Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20344 Sequoiadendron giganteum HOM05D005091 ORTHO05D006047 3.4e-138 495.0 244 100.0
MBI01_g12681_MAGBIO Magnolia biondii HOM05D005091 ORTHO05D006047 1.0e-89 334.0 198 79.3
PSO541G2662 Papaver somniferum HOM05D005091 ORTHO05D006047 4.9e-89 331.6 198 78.3
PSO675G3543 Papaver somniferum HOM05D005091 ORTHO05D006047 4.9e-89 331.6 198 78.3
Aqoxy6G01233 Aquilegia oxysepala HOM05D005091 ORTHO05D006047 1.4e-88 330.1 198 77.8
CDE06G2285 Ceratophyllum demersum HOM05D005091 ORTHO05D006047 1.8e-86 323.2 198 77.8
TAR625G0679 Trochodendron aralioides HOM05D005091 ORTHO05D006047 1.8e-86 323.2 198 74.7
ATR0665G578 Amborella trichopoda HOM05D005091 ORTHO05D006047 6.7e-86 321.2 199 76.9
CSS0014539 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 1.5e-85 320.1 198 74.7
CSS0022719 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 1.5e-85 320.1 198 74.7
Lj3g0010610 Lotus japonicus HOM05D005091 ORTHO05D006047 3.3e-85 318.9 198 75.8
QL11p045411 Quercus lobata HOM05D005091 ORTHO05D006047 3.3e-85 318.9 198 74.7
GSVIVG01024219001 Vitis vinifera HOM05D005091 ORTHO05D006047 3.3e-85 318.9 198 75.3
Migut.B00202 Erythranthe guttata HOM05D005091 ORTHO05D006047 7.4e-85 317.8 198 74.7
TWI79G0003 Tripterygium wilfordii HOM05D005091 ORTHO05D006047 9.7e-85 317.4 199 74.9
Haze_02317 Corylus avellana HOM05D005091 ORTHO05D006047 2.2e-84 316.2 198 74.2
Ah.01g019050 Amaranthus hybridus HOM05D005091 ORTHO05D006047 6.3e-84 314.7 198 74.2
Psat4g148720 Pisum sativum HOM05D005091 ORTHO05D006047 6.3e-84 314.7 244 62.7
Eucgr.G01705 Eucalyptus grandis HOM05D005091 ORTHO05D006047 8.2e-84 314.3 198 73.2
Phvul.011G210700 Phaseolus vulgaris HOM05D005091 ORTHO05D006047 8.2e-84 314.3 198 74.7
Ca_23899_v3 Cicer arietinum L. HOM05D005091 ORTHO05D006047 1.1e-83 313.9 244 63.5
FAN20G0404 Fragaria x ananassa HOM05D005091 ORTHO05D006047 1.8e-83 313.2 244 64.3
Solyc01g110030.3 Solanum lycopersicum HOM05D005091 ORTHO05D006047 1.8e-83 313.2 198 73.2
Sopen01g052220 Solanum pennellii HOM05D005091 ORTHO05D006047 1.8e-83 313.2 198 73.2
Atru.chr5.3102 Acer truncatum HOM05D005091 ORTHO05D006047 2.4e-83 312.8 244 65.2
arahy.Tifrunner.gnm1.ann1.PP2YAD Arachis hypogaea HOM05D005091 ORTHO05D006047 2.4e-83 312.8 198 73.2
Ciclev10028263m.g Citrus clementina HOM05D005091 ORTHO05D006047 2.4e-83 312.8 198 72.7
RcHm_v2.0_Chr6g0266641 Rosa chinensis HOM05D005091 ORTHO05D006047 2.4e-83 312.8 198 74.2
arahy.Tifrunner.gnm1.ann1.6QR9E7 Arachis hypogaea HOM05D005091 ORTHO05D006047 3.1e-83 312.4 198 73.2
Medtr8g037340 Medicago truncatula HOM05D005091 ORTHO05D006047 4.1e-83 312.0 198 72.7
