Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19915 Sequoiadendron giganteum HOM05D000029 ORTHO05D004317 3.0e-85 318.9 224 100.0
SEGI_05779 Sequoiadendron giganteum HOM05D000029 ORTHO05D004317 5.8e-60 235.0 222 83.3
Mapoly0115s0067 Marchantia polymorpha HOM05D000094 ORTHO05D004317 2.7e-09 66.6 103 38.8
QL03p033358 Quercus lobata HOM05D000029 ORTHO05D002162 1.1e-07 61.2 88 43.2
FvH4_6g01320 Fragaria vesca HOM05D000029 ORTHO05D002162 1.5e-07 60.8 114 36.8
FAN05G3436 Fragaria x ananassa HOM05D000029 ORTHO05D002162 1.5e-07 60.8 113 37.2
FAN05G4349 Fragaria x ananassa HOM05D000029 ORTHO05D002162 1.5e-07 60.8 113 37.2
BcaB05g24436 Brassica carinata HOM05D000094 ORTHO05D002350 2.6e-07 60.1 120 36.7
VMungo0251G0023 Vigna mungo HOM05D000021 ORTHO05D000010 2.6e-07 60.1 119 35.3
Peaxi162Scf00391g00321 Petunia axillaris HOM05D000021 ORTHO05D000010 3.3e-07 59.7 115 33.9
BraA02t06638Z Brassica rapa HOM05D000094 ORTHO05D002350 5.7e-07 58.9 114 37.7
COL.COLO4_33228 Corchorus olitorius HOM05D000029 ORTHO05D002162 9.7e-07 58.2 80 41.2
vmacro21469 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 1.7e-06 57.4 114 35.1
Prupe.1G427700 Prunus persica HOM05D000021 ORTHO05D000010 2.2e-06 57.0 79 34.2
A02p15770 Brassica napus HOM05D000094 ORTHO05D002350 2.8e-06 56.6 114 36.8
Manes.08G090100 Manihot esculenta HOM05D000021 ORTHO05D000010 2.8e-06 56.6 101 32.7
C02p26220 Brassica napus HOM05D000094 ORTHO05D002350 3.7e-06 56.2 120 35.0
BolC2t08688H Brassica oleracea HOM05D000094 ORTHO05D002350 3.7e-06 56.2 120 35.0
CSS0007663 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D006401 3.7e-06 56.2 102 35.3
Duzib106G0010 Durio zibethinus HOM05D000021 ORTHO05D000010 3.7e-06 56.2 141 30.5
Gohir.A10G234550 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.7e-06 56.2 87 37.9
Gohir.D09G196000 Gossypium hirsutum HOM05D000029 ORTHO05D002162 3.7e-06 56.2 81 42.0
Gohir.D10G246608 Gossypium hirsutum HOM05D000021 ORTHO05D000010 3.7e-06 56.2 110 36.4
Gorai.006G219400 Gossypium raimondii HOM05D000029 ORTHO05D002162 3.7e-06 56.2 81 42.0
Nitab4.5_0000010g0270 Nicotiana tabacum HOM05D000021 ORTHO05D000010 3.7e-06 56.2 125 32.8
Potri.001G310700 Populus trichocarpa HOM05D000094 ORTHO05D000455 3.7e-06 56.2 96 37.5
RcHm_v2.0_Chr3g0448891 Rosa chinensis HOM05D000029 ORTHO05D002162 3.7e-06 56.2 113 35.4
Sabra04G0057000 Salix brachista HOM05D000033 ORTHO05D001583 3.7e-06 56.2 109 33.9
BcaC03g15065 Brassica carinata HOM05D000094 ORTHO05D002350 4.8e-06 55.8 120 35.0
A02p23920 Brassica napus HOM05D000029 ORTHO05D002162 4.8e-06 55.8 84 39.3
Carub.0008s0324 Capsella rubella HOM05D000021 ORTHO05D000010 4.8e-06 55.8 82 36.6
Nn2g11444 Nelumbo nucifera HOM05D000021 ORTHO05D000010 4.8e-06 55.8 115 33.9
Potri.005G037400 Populus trichocarpa HOM05D000021 ORTHO05D000010 4.8e-06 55.8 103 34.0
Sabra04G0056900 Salix brachista HOM05D000033 ORTHO05D001583 4.8e-06 55.8 109 33.9
AL4G28730 Arabidopsis lyrata HOM05D000029 ORTHO05D002162 6.3e-06 55.5 86 40.7
BraA02t07384Z Brassica rapa HOM05D000029 ORTHO05D002162 6.3e-06 55.5 84 39.3
Medtr1g047670 Medicago truncatula HOM05D000029 ORTHO05D002162 6.3e-06 55.5 103 34.0
Potri.004G060100 Populus trichocarpa HOM05D000021 ORTHO05D000010 6.3e-06 55.5 114 33.3
TWI53G0118 Tripterygium wilfordii HOM05D000033 ORTHO05D001583 6.3e-06 55.5 106 37.7
vmacro21467 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.3e-06 55.5 79 39.2
MD08G1217600 Malus domestica HOM05D000029 ORTHO05D006810 8.2e-06 55.1 85 37.6


User provided reference genes

Program Settings