Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 4.8e-150 534.6 267 100.0
SEGI_24148 Sequoiadendron giganteum HOM05D000793 ORTHO05D000783 3.4e-18 96.7 55 85.5
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 1.3e-14 84.7 138 42.0
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 4.2e-13 79.7 143 40.6
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 5.5e-13 79.3 142 38.7
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 7.2e-13 79.0 140 42.1
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 9.5e-13 78.6 146 38.4
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 9.5e-13 78.6 172 31.4
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 2.1e-12 77.4 158 37.3
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 3.6e-12 76.6 114 42.1
SEGI_08709 Sequoiadendron giganteum HOM05D000529 ORTHO05D000472 6.1e-12 75.9 100 51.0
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 1.0e-11 75.1 176 36.4
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 1.0e-11 75.1 170 33.5
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 1.4e-11 74.7 145 36.6
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 1.4e-11 74.7 150 38.0
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 3.0e-11 73.6 142 35.9
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 4.0e-11 73.2 134 38.1
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 5.2e-11 72.8 135 45.9
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 6.8e-11 72.4 128 40.6
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 8.9e-11 72.0 152 33.6
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 8.9e-11 72.0 129 37.2
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 8.9e-11 72.0 134 35.8
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 8.9e-11 72.0 142 38.7
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.5e-10 71.2 143 35.0
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 2.0e-10 70.9 131 38.9
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 2.0e-10 70.9 131 35.1
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 2.6e-10 70.5 142 33.8
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 2.6e-10 70.5 144 34.0
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 3.4e-10 70.1 136 37.5
SEGI_00836 Sequoiadendron giganteum HOM05D004082 ORTHO05D004729 3.4e-10 70.1 55 65.5
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 4.4e-10 69.7 145 33.8
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 5.7e-10 69.3 145 33.8
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 5.7e-10 69.3 135 36.3
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 7.5e-10 68.9 140 36.4
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 9.8e-10 68.6 177 32.2
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 9.8e-10 68.6 159 33.3
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 1.3e-09 68.2 138 35.5
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 1.3e-09 68.2 177 31.1
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 1.3e-09 68.2 144 34.0
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 1.7e-09 67.8 148 32.4
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 2.2e-09 67.4 123 39.0
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 2.2e-09 67.4 171 31.0
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 2.9e-09 67.0 150 33.3
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 2.9e-09 67.0 146 32.9
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 2.9e-09 67.0 137 35.0
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 2.9e-09 67.0 62 51.6
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 2.9e-09 67.0 148 32.4
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 3.7e-09 66.6 131 34.4
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 4.9e-09 66.2 155 33.5
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 6.3e-09 65.9 150 33.3
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 6.3e-09 65.9 143 35.7
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 8.3e-09 65.5 150 30.0
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 8.3e-09 65.5 132 36.4
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.1e-08 65.1 171 29.2
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 1.1e-08 65.1 81 48.1
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 1.8e-08 64.3 131 32.8
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 1.8e-08 64.3 137 32.8
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 1.8e-08 64.3 139 36.0
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 1.8e-08 64.3 160 28.1
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 2.4e-08 63.9 79 41.8
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 2.4e-08 63.9 177 31.1
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 3.2e-08 63.5 158 36.7
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 3.2e-08 63.5 122 36.9
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 4.1e-08 63.2 117 39.3
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.1e-08 63.2 117 39.3
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 4.1e-08 63.2 190 28.4
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 4.1e-08 63.2 190 28.4
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 4.1e-08 63.2 66 54.5
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 5.4e-08 62.8 89 42.7
SEGI_21530 Sequoiadendron giganteum HOM05D002771 ORTHO05D007106 5.4e-08 62.8 50 68.0
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 7.0e-08 62.4 89 42.7
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 7.0e-08 62.4 138 37.0
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 9.2e-08 62.0 143 33.6
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.2e-07 61.6 190 27.9
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 1.2e-07 61.6 150 32.7
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 1.2e-07 61.6 144 31.9
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.2e-07 61.6 138 37.0
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 1.6e-07 61.2 75 40.0
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 1.6e-07 61.2 156 33.3
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 1.6e-07 61.2 183 29.5
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 1.6e-07 61.2 159 34.6
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 1.6e-07 61.2 146 28.8
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 1.6e-07 61.2 119 38.7
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 2.0e-07 60.8 121 34.7
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 2.0e-07 60.8 89 40.4
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 2.7e-07 60.5 138 29.7
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.7e-07 60.5 89 41.6
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 2.7e-07 60.5 120 36.7
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 2.7e-07 60.5 65 50.8
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 2.7e-07 60.5 130 34.6
SEGI_15761 Sequoiadendron giganteum HOM05D002607 ORTHO05D006782 2.7e-07 60.5 32 81.2
SEGI_30751 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 3.5e-07 60.1 45 71.1
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 4.6e-07 59.7 157 29.9
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 4.6e-07 59.7 104 34.6
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 4.6e-07 59.7 102 34.3
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 5.9e-07 59.3 139 31.7
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 5.9e-07 59.3 155 27.7
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 7.8e-07 58.9 156 33.3
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 7.8e-07 58.9 156 33.3
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 7.8e-07 58.9 159 32.1
SEGI_02209 Sequoiadendron giganteum HOM05D002022 ORTHO05D000014 7.8e-07 58.9 49 63.3
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 7.8e-07 58.9 111 34.2
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.0e-06 58.5 92 41.3
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.0e-06 58.5 131 32.8
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 1.0e-06 58.5 173 25.4
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 1.7e-06 57.8 156 32.7
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 1.7e-06 57.8 153 33.3
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 1.7e-06 57.8 62 46.8
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 2.3e-06 57.4 120 35.8
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 2.9e-06 57.0 73 37.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 2.9e-06 57.0 73 37.0
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 2.9e-06 57.0 117 33.3
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 2.9e-06 57.0 104 32.7
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 3.9e-06 56.6 97 33.0
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 5.0e-06 56.2 141 29.8
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 5.0e-06 56.2 114 32.5
SEGI_24341 Sequoiadendron giganteum HOM05D002575 ORTHO05D010935 5.0e-06 56.2 28 89.3
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 8.6e-06 55.5 140 32.1


User provided reference genes

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