Glyma.13G201900 Glycine max HOM05D005091 ORTHO05D006047 5.3e-83 311.6 198 73.2
HPP92_010256 Vanilla planifolia HOM05D005091 ORTHO05D006047 6.9e-83 311.2 198 74.7
MSTRG.16832 Avicennia marina HOM05D005091 ORTHO05D006047 9.0e-83 310.8 198 73.7
Oeu041611.2 Olea europaea HOM05D005091 ORTHO05D006047 9.0e-83 310.8 198 71.7
PGSC0003DMG400030963 Solanum tuberosum HOM05D005091 ORTHO05D006047 1.2e-82 310.5 198 72.7
Thecc.02G079100 Theobroma cacao HOM05D005091 ORTHO05D006047 1.2e-82 310.5 198 73.2
ClCG11G004080 Citrullus lanatus HOM05D005091 ORTHO05D006047 1.5e-82 310.1 198 72.7
COL.COLO4_26004 Corchorus olitorius HOM05D005091 ORTHO05D006047 1.5e-82 310.1 198 74.2
TPR.G1894 Trifolium pratense HOM05D005091 ORTHO05D006047 1.5e-82 310.1 244 62.3
EL10Ac9g21684 Beta vulgaris HOM05D005091 ORTHO05D006047 2.0e-82 309.7 198 74.2
Glyma.12G236400 Glycine max HOM05D005091 ORTHO05D006047 2.0e-82 309.7 198 72.2
Hma1.2p1_0066F.1_g036020 Hydrangea macrophylla HOM05D005091 ORTHO05D006047 2.0e-82 309.7 198 72.2
Manes.12G155700 Manihot esculenta HOM05D005091 ORTHO05D006047 2.0e-82 309.7 246 63.0
CARHR106660 Cardamine hirsuta HOM05D005091 ORTHO05D006047 2.6e-82 309.3 198 74.2
Peaxi162Scf00016g00337 Petunia axillaris HOM05D005091 ORTHO05D006047 2.6e-82 309.3 198 72.7
SalBow6G4139 Salvia bowleyana HOM05D005091 ORTHO05D006047 2.6e-82 309.3 198 73.2
AT2G16405 Arabidopsis thaliana HOM05D005091 ORTHO05D006047 3.4e-82 308.9 198 74.2
Cpa.g.sc150.55 Carica papaya HOM05D005091 ORTHO05D006047 3.4e-82 308.9 198 70.7
CsaV3_2G015120 Cucumis sativus L. HOM05D005091 ORTHO05D006047 5.9e-82 308.1 198 72.2
MELO3C023337.2 Cucumis melo HOM05D005091 ORTHO05D006047 7.6e-82 307.8 198 72.2
Duzib132G0651 Durio zibethinus HOM05D005091 ORTHO05D006047 1.0e-81 307.4 198 73.2
Nitab4.5_0009512g0060 Nicotiana tabacum HOM05D005091 ORTHO05D006047 1.0e-81 307.4 198 72.7
AL3G52590 Arabidopsis lyrata HOM05D005091 ORTHO05D006047 1.3e-81 307.0 198 73.7
CiPaw.05G070800 Carya illinoinensis HOM05D005091 ORTHO05D006047 1.3e-81 307.0 198 72.2
Prupe.8G089300 Prunus persica HOM05D005091 ORTHO05D006047 1.7e-81 306.6 244 63.1
Aa31LG8G13770 Aethionema arabicum HOM05D005091 ORTHO05D006047 2.2e-81 306.2 200 74.0
Carub.0003s3018 Capsella rubella HOM05D005091 ORTHO05D006047 2.9e-81 305.8 198 73.2
Rhsim05G0070500 Rhododendron simsii HOM05D005091 ORTHO05D006047 2.9e-81 305.8 198 72.7
VMungo1127G0930 Vigna mungo HOM05D005091 ORTHO05D006047 2.9e-81 305.8 198 72.2
BcaB03g16352 Brassica carinata HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
BcaC06g36149 Brassica carinata HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
