Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20208 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 2.7e-70 268.5 130 100.0
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 4.4e-28 128.3 89 67.4
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 1.3e-27 126.7 115 53.9
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 1.7e-27 126.3 83 71.1
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 2.9e-27 125.6 76 76.3
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 4.9e-27 124.8 115 54.8
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 6.4e-27 124.4 105 59.0
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 8.3e-27 124.0 89 64.0
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 8.3e-27 124.0 77 74.0
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 8.3e-27 124.0 86 66.3
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 8.3e-27 124.0 100 61.0
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 8.3e-27 124.0 76 73.7
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 8.3e-27 124.0 77 74.0
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 1.1e-26 123.6 89 62.9
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 1.1e-26 123.6 75 76.0
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 1.9e-26 122.9 115 52.2
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 1.9e-26 122.9 115 52.2
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 1.9e-26 122.9 115 52.2
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 1.9e-26 122.9 115 52.2
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 1.9e-26 122.9 115 52.2
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 1.9e-26 122.9 94 59.6
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 2.4e-26 122.5 115 52.2
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 2.4e-26 122.5 81 70.4
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 2.4e-26 122.5 76 72.4
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 3.2e-26 122.1 76 73.7
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 3.2e-26 122.1 76 73.7
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 3.2e-26 122.1 76 73.7
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 4.1e-26 121.7 76 72.4
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 4.1e-26 121.7 76 72.4
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 4.1e-26 121.7 76 72.4
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 5.4e-26 121.3 76 71.1
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 5.4e-26 121.3 76 72.4
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 9.2e-26 120.6 74 70.3
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 9.2e-26 120.6 76 72.4
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 9.2e-26 120.6 76 71.1
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 1.2e-25 120.2 72 76.4
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 1.2e-25 120.2 84 69.0
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 1.2e-25 120.2 89 61.8
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 1.2e-25 120.2 76 72.4
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 1.6e-25 119.8 76 69.7
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 1.6e-25 119.8 106 56.6
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 2.7e-25 119.0 76 71.1
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 2.7e-25 119.0 76 69.7
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 2.7e-25 119.0 83 66.3
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 2.7e-25 119.0 90 62.2
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 2.7e-25 119.0 86 66.3
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 3.5e-25 118.6 76 69.7
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 3.5e-25 118.6 76 71.1
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 3.5e-25 118.6 76 71.1
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 3.5e-25 118.6 89 64.0
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 3.5e-25 118.6 76 71.1
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 3.5e-25 118.6 76 71.1
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 6.0e-25 117.9 88 63.6
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 7.8e-25 117.5 77 70.1
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 7.8e-25 117.5 75 72.0
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 7.8e-25 117.5 76 68.4
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 1.0e-24 117.1 89 60.7
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 1.0e-24 117.1 76 72.4
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 1.3e-24 116.7 88 63.6
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 1.3e-24 116.7 76 67.1
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 1.3e-24 116.7 75 72.0
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 2.3e-24 115.9 79 68.4
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 2.3e-24 115.9 90 61.1
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 2.3e-24 115.9 76 69.7
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 3.0e-24 115.5 76 71.1
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 3.0e-24 115.5 76 68.4
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 3.0e-24 115.5 77 67.5
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 3.9e-24 115.2 77 67.5
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 5.1e-24 114.8 96 58.3
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 5.1e-24 114.8 96 58.3
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 6.6e-24 114.4 96 58.3
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 6.6e-24 114.4 96 58.3
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 6.6e-24 114.4 76 68.4
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 8.6e-24 114.0 75 70.7
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 8.6e-24 114.0 78 66.7
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 1.1e-23 113.6 76 67.1
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 1.1e-23 113.6 89 59.6
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 1.1e-23 113.6 77 67.5
Lj7A720G77 Lonicera japonica HOM05D006429 ORTHO05D008173 1.5e-23 113.2 98 57.1
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 1.5e-23 113.2 78 65.4
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 1.5e-23 113.2 78 65.4
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 7.3e-23 110.9 77 68.8
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 9.5e-23 110.5 113 50.4
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 9.5e-23 110.5 75 66.7
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 1.2e-22 110.2 102 55.9
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 1.2e-22 110.2 102 55.9
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 1.6e-22 109.8 74 66.2
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 4.7e-22 108.2 76 64.5
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 8.1e-22 107.5 65 72.3
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 4.0e-21 105.1 88 58.0
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 2.0e-20 102.8 77 64.9
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 3.4e-20 102.1 79 59.5
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 3.4e-20 102.1 81 55.6
Pp3c7_12170 Physcomitrium patens HOM05D006429 ORTHO05D008173 4.4e-20 101.7 88 53.4
CSS0049939 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 2.8e-14 82.4 77 53.2
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 5.8e-12 74.7 49 69.4
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 1.7e-11 73.2 53 62.3
AUR62032544 Chenopodium quinoa HOM05D006429 ORTHO05D008173 3.8e-11 72.0 76 47.4
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 7.1e-10 67.8 48 64.6
Nitab4.5_0005761g0120 Nicotiana tabacum HOM05D006429 ORTHO05D008173 7.1e-10 67.8 48 64.6
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 3.5e-09 65.5 48 58.3
Cfa022368 Carpinus fangiana HOM05D004005 ORTHO05D004876 9.6e-07 57.4 69 44.9


User provided reference genes

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