Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19987 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 5.7e-96 354.4 194 100.0
SEGI_30621 Sequoiadendron giganteum HOM05D005582 ORTHO05D007028 3.7e-79 298.5 143 100.0
Dinv29525 Davidia involucrata HOM05D005582 ORTHO05D007028 1.3e-23 114.0 104 52.9
MBI18_g09609_MAGBIO Magnolia biondii HOM05D005582 ORTHO05D007028 2.9e-23 112.8 104 51.9
TPR.G26104 Trifolium pratense HOM05D005582 ORTHO05D007028 3.8e-23 112.5 104 54.8
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 6.4e-23 111.7 136 46.3
Duzib151G0781 Durio zibethinus HOM05D005582 ORTHO05D007028 6.4e-23 111.7 104 55.8
Duzib151G1162 Durio zibethinus HOM05D005582 ORTHO05D007028 6.4e-23 111.7 104 55.8
Sc25g0001750 Simmondsia chinensis HOM05D005582 ORTHO05D007028 6.4e-23 111.7 104 52.9
Prupe.1G108200 Prunus persica HOM05D005582 ORTHO05D007028 1.1e-22 110.9 104 53.8
GSVIVG01017603001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.1e-22 110.9 104 53.8
GSVIVG01017662001 Vitis vinifera HOM05D005582 ORTHO05D007028 1.1e-22 110.9 104 53.8
CSS0025323 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 1.4e-22 110.5 104 51.0
FvH4_4g21250 Fragaria vesca HOM05D005582 ORTHO05D007028 1.4e-22 110.5 104 51.9
TWI53G0357 Tripterygium wilfordii HOM05D005582 ORTHO05D007028 1.9e-22 110.2 104 52.9
Nn4g25411 Nelumbo nucifera HOM05D005582 ORTHO05D007028 2.4e-22 109.8 136 47.1
ATR0796G139 Amborella trichopoda HOM05D005582 ORTHO05D007028 3.2e-22 109.4 106 53.8
Cfa015717 Carpinus fangiana HOM05D005582 ORTHO05D007028 3.2e-22 109.4 104 52.9
Lj5g0009067 Lotus japonicus HOM05D005582 ORTHO05D007028 3.2e-22 109.4 104 52.9
Medtr1g102710 Medicago truncatula HOM05D005582 ORTHO05D007028 3.2e-22 109.4 104 52.9
Psat6g203520 Pisum sativum HOM05D005582 ORTHO05D007028 3.2e-22 109.4 104 52.9
RcHm_v2.0_Chr4g0426871 Rosa chinensis HOM05D005582 ORTHO05D007028 4.1e-22 109.0 104 51.9
Aqoxy5G02775 Aquilegia oxysepala HOM05D005582 ORTHO05D007028 5.4e-22 108.6 104 53.8
FAN07G0038 Fragaria x ananassa HOM05D005582 ORTHO05D007028 5.4e-22 108.6 104 51.9
MELO3C021237.2 Cucumis melo HOM05D005582 ORTHO05D007028 7.1e-22 108.2 104 51.0
MD13G1143700 Malus domestica HOM05D005582 ORTHO05D007028 7.1e-22 108.2 128 46.9
Lj3C839G18 Lonicera japonica HOM05D005582 ORTHO05D007028 9.2e-22 107.8 104 51.0
PSO170G3214 Papaver somniferum HOM05D005582 ORTHO05D007028 9.2e-22 107.8 104 51.9
QL06p013845 Quercus lobata HOM05D005582 ORTHO05D007028 9.2e-22 107.8 104 50.0
QL93p1872_0012 Quercus lobata HOM05D005582 ORTHO05D007028 9.2e-22 107.8 104 50.0
TAR362G0979 Trochodendron aralioides HOM05D005582 ORTHO05D007028 9.2e-22 107.8 128 46.9
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea HOM05D005582 ORTHO05D007028 1.2e-21 107.5 104 51.0
Lalb_Chr06g0160761 Lupinus albus HOM05D005582 ORTHO05D007028 1.2e-21 107.5 104 52.9
Ca_10846_v3 Cicer arietinum L. HOM05D005582 ORTHO05D007028 1.6e-21 107.1 104 51.9
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea HOM05D005582 ORTHO05D007028 2.1e-21 106.7 104 51.0
