Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19911 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 9.7e-65 250.0 125 100.0
SGA_v2.0_scaffold120G32908 Striga asiatica HOM05D003314 ORTHO05D004164 7.0e-39 164.1 98 83.7
ECA248G0301 Erigeron canadensis HOM05D003314 ORTHO05D004164 5.9e-38 161.0 95 84.2
Sed0000995 Sechium edule HOM05D003314 ORTHO05D004164 7.7e-38 160.6 92 88.0
CsaV3_6G016080 Cucumis sativus L. HOM05D003314 ORTHO05D004164 1.0e-37 160.2 95 84.2
Mapoly0056s0097 Marchantia polymorpha HOM05D003314 ORTHO05D004164 1.0e-37 160.2 95 84.2
Potri.001G279100 Populus trichocarpa HOM05D003314 ORTHO05D004164 1.0e-37 160.2 95 84.2
Ah.01g002410 Amaranthus hybridus HOM05D003314 ORTHO05D004164 1.3e-37 159.8 95 83.2
QL01p039122 Quercus lobata HOM05D003314 ORTHO05D004164 1.3e-37 159.8 94 84.0
Duzib150G1198 Durio zibethinus HOM05D003314 ORTHO05D004164 1.7e-37 159.5 98 80.6
Aqoxy4G02458 Aquilegia oxysepala HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
arahy.Tifrunner.gnm1.ann1.99UL3I Arachis hypogaea HOM05D003314 ORTHO05D004164 2.3e-37 159.1 97 81.4
CiPaw.13G074400 Carya illinoinensis HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
CDE06G0062 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
COL.COLO4_11092 Corchorus olitorius HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
FvH4_3g39080 Fragaria vesca HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
FAN21G3397 Fragaria x ananassa HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
FAN25G2774 Fragaria x ananassa HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Gohir.A03G028500 Gossypium hirsutum HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Gohir.D03G140100 Gossypium hirsutum HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Gorai.003G146900 Gossypium raimondii HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Manes.18G141800 Manihot esculenta HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Potri.009G073800 Populus trichocarpa HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
PGR119G0996 Punica granatum HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
RcHm_v2.0_Chr5g0070401 Rosa chinensis HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
SMO244G0010 Selaginella moellendorffii HOM05D003314 ORTHO05D004164 2.3e-37 159.1 90 87.8
Thecc.09G352300 Theobroma cacao HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
TWI31G0289 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
TWI79G1066 Tripterygium wilfordii HOM05D003314 ORTHO05D004164 2.3e-37 159.1 94 84.0
TAR636G0028 Trochodendron aralioides HOM05D003314 ORTHO05D002223 2.3e-37 159.1 95 83.2
TAR636G3324 Trochodendron aralioides HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
GSVIVG01024699001 Vitis vinifera HOM05D003314 ORTHO05D004164 2.3e-37 159.1 95 83.2
Ciclev10027872m.g Citrus clementina HOM05D003314 ORTHO05D004164 2.9e-37 158.7 95 83.2
Haze_24369 Corylus avellana HOM05D003314 ORTHO05D004164 2.9e-37 158.7 95 83.2
DCAR_007359 Daucus carota HOM05D003314 ORTHO05D004164 2.9e-37 158.7 95 82.1
Pp3c16_2340 Physcomitrium patens HOM05D003314 ORTHO05D004164 2.9e-37 158.7 93 84.9
Ca_14964_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 3.8e-37 158.3 95 83.2
Psat5g157680 Pisum sativum HOM05D003314 ORTHO05D004164 3.8e-37 158.3 95 83.2
Atru.chr3.4168 Acer truncatum HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
CSS0022626 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
CSS0049027 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
CANSAT54G2389 Cannabis sativa HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
