-09 64.3 53 69.8
ClCG10G013300 Citrullus lanatus HOM05D003172 ORTHO05D003708 1.1e-07 60.8 53 69.8
MELO3C026894.2 Cucumis melo HOM05D003172 ORTHO05D003708 1.1e-07 60.8 53 69.8
CsaV3_3G043330 Cucumis sativus L. HOM05D003172 ORTHO05D003708 1.1e-07 60.8 53 69.8
Sed0019950 Sechium edule HOM05D003172 ORTHO05D003708 3.1e-07 59.3 53 67.9
Hund24843 Selenicereus undatus HOM05D003172 ORTHO05D003708 3.1e-07 59.3 53 64.2
TWI32G0690 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 3.1e-07 59.3 59 61.0
TWI34G0902 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 3.1e-07 59.3 59 61.0
Cfa016432 Carpinus fangiana HOM05D003172 ORTHO05D003708 4.1e-07 58.9 53 64.2
Haze_19406 Corylus avellana HOM05D003172 ORTHO05D003708 4.1e-07 58.9 53 64.2
PGR142G1025 Punica granatum HOM05D003172 ORTHO05D003708 5.3e-07 58.5 53 67.9
QL07p020343 Quercus lobata HOM05D003172 ORTHO05D003708 5.3e-07 58.5 53 64.2
ATR0559G169 Amborella trichopoda HOM05D003172 ORTHO05D003708 6.9e-07 58.2 58 63.8
ATR0697G199 Amborella trichopoda HOM05D003172 ORTHO05D003708 6.9e-07 58.2 58 63.8
TAR369G0048 Trochodendron aralioides HOM05D003172 ORTHO05D003708 9.0e-07 57.8 53 64.2
Eucgr.A02083 Eucalyptus grandis HOM05D003172 ORTHO05D003708 1.2e-06 57.4 53 64.2
Hma1.2p1_0183F.1_g080920 Hydrangea macrophylla HOM05D003172 ORTHO05D003708 1.2e-06 57.4 53 66.0
Sed0012949 Sechium edule HOM05D003172 ORTHO05D003708 1.5e-06 57.0 53 67.9
AUR62032669 Chenopodium quinoa HOM05D003172 ORTHO05D003708 2.0e-06 56.6 53 62.3
AUR62035298 Chenopodium quinoa HOM05D003172 ORTHO05D003708 2.0e-06 56.6 53 62.3
Peaxi162Scf00076g00918 Petunia axillaris HOM05D003172 ORTHO05D003708 2.0e-06 56.6 53 66.0
RcHm_v2.0_Chr7g0177371 Rosa chinensis HOM05D003172 ORTHO05D003708 2.0e-06 56.6 53 62.3
AL6G29440 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 67.9
AT5G18230 Arabidopsis thaliana HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 67.9
Carub.0006s1651 Capsella rubella HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 67.9
CARHR194830 Cardamine hirsuta HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 67.9
CiPaw.09G000900 Carya illinoinensis HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 62.3
Dinv37006 Davidia involucrata HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 64.2
FAN13G1822 Fragaria x ananassa HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 62.3
Manes.08G149400 Manihot esculenta HOM05D003172 ORTHO05D003708 3.4e-06 55.8 52 65.4
Nitab4.5_0000001g0360 Nicotiana tabacum HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 66.0
Nitab4.5_0003153g0030 Nicotiana tabacum HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 66.0
Sp6g26090 Schrenkiella parvula HOM05D003172 ORTHO05D003708 3.4e-06 55.8 53 67.9
Lalb_Chr21g0317121 Lupinus albus HOM05D003172 ORTHO05D003708 4.5e-06 55.5 53 58.5
Lalb_Chr06g0173911 Lupinus albus HOM05D003172 ORTHO05D003708 5.9e-06 55.1 53 58.5
Sc19g0006520 Simmondsia chinensis HOM05D003172 ORTHO05D003708 5.9e-06 55.1 53 62.3
BcaNung04946 Brassica carinata HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 66.0
C03p10170 Brassica napus HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 66.0
BolC3t13502H Brassica oleracea HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 66.0
BraA03t10195Z Brassica rapa HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 66.0
CSS0035842 Camellia sinensis var. sinensis HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 62.3
Thhalv10012672m.g Eutrema salsugineum HOM05D003172 ORTHO05D003708 7.7e-06 54.7 53 66.0
FvH4_5g18220 Fragaria vesca HOM05D003172 ORTHO05D003708 7.7e-06 54.7 58 58.6
FAN18G2753 Fragaria x ananassa HOM05D003172 ORTHO05D003708 7.7e-06 54.7 58 58.6
Actinidia22095 Actinidia chinensis HOM05D003172 ORTHO05D003708 1.0e-05 54.3 53 62.3
Actinidia30565 Actinidia chinensis HOM05D003172 ORTHO05D003708 1.0e-05 54.3 53 62.3
FAN04G3171 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.0e-05 54.3 53 62.3
MD14G1244600 Malus domestica HOM05D003172 ORTHO05D003708 1.0e-05 54.3 52 61.5
Manes.09G142400 Manihot esculenta HOM05D003172 ORTHO05D003708 1.0e-05 54.3 58 58.6


User provided reference genes

Program Settings