ClCG06G004260 Citrullus lanatus HOM05D005582 ORTHO05D007028 2.1e-21 106.7 104 50.0
Actinidia01057 Actinidia chinensis HOM05D005582 ORTHO05D007028 2.7e-21 106.3 104 51.9
CiPaw.02G071000 Carya illinoinensis HOM05D005582 ORTHO05D007028 2.7e-21 106.3 135 45.2
FAN12G2136 Fragaria x ananassa HOM05D005582 ORTHO05D007028 2.7e-21 106.3 104 51.0
Sed0007110 Sechium edule HOM05D005582 ORTHO05D007028 2.7e-21 106.3 104 48.1
CsaV3_6G000150 Cucumis sativus L. HOM05D005582 ORTHO05D007028 3.5e-21 105.9 104 50.0
CANSAT01G1159 Cannabis sativa HOM05D005582 ORTHO05D007028 4.6e-21 105.5 104 50.0
PGR031G2985 Punica granatum HOM05D005582 ORTHO05D007028 4.6e-21 105.5 102 48.0
Hund12246 Selenicereus undatus HOM05D005582 ORTHO05D007028 4.6e-21 105.5 106 54.7
Thecc.04G310500 Theobroma cacao HOM05D005582 ORTHO05D007028 4.6e-21 105.5 104 51.9
Rhsim04G0247200 Rhododendron simsii HOM05D005582 ORTHO05D007028 6.0e-21 105.1 104 51.9
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 7.8e-21 104.8 104 51.9
Nitab4.5_0004665g0020 Nicotiana tabacum HOM05D005582 ORTHO05D007028 7.8e-21 104.8 135 42.2
ECA246G0223 Erigeron canadensis HOM05D005582 ORTHO05D007028 1.0e-20 104.4 110 50.0
Potri.010G153300 Populus trichocarpa HOM05D005582 ORTHO05D007028 1.0e-20 104.4 137 44.5
vmacro08001 Vaccinium macrocarpon HOM05D005582 ORTHO05D007028 1.0e-20 104.4 104 50.0
Atru.chr11.54 Acer truncatum HOM05D005582 ORTHO05D007028 1.3e-20 104.0 135 42.2
Ciclev10004134m.g Citrus clementina HOM05D005582 ORTHO05D007028 1.3e-20 104.0 104 50.0
Peaxi162Scf01194g00137 Petunia axillaris HOM05D005582 ORTHO05D007028 3.9e-20 102.4 112 50.0
Glyma.10G243400 Glycine max HOM05D005582 ORTHO05D007028 6.6e-20 101.7 104 51.0
Cpa.g.sc146.39 Carica papaya HOM05D005582 ORTHO05D007028 8.6e-20 101.3 136 44.9
Gohir.D09G066800 Gossypium hirsutum HOM05D005582 ORTHO05D007028 8.6e-20 101.3 104 52.9
Gorai.006G081300 Gossypium raimondii HOM05D005582 ORTHO05D007028 8.6e-20 101.3 104 52.9
Oeu022697.1 Olea europaea HOM05D005582 ORTHO05D007028 8.6e-20 101.3 104 50.0
Gohir.A09G067200 Gossypium hirsutum HOM05D005582 ORTHO05D007028 1.1e-19 100.9 104 51.9
Nitab4.5_0000895g0160 Nicotiana tabacum HOM05D005582 ORTHO05D007028 1.1e-19 100.9 135 42.2
HanXRQChr05g0148391 Helianthus annuus HOM05D005582 ORTHO05D007028 3.3e-19 99.4 104 46.2
Phvul.007G062300 Phaseolus vulgaris HOM05D005582 ORTHO05D007028 4.3e-19 99.0 104 50.0
MSTRG.19398 Avicennia marina HOM05D005582 ORTHO05D007028 5.6e-19 98.6 135 43.0
Eucgr.B02209 Eucalyptus grandis HOM05D005582 ORTHO05D007028 7.3e-19 98.2 104 51.0
AUR62029987 Chenopodium quinoa HOM05D005582 ORTHO05D007028 9.6e-19 97.8 104 48.1
Zm00001eb131030 Zea mays HOM05D005582 ORTHO05D007028 9.6e-19 97.8 102 52.9
Glyma.20G150800 Glycine max HOM05D005582 ORTHO05D007028 1.2e-18 97.4 104 50.0
AUR62002565 Chenopodium quinoa HOM05D005582 ORTHO05D007028 2.1e-18 96.7 104 47.1
DCAR_023392 Daucus carota HOM05D005582 ORTHO05D007028 2.8e-18 96.3 104 48.1
DCAR_023431 Daucus carota HOM05D005582 ORTHO05D007028 2.8e-18 96.3 104 48.1