Lj6g0001244 Lotus japonicus HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
PSO017G4706 Papaver somniferum HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
PSO170G0130 Papaver somniferum HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
vmacro02947 Vaccinium macrocarpon HOM05D003314 ORTHO05D004164 5.0e-37 157.9 95 82.1
Cpa.g.sc2.426 Carica papaya HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 82.1
AUR62025049 Chenopodium quinoa HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 82.1
AUR62041217 Chenopodium quinoa HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 82.1
HanXRQChr01g0011671 Helianthus annuus HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 81.1
Hma1.2p1_1981F.1_g309920 Hydrangea macrophylla HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 82.1
Lsat_1_v5_gn_5_172641 Lactuca sativa HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 81.1
Lj1A130T38 Lonicera japonica HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 81.1
Nn2g10926 Nelumbo nucifera HOM05D003314 ORTHO05D004164 6.5e-37 157.5 95 82.1
Nitab4.5_0000752g0070 Nicotiana tabacum HOM05D003314 ORTHO05D004164 6.5e-37 157.5 92 83.7
Glyma.18G060600 Glycine max HOM05D003314 ORTHO05D004164 8.6e-37 157.1 95 82.1
MD11G1068700 Malus domestica HOM05D003314 ORTHO05D004164 8.6e-37 157.1 95 83.2
Medtr3g464770 Medicago truncatula HOM05D003314 ORTHO05D004164 8.6e-37 157.1 95 83.2
Phvul.006G069900 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 8.6e-37 157.1 95 82.1
Sp1g05820 Schrenkiella parvula HOM05D003314 ORTHO05D004164 8.6e-37 157.1 127 68.5
TPR.G32920 Trifolium pratense HOM05D003314 ORTHO05D004164 8.6e-37 157.1 95 83.2
arahy.Tifrunner.gnm1.ann1.H173G9 Arachis hypogaea HOM05D003314 ORTHO05D004164 1.1e-36 156.8 92 84.8
Cfa011730 Carpinus fangiana HOM05D003314 ORTHO05D004164 1.1e-36 156.8 95 82.1
Lalb_Chr15g0083041 Lupinus albus HOM05D003314 ORTHO05D004164 1.1e-36 156.8 95 82.1
MD03G1064800 Malus domestica HOM05D003314 ORTHO05D004164 1.1e-36 156.8 92 85.9
SalBow2G2371 Salvia bowleyana HOM05D003314 ORTHO05D004164 1.1e-36 156.8 93 82.8
VMungo0540G1658 Vigna mungo HOM05D003314 ORTHO05D004164 1.1e-36 156.8 95 81.1
CDE12G0377 Ceratophyllum demersum HOM05D003314 ORTHO05D004164 1.5e-36 156.4 95 82.1
Cc01_g14510 Coffea canephora HOM05D003314 ORTHO05D004164 1.5e-36 156.4 93 82.8
Nitab4.5_0000839g0080 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.5e-36 156.4 93 82.8
Nitab4.5_0002352g0010 Nicotiana tabacum HOM05D003314 ORTHO05D004164 1.5e-36 156.4 92 83.7
SEGI_28657 Sequoiadendron giganteum HOM05D003314 ORTHO05D004164 1.5e-36 156.4 93 82.8
THA.LOC104800751 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 1.5e-36 156.4 95 81.1
Peaxi162Scf00540g00022 Petunia axillaris HOM05D003314 ORTHO05D004164 1.9e-36 156.0 93 81.7
SGA_v2.0_scaffold146G36142 Striga asiatica HOM05D003314 ORTHO05D004164 1.9e-36 156.0 93 81.7
EL10Ac9g22391 Beta vulgaris HOM05D003314 ORTHO05D004164 2.5e-36 155.6 95 81.1
ECA247G1043 Erigeron canadensis HOM05D003314 ORTHO05D004164 2.5e-36 155.6 95 80.0
Migut.N00780 Erythranthe guttata HOM05D003314 ORTHO05D004164 2.5e-36 155.6 93 81.7
Eucgr.J01899 Eucalyptus grandis HOM05D003314 ORTHO05D004164 2.5e-36 155.6 95 81.1
Prupe.6G053800 Prunus persica HOM05D003314 ORTHO05D004164 2.5e-36 155.6 95 81.1
Sabra09G0055800 Salix brachista HOM05D003314 ORTHO05D004164 2.5e-36 155.6 95 81.1
HanXRQChr08g0229151 Helianthus annuus HOM05D003314 ORTHO05D004164 3.3e-36 155.2 95 80.0
Ca_05629_v3 Cicer arietinum L. HOM05D003314 ORTHO05D004164 4.2e-36 154.8 95 80.0
Glyma.11G169700 Glycine max HOM05D003314 ORTHO05D004164 4.2e-36 154.8 95 81.1
