Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20010 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 8.5e-44 179.9 86 100.0
SEGI_23348 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 5.2e-25 117.5 61 93.4
Phvul.007G057400 Phaseolus vulgaris HOM05D002310 ORTHO05D002326 2.9e-12 75.1 65 52.3
Dinv44536 Davidia involucrata HOM05D002310 ORTHO05D002326 3.8e-12 74.7 65 50.8
Oeu011619.2 Olea europaea HOM05D002310 ORTHO05D002326 3.8e-12 74.7 68 52.9
CSS0045550 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 5.0e-12 74.3 65 53.8
CiPaw.02G097300 Carya illinoinensis HOM05D002310 ORTHO05D002326 5.0e-12 74.3 65 49.2
SEGI_25058 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 5.0e-12 74.3 42 85.7
PGSC0003DMG400030084 Solanum tuberosum HOM05D002310 ORTHO05D002326 5.0e-12 74.3 65 53.8
Haze_00900 Corylus avellana HOM05D002310 ORTHO05D002326 6.6e-12 73.9 86 40.7
Sabra08G0116500 Salix brachista HOM05D002310 ORTHO05D002326 8.6e-12 73.6 74 47.3
Glyma.10G248100 Glycine max HOM05D002310 ORTHO05D002326 1.1e-11 73.2 65 50.8
Solyc09g076040.3 Solanum lycopersicum HOM05D002310 ORTHO05D002326 1.1e-11 73.2 65 52.3
Sopen09g030870 Solanum pennellii HOM05D002310 ORTHO05D002326 1.1e-11 73.2 65 52.3
TAR362G0961 Trochodendron aralioides HOM05D002310 ORTHO05D002326 1.1e-11 73.2 80 45.0
GSVIVG01017976001 Vitis vinifera HOM05D002310 ORTHO05D002326 1.1e-11 73.2 65 49.2
CSS0035785 Camellia sinensis var. sinensis HOM05D002310 ORTHO05D002326 1.5e-11 72.8 65 50.8
ClCG06G006230 Citrullus lanatus HOM05D002310 ORTHO05D002326 1.5e-11 72.8 65 47.7
Dinv13995 Davidia involucrata HOM05D002310 ORTHO05D002326 1.5e-11 72.8 65 49.2
CANSAT78G0613 Cannabis sativa HOM05D002310 ORTHO05D002326 1.9e-11 72.4 65 46.2
COL.COLO4_21478 Corchorus olitorius HOM05D002310 ORTHO05D002326 1.9e-11 72.4 65 49.2
CAN.G490.5 Capsicum annuum HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 52.3
CiPaw.01G166000 Carya illinoinensis HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 47.7
Ca_10897_v3 Cicer arietinum L. HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 49.2
MELO3C012650.2 Cucumis melo HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 47.7
CsaV3_7G022500 Cucumis sativus L. HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 47.7
Lalb_Chr02g0140601 Lupinus albus HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 50.8
Nitab4.5_0004258g0040 Nicotiana tabacum HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 50.8
TAR362G0281 Trochodendron aralioides HOM05D002310 ORTHO05D002326 2.5e-11 72.0 65 50.8
Gohir.A09G056100 Gossypium hirsutum HOM05D002310 ORTHO05D002326 3.3e-11 71.6 65 47.7
Gohir.D09G055300 Gossypium hirsutum HOM05D002310 ORTHO05D002326 3.3e-11 71.6 65 47.7
Sed0017994 Sechium edule HOM05D002310 ORTHO05D002326 3.3e-11 71.6 65 47.7
Duzib212G0102 Durio zibethinus HOM05D002310 ORTHO05D002326 4.2e-11 71.2 65 46.2
Sabra10G0055400 Salix brachista HOM05D002310 ORTHO05D002326 4.2e-11 71.2 65 49.2
Oeu020078.1 Olea europaea HOM05D002310 ORTHO05D002326 5.5e-11 70.9 65 49.2
Potri.008G152900 Populus trichocarpa HOM05D002310 ORTHO05D002326 5.5e-11 70.9 65 47.7
Thecc.04G232000 Theobroma cacao HOM05D002310 ORTHO05D002326 5.5e-11 70.9 65 47.7
TAR636G0317 Trochodendron aralioides HOM05D002310 ORTHO05D002326 5.5e-11 70.9 67 49.3
Aqoxy2G03391 Aquilegia oxysepala HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 53.8
FAN17G0990 Fragaria x ananassa HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 46.2
FAN22G1262 Fragaria x ananassa HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 46.2