VMungo0720G3059 Vigna mungo HOM05D005582 ORTHO05D007028 2.8e-18 96.3 104 51.0
Ah.07g203770 Amaranthus hybridus HOM05D005582 ORTHO05D007028 3.6e-18 95.9 104 48.1
EL10Ac3g06266 Beta vulgaris HOM05D005582 ORTHO05D007028 3.6e-18 95.9 135 44.4
Lsat_1_v5_gn_6_117861 Lactuca sativa HOM05D001037 ORTHO05D007028 3.6e-18 95.9 104 48.1
Sabra10G0117900 Salix brachista HOM05D005582 ORTHO05D007028 4.7e-18 95.5 137 42.3
CSS0001073 Camellia sinensis var. sinensis HOM05D005582 ORTHO05D007028 1.1e-17 94.4 113 46.0
HPP92_010030 Vanilla planifolia HOM05D005582 ORTHO05D007028 2.4e-17 93.2 133 42.9
THA.LOC104818852 Tarenaya hassleriana HOM05D005582 ORTHO05D007028 3.1e-17 92.8 132 43.2
Solyc12g099010.3 Solanum lycopersicum HOM05D005582 ORTHO05D007028 4.0e-17 92.4 104 48.1
Sopen12g033750 Solanum pennellii HOM05D005582 ORTHO05D007028 4.0e-17 92.4 104 48.1
Migut.N00012 Erythranthe guttata HOM05D005582 ORTHO05D007028 8.9e-17 91.3 104 45.2
Cc03_g00260 Coffea canephora HOM05D005582 ORTHO05D007028 1.5e-16 90.5 135 38.5
Aa31LG11G11190 Aethionema arabicum HOM05D005582 ORTHO05D007028 2.6e-16 89.7 136 43.4
Migut.K01509 Erythranthe guttata HOM05D005582 ORTHO05D007028 7.6e-16 88.2 104 46.2
SGA_v2.0_scaffold227G43203 Striga asiatica HOM05D005582 ORTHO05D007028 1.7e-15 87.0 104 43.3
Manes.15G004000 Manihot esculenta HOM05D005582 ORTHO05D007028 6.4e-15 85.1 102 43.1
unitig_26.g10616 Utricularia gibba HOM05D005582 ORTHO05D007028 6.4e-15 85.1 104 45.2
BcaC04g18671 Brassica carinata HOM05D005582 ORTHO05D007028 1.9e-14 83.6 104 42.3
C09p57960 Brassica napus HOM05D005582 ORTHO05D007028 1.9e-14 83.6 104 42.3
BolC9t58663H Brassica oleracea HOM05D005582 ORTHO05D007028 1.9e-14 83.6 104 42.3
Thhalv10012423m.g Eutrema salsugineum HOM05D005582 ORTHO05D007028 1.9e-14 83.6 104 46.2
BcaB08g36665 Brassica carinata HOM05D005582 ORTHO05D007028 3.2e-14 82.8 104 42.3
BcaB08g36669 Brassica carinata HOM05D005582 ORTHO05D007028 3.2e-14 82.8 104 42.3
Sp6g25800 Schrenkiella parvula HOM05D005582 ORTHO05D007028 5.4e-14 82.0 104 43.3
A10p21030 Brassica napus HOM05D005582 ORTHO05D007028 2.7e-13 79.7 106 41.5
BraA10t44167Z Brassica rapa HOM05D005582 ORTHO05D007028 2.7e-13 79.7 106 41.5
Mapoly0075s0059 Marchantia polymorpha HOM05D005582 ORTHO05D007028 2.7e-13 79.7 116 40.5
Carub.0006s1680 Capsella rubella HOM05D005582 ORTHO05D007028 7.8e-13 78.2 104 43.3
AT5G18525 Arabidopsis thaliana HOM05D005582 ORTHO05D007028 1.3e-12 77.4 104 41.3
SMO203G0276 Selaginella moellendorffii HOM05D005582 ORTHO05D007028 3.9e-12 75.9 104 42.3
Nitab4.5_0006377g0020 Nicotiana tabacum HOM05D002159 ORTHO05D005625 1.5e-11 73.9 81 45.7
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis HOM05D005582 ORTHO05D007028 2.6e-08 63.2 107 34.6
SEGI_29964 Sequoiadendron giganteum HOM05D000557 ORTHO05D007028 2.2e-07 60.1 34 79.4
SEGI_34401 Sequoiadendron giganteum HOM05D003389 ORTHO05D003917 3.2e-06 56.2 50 98.0


User provided reference genes

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