A07p04510 Brassica napus HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
C07p07220 Brassica napus HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
BolC7t41142H Brassica oleracea HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
BraA07t28242Z Brassica rapa HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 73.7
Lalb_Chr03g0034131 Lupinus albus HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 72.2
Sed0016950 Sechium edule HOM05D005091 ORTHO05D006047 3.8e-81 305.4 198 71.7
MD05G1059400 Malus domestica HOM05D005091 ORTHO05D006047 5.0e-81 305.1 194 74.2
Sp3g29690 Schrenkiella parvula HOM05D005091 ORTHO05D006047 5.0e-81 305.1 198 73.7
Thhalv10022667m.g Eutrema salsugineum HOM05D005091 ORTHO05D006047 6.5e-81 304.7 198 73.7
Gohir.D01G004000 Gossypium hirsutum HOM05D005091 ORTHO05D006047 6.5e-81 304.7 198 73.2
Gorai.002G004900 Gossypium raimondii HOM05D005091 ORTHO05D006047 6.5e-81 304.7 198 73.2
CSS0037916 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 8.5e-81 304.3 204 70.6
unitig_21.g20796 Utricularia gibba HOM05D005091 ORTHO05D006047 1.4e-80 303.5 197 73.6
Nitab4.5_0005919g0020 Nicotiana tabacum HOM05D005091 ORTHO05D006047 3.2e-80 302.4 204 70.6
Hund06247 Selenicereus undatus HOM05D005091 ORTHO05D006047 3.2e-80 302.4 192 72.9
FAN15G1732 Fragaria x ananassa HOM05D005091 ORTHO05D006047 4.2e-80 302.0 261 60.2
Gohir.A01G004000 Gossypium hirsutum HOM05D005091 ORTHO05D006047 5.5e-80 301.6 198 72.7
Mapoly0099s0024 Marchantia polymorpha HOM05D005091 ORTHO05D006047 5.5e-80 301.6 198 70.2
Sabra04G0107000 Salix brachista HOM05D005091 ORTHO05D006047 5.5e-80 301.6 198 71.2
vmacro17453 Vaccinium macrocarpon HOM05D005091 ORTHO05D006047 7.2e-80 301.2 244 63.1
Zm00001eb151660 Zea mays HOM05D005091 ORTHO05D006047 7.2e-80 301.2 197 70.6
Potri.004G160000 Populus trichocarpa HOM05D005091 ORTHO05D006047 9.4e-80 300.8 198 70.7
CiPaw.06G131700 Carya illinoinensis HOM05D005091 ORTHO05D006047 2.7e-79 299.3 198 70.7
PGR042G2402 Punica granatum HOM05D005091 ORTHO05D006047 2.7e-79 299.3 199 71.4
Os01g0776400 Oryza sativa ssp. japonica HOM05D005091 ORTHO05D006047 3.6e-79 298.9 196 70.4
DCAR_004295 Daucus carota HOM05D005091 ORTHO05D006047 1.0e-78 297.4 198 70.2
Pp3c21_5350 Physcomitrium patens HOM05D005091 ORTHO05D006047 1.8e-78 296.6 204 69.1
Cc02_g17150 Coffea canephora HOM05D005091 ORTHO05D006047 2.3e-78 296.2 198 71.2
Lsat_1_v5_gn_7_91761 Lactuca sativa HOM05D005091 ORTHO05D006047 3.9e-78 295.4 198 68.7
MD10G1067500 Malus domestica HOM05D005091 ORTHO05D006047 5.1e-78 295.0 191 73.3
THA.LOC104807298 Tarenaya hassleriana HOM05D005091 ORTHO05D006047 5.1e-78 295.0 197 71.6