Hma1.2p1_1344F.1_g277120 Hydrangea macrophylla HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 47.7
Lj6A608G62 Lonicera japonica HOM05D002310 ORTHO05D002326 7.2e-11 70.5 64 48.4
Manes.03G178600 Manihot esculenta HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 46.2
TAR362G0728 Trochodendron aralioides HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 49.2
VMungo0720G0449 Vigna mungo HOM05D002310 ORTHO05D002326 7.2e-11 70.5 65 49.2
Cfa015645 Carpinus fangiana HOM05D002310 ORTHO05D002326 9.5e-11 70.1 65 44.6
FvH4_4g15540 Fragaria vesca HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 46.2
FAN07G0096 Fragaria x ananassa HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 46.2
FAN12G2432 Fragaria x ananassa HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 46.2
Glyma.20G146000 Glycine max HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 49.2
Lj5g0003431 Lotus japonicus HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 49.2
Medtr1g103740 Medicago truncatula HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 49.2
Rhsim04G0202200 Rhododendron simsii HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 46.2
TPR.G5506 Trifolium pratense HOM05D002310 ORTHO05D002326 1.2e-10 69.7 65 49.2
EL10As3g23290 Beta vulgaris HOM05D002310 ORTHO05D002326 1.6e-10 69.3 65 44.6
DCAR_027217 Daucus carota HOM05D002310 ORTHO05D002326 1.6e-10 69.3 65 49.2
PSO832G1500 Papaver somniferum HOM05D002310 ORTHO05D002326 1.6e-10 69.3 65 50.8
TWI73G1015 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 1.6e-10 69.3 65 46.2
MSTRG.4031 Avicennia marina HOM05D002310 ORTHO05D002326 2.1e-10 68.9 65 47.7
Nn4g26323 Nelumbo nucifera HOM05D002310 ORTHO05D002326 2.1e-10 68.9 65 47.7
Duzib151G0125 Durio zibethinus HOM05D002310 ORTHO05D002326 2.8e-10 68.6 65 46.2
Gorai.006G068300 Gossypium raimondii HOM05D002310 ORTHO05D002326 2.8e-10 68.6 65 46.2
PSO210G3829 Papaver somniferum HOM05D002310 ORTHO05D002326 2.8e-10 68.6 64 51.6
RcHm_v2.0_Chr4g0416221 Rosa chinensis HOM05D002310 ORTHO05D002326 2.8e-10 68.6 64 45.3
SEGI_35071 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 2.8e-10 68.6 65 52.3
Atru.ctg752_3.77 Acer truncatum HOM05D002310 ORTHO05D002326 3.6e-10 68.2 65 46.2
arahy.Tifrunner.gnm1.ann1.5P4QKH Arachis hypogaea HOM05D002310 ORTHO05D002326 3.6e-10 68.2 65 46.2
arahy.Tifrunner.gnm1.ann1.Q8TT5G Arachis hypogaea HOM05D002310 ORTHO05D002326 3.6e-10 68.2 65 46.2
AUR62033632 Chenopodium quinoa HOM05D002310 ORTHO05D002326 3.6e-10 68.2 65 46.2
AUR62034749 Chenopodium quinoa HOM05D002310 ORTHO05D002326 3.6e-10 68.2 65 46.2
ATR0697G286 Amborella trichopoda HOM05D002310 ORTHO05D002326 4.7e-10 67.8 65 47.7
ECA240G3014 Erigeron canadensis HOM05D002310 ORTHO05D002326 4.7e-10 67.8 64 48.4
Eucgr.H03481 Eucalyptus grandis HOM05D002310 ORTHO05D002326 4.7e-10 67.8 49 59.2
QL06p002477 Quercus lobata HOM05D002310 ORTHO05D002326 4.7e-10 67.8 65 44.6
TWI09G0856 Tripterygium wilfordii HOM05D002310 ORTHO05D002326 4.7e-10 67.8 65 43.1
Sc15g0003290 Simmondsia chinensis HOM05D002310 ORTHO05D002326 6.1e-10 67.4 65 47.7
CDE05G2383 Ceratophyllum demersum HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 49.2
Ciclev10005817m.g Citrus clementina HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 44.6
Cc03_g03780 Coffea canephora HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 50.8
Potri.010G087400 Populus trichocarpa HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 46.2
Prupe.1G013600 Prunus persica HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 46.2