HanXRQChr04g0127771 Helianthus annuus HOM05D005091 ORTHO05D006047 6.7e-78 294.7 198 70.7
Oeu004806.3 Olea europaea HOM05D005091 ORTHO05D006047 6.7e-78 294.7 193 70.5
ECA236G1753 Erigeron canadensis HOM05D005091 ORTHO05D006047 1.1e-77 293.9 198 69.7
CANSAT11G2456 Cannabis sativa HOM05D005091 ORTHO05D006047 1.5e-77 293.5 244 61.1
AUR62016783 Chenopodium quinoa HOM05D005091 ORTHO05D006047 1.9e-77 293.1 192 71.9
HPP92_010449 Vanilla planifolia HOM05D005091 ORTHO05D006047 2.5e-77 292.7 198 72.7
CSS0016397 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 3.3e-77 292.4 198 69.7
CSS0020327 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 5.7e-77 291.6 204 67.2
SMO232G0022 Selaginella moellendorffii HOM05D005091 ORTHO05D006047 5.7e-77 291.6 199 69.3
Lsat_1_v5_gn_9_107760 Lactuca sativa HOM05D005091 ORTHO05D006047 2.2e-76 289.7 198 68.2
Gohir.A04G124200 Gossypium hirsutum HOM05D005091 ORTHO05D006047 6.3e-76 288.1 198 68.2
Gorai.012G154700 Gossypium raimondii HOM05D005091 ORTHO05D006047 1.8e-75 286.6 198 68.2
Nn5g29154 Nelumbo nucifera HOM05D005091 ORTHO05D006047 2.4e-75 286.2 177 74.6
Gohir.D04G166300 Gossypium hirsutum HOM05D005091 ORTHO05D006047 9.1e-75 284.3 198 67.7
Lj5C193G6 Lonicera japonica HOM05D005091 ORTHO05D006047 1.5e-74 283.5 222 63.5
CSS0039319 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 2.6e-74 282.7 198 67.7
SEGI_12567 Sequoiadendron giganteum HOM05D005091 ORTHO05D006047 6.5e-73 278.1 138 100.0
TAR381G0878 Trochodendron aralioides HOM05D005091 ORTHO05D006047 1.1e-67 260.8 155 79.4
Dinv42028 Davidia involucrata HOM05D005091 ORTHO05D006047 2.7e-63 246.1 198 59.6
Potri.009G121100 Populus trichocarpa HOM05D005091 ORTHO05D006047 8.0e-63 244.6 243 53.5
CBR_g20107 Chara braunii HOM05D005091 ORTHO05D006047 1.4e-62 243.8 198 58.1
RcHm_v2.0_Chr6g0266811 Rosa chinensis HOM05D005091 ORTHO05D006047 2.6e-61 239.6 225 58.2
AagrBONN_evm.TU.Sc2ySwM_344.1521 Anthoceros agrestis HOM05D005091 ORTHO05D006047 2.1e-55 219.9 164 65.2
FvH4_2g09910 Fragaria vesca HOM05D005091 ORTHO05D006047 1.6e-50 203.8 184 57.6
Actinidia02234 Actinidia chinensis HOM05D005091 ORTHO05D006047 8.0e-47 191.4 131 68.7
Hma1.2p1_0066F.1_g036030 Hydrangea macrophylla HOM05D005091 ORTHO05D006047 5.2e-46 188.7 131 67.9
SalBow6G1040 Salvia bowleyana HOM05D005091 ORTHO05D006047 1.2e-34 151.0 94 73.4
CSS0007587 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 7.3e-32 141.7 101 64.4
FAN24G2910 Fragaria x ananassa HOM05D005091 ORTHO05D006047 3.6e-31 139.4 143 51.7
AUR62010439 Chenopodium quinoa HOM05D005091 ORTHO05D006047 8.9e-30 134.8 133 52.6
SGA_v2.0_scaffold58G20494 Striga asiatica HOM05D005091 ORTHO05D006047 3.2e-27 126.3 164 43.3
CSS0009403 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 2.3e-22 110.2 60 78.3
CSS0043881 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 6.8e-22 108.6 60 76.7
CSS0046659 Camellia sinensis var. sinensis HOM05D005091 ORTHO05D006047 5.1e-17 92.4 66 60.6
MBI03_g43429_MAGBIO Magnolia biondii HOM05D005091 ORTHO05D006047 2.6e-13 80.1 59 61.0
Carub.0008s2443 Capsella rubella HOM05D001610 ORTHO05D001585 7.3e-08 62.0 67 47.8
TAR381G0064 Trochodendron aralioides HOM05D005091 ORTHO05D006047 2.8e-07 60.1 41 63.4
MD03G1263200 Malus domestica HOM05D002943 ORTHO05D002685 4.7e-07 59.3 64 45.3
Oeu054736.1 Olea europaea HOM05D002943 ORTHO05D002685 4.7e-07 59.3 124 31.5
ATR0332G039 Amborella trichopoda HOM05D002943 ORTHO05D002685 8.1e-07 58.5 70 44.3
Lj2A1170T16 Lonicera japonica HOM05D002943 ORTHO05D002685 1.1e-06 58.2 80 40.0
SGA_v2.0_scaffold221G42677 Striga asiatica HOM05D000526 ORTHO05D002053 1.1e-06 58.2 61 41.0
Sed0026548 Sechium edule HOM05D002943 ORTHO05D002685 1.4e-06 57.8 64 45.3
FvH4_7g22780 Fragaria vesca HOM05D000526 ORTHO05D002053 2.4e-06 57.0 63 38.1
FAN03G2826 Fragaria x ananassa HOM05D000526 ORTHO05D002053 2.4e-06 57.0 63 38.1
FAN06G1060 Fragaria x ananassa HOM05D000526 ORTHO05D002053 2.4e-06 57.0 63 38.1
FAN10G2071 Fragaria x ananassa HOM05D000526 ORTHO05D007120 2.4e-06 57.0 63 38.1
RcHm_v2.0_Chr1g0367881 Rosa chinensis HOM05D000526 ORTHO05D002053 2.4e-06 57.0 63 38.1
AUR62006609 Chenopodium quinoa HOM05D002943 ORTHO05D002685 3.1e-06 56.6 82 35.4
QL06p037843 Quercus lobata HOM05D002943 ORTHO05D002685 3.1e-06 56.6 82 36.6
Prupe.2G237500 Prunus persica HOM05D000526 ORTHO05D002053 5.2e-06 55.8 63 38.1
AagrBONN_evm.TU.Sc2ySwM_368.1648 Anthoceros agrestis HOM05D002943 ORTHO05D002685 6.8e-06 55.5 66 42.4
EL10Ac2g04729 Beta vulgaris HOM05D000526 ORTHO05D002053 6.8e-06 55.5 63 39.7
FAN01G1713 Fragaria x ananassa HOM05D000526 ORTHO05D002053 6.8e-06 55.5 63 36.5
PGR142G1904 Punica granatum HOM05D000526 ORTHO05D002053 6.8e-06 55.5 61 41.0
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 6.8e-06 55.5 78 38.5
Zm00001eb276600 Zea mays HOM05D002943 ORTHO05D002685 6.8e-06 55.5 78 38.5
CANSAT56G0656 Cannabis sativa HOM05D000526 ORTHO05D002053 8.9e-06 55.1 63 38.1
CANSAT56G3034 Cannabis sativa HOM05D000526 ORTHO05D002053 8.9e-06 55.1 63 38.1
PRCOL_00003847 Prasinoderma coloniale HOM05D005091 ORTHO05D006047 8.9e-06 55.1 106 33.0
QL12p021366 Quercus lobata HOM05D002943 ORTHO05D002685 8.9e-06 55.1 66 43.9


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