HPP92_024362 Vanilla planifolia HOM05D002310 ORTHO05D002326 8.0e-10 67.0 65 49.2
Actinidia40145 Actinidia chinensis HOM05D002310 ORTHO05D002326 1.0e-09 66.6 65 43.1
Actinidia23510 Actinidia chinensis HOM05D002310 ORTHO05D002326 1.4e-09 66.2 65 44.6
SGA_v2.0_scaffold39G15233 Striga asiatica HOM05D002310 ORTHO05D002326 1.4e-09 66.2 65 46.2
Peaxi162Scf00092g01019 Petunia axillaris HOM05D002310 ORTHO05D002326 1.8e-09 65.9 65 49.2
PGR004G1373 Punica granatum HOM05D002310 ORTHO05D002326 1.8e-09 65.9 49 55.1
Migut.G00339 Erythranthe guttata HOM05D002310 ORTHO05D002326 2.3e-09 65.5 65 43.1
HanXRQChr05g0145901 Helianthus annuus HOM05D002310 ORTHO05D002326 2.3e-09 65.5 65 47.7
MD16G1193900 Malus domestica HOM05D002310 ORTHO05D002326 2.3e-09 65.5 65 44.6
Psat6g207480 Pisum sativum HOM05D002310 ORTHO05D002326 3.0e-09 65.1 65 46.2
SGA_v2.0_scaffold257G45713 Striga asiatica HOM05D002310 ORTHO05D002326 5.2e-09 64.3 65 44.6
Lsat_1_v5_gn_7_67261 Lactuca sativa HOM05D002310 ORTHO05D002326 8.9e-09 63.5 65 44.6
MD13G1193000 Malus domestica HOM05D002310 ORTHO05D002326 1.2e-08 63.2 65 41.5
SalBow2G3435 Salvia bowleyana HOM05D002310 ORTHO05D002326 1.2e-08 63.2 65 44.6
SEGI_25443 Sequoiadendron giganteum HOM05D000031 ORTHO05D050962 1.2e-08 63.2 29 93.1
Os03g0159200 Oryza sativa ssp. japonica HOM05D002310 ORTHO05D002326 2.6e-08 62.0 64 45.3
Sc19g0004150 Simmondsia chinensis HOM05D002310 ORTHO05D002326 2.6e-08 62.0 65 43.1
Zm00001eb403270 Zea mays HOM05D002310 ORTHO05D002326 2.6e-08 62.0 64 46.9
SEGI_02165 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 4.4e-08 61.2 30 90.0
SEGI_16224 Sequoiadendron giganteum HOM05D001707 ORTHO05D001694 5.7e-08 60.8 27 96.3
SEGI_31762 Sequoiadendron giganteum HOM05D000379 ORTHO05D000254 5.7e-08 60.8 27 96.3
SEGI_40124 Sequoiadendron giganteum HOM05D000071 ORTHO05D000029 5.7e-08 60.8 27 96.3
SEGI_14589 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 9.8e-08 60.1 34 76.5
Zm00001eb200440 Zea mays HOM05D002310 ORTHO05D002326 9.8e-08 60.1 64 42.2
BcaB06g26348 Brassica carinata HOM05D002310 ORTHO05D002326 1.3e-07 59.7 65 36.9
BcaC05g28069 Brassica carinata HOM05D002310 ORTHO05D002326 1.7e-07 59.3 65 35.4
A05p26290 Brassica napus HOM05D002310 ORTHO05D002326 1.7e-07 59.3 65 35.4
C05p40910 Brassica napus HOM05D002310 ORTHO05D002326 1.7e-07 59.3 65 35.4
BolC5t32833H Brassica oleracea HOM05D002310 ORTHO05D002326 1.7e-07 59.3 65 35.4
BraA05t21506Z Brassica rapa HOM05D002310 ORTHO05D002326 1.7e-07 59.3 65 35.4
Carub.0003s2261 Capsella rubella HOM05D002310 ORTHO05D002326 2.2e-07 58.9 65 38.5
Sp3g20200 Schrenkiella parvula HOM05D002310 ORTHO05D002326 2.2e-07 58.9 65 36.9
SEGI_29901 Sequoiadendron giganteum HOM05D008111 ORTHO05D010192 2.8e-07 58.5 27 92.6
ATR0820G154 Amborella trichopoda HOM05D002310 ORTHO05D002326 8.3e-07 57.0 41 56.1
AL3G36740 Arabidopsis lyrata HOM05D002310 ORTHO05D002326 8.3e-07 57.0 65 36.9
CARHR098340 Cardamine hirsuta HOM05D002310 ORTHO05D002326 1.1e-06 56.6 65 35.4
SEGI_25854 Sequoiadendron giganteum HOM05D000093 ORTHO05D009660 1.1e-06 56.6 27 88.9
SEGI_33353 Sequoiadendron giganteum HOM05D002310 ORTHO05D002326 1.1e-06 56.6 65 46.2
AT3G22430 Arabidopsis thaliana HOM05D002310 ORTHO05D002326 1.4e-06 56.2 65 36.9
SEGI_25823 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.4e-06 56.2 59 47.5
Thhalv10020450m.g Eutrema salsugineum HOM05D002310 ORTHO05D002326 2.4e-06 55.5 65 33.8
THA.LOC104808546 Tarenaya hassleriana HOM05D002310 ORTHO05D002326 4.1e-06 54.7 65 38.5


User provided reference genes

Program Settings