Pp3c21_10950 Physcomitrium patens HOM05D003314 ORTHO05D004164 4.2e-36 154.8 93 80.6
Psat2g055960 Pisum sativum HOM05D003314 ORTHO05D004164 4.2e-36 154.8 95 78.9
CAN.G1095.9 Capsicum annuum HOM05D003314 ORTHO05D004164 5.5e-36 154.5 93 80.6
Pp3c25_1530 Physcomitrium patens HOM05D003314 ORTHO05D004164 5.5e-36 154.5 90 84.4
Solyc06g082150.4 Solanum lycopersicum HOM05D003314 ORTHO05D004164 5.5e-36 154.5 93 80.6
Sopen06g033530 Solanum pennellii HOM05D003314 ORTHO05D004164 5.5e-36 154.5 93 80.6
PGSC0003DMG400030370 Solanum tuberosum HOM05D003314 ORTHO05D004164 5.5e-36 154.5 93 80.6
MSTRG.12679 Avicennia marina HOM05D003314 ORTHO05D004164 7.2e-36 154.1 93 80.6
TAR623G0703 Trochodendron aralioides HOM05D003314 ORTHO05D004164 7.2e-36 154.1 95 82.1
CSS0023090 Camellia sinensis var. sinensis HOM05D003314 ORTHO05D004164 9.5e-36 153.7 95 80.0
Medtr5g071900 Medicago truncatula HOM05D003314 ORTHO05D004164 9.5e-36 153.7 95 77.9
Pp3c19_20300 Physcomitrium patens HOM05D003314 ORTHO05D004164 9.5e-36 153.7 95 77.9
Zm00001eb013550 Zea mays HOM05D003314 ORTHO05D004164 9.5e-36 153.7 94 80.9
AL1G17230 Arabidopsis lyrata HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
AT1G07110 Arabidopsis thaliana HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
Carub.0001s0639 Capsella rubella HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
CARHR006800 Cardamine hirsuta HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
Thhalv10006901m.g Eutrema salsugineum HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
THA.LOC104815810 Tarenaya hassleriana HOM05D003314 ORTHO05D004164 1.2e-35 153.3 95 80.0
Zm00001eb282250 Zea mays HOM05D003314 ORTHO05D004164 1.2e-35 153.3 92 83.7
AagrBONN_evm.TU.Sc2ySwM_117.3149 Anthoceros agrestis HOM05D003314 ORTHO05D004164 1.6e-35 152.9 93 79.6
MBI15_g29380_MAGBIO Magnolia biondii HOM05D003314 ORTHO05D004164 1.6e-35 152.9 100 79.0
Os05g0164100 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 1.6e-35 152.9 92 83.7
arahy.Tifrunner.gnm1.ann1.UVU1B7 Arachis hypogaea HOM05D003314 ORTHO05D004164 2.1e-35 152.5 95 77.9
BcaC05g24676 Brassica carinata HOM05D003314 ORTHO05D004164 2.1e-35 152.5 92 82.6
A10p05630 Brassica napus HOM05D003314 ORTHO05D004164 2.1e-35 152.5 92 82.6
C05p05170 Brassica napus HOM05D003314 ORTHO05D004164 2.1e-35 152.5 92 82.6
BolC5t29289H Brassica oleracea HOM05D003314 ORTHO05D004164 2.1e-35 152.5 92 82.6
Oeu051518.1 Olea europaea HOM05D003314 ORTHO05D004164 2.1e-35 152.5 95 77.9
TPR.G5069 Trifolium pratense HOM05D003314 ORTHO05D004164 2.1e-35 152.5 93 78.5
unitig_60.g25552 Utricularia gibba HOM05D003314 ORTHO05D004164 2.1e-35 152.5 93 79.6
HPP92_013781 Vanilla planifolia HOM05D003314 ORTHO05D004164 2.1e-35 152.5 95 81.1
arahy.Tifrunner.gnm1.ann1.Y0JIV8 Arachis hypogaea HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 76.8
BcaB03g13407 Brassica carinata HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 78.9
A08p35790 Brassica napus HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 78.9
C08p02820 Brassica napus HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 78.9
BolC8t47077H Brassica oleracea HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 78.9
BraA08t35486Z Brassica rapa HOM05D003314 ORTHO05D004164 2.8e-35 152.1 95 78.9
LjContig00141g0002673 Lotus japonicus HOM05D003314 ORTHO05D004164 3.6e-35 151.8 95 77.9
Lj2A1086T64 Lonicera japonica HOM05D003314 ORTHO05D004164 4.7e-35 151.4 101 78.2
Aa31LG1G6350 Aethionema arabicum HOM05D003314 ORTHO05D004164 6.1e-35 151.0 95 78.9
CiPaw.14G057100 Carya illinoinensis HOM05D003314 ORTHO05D004164 6.1e-35 151.0 95 80.0
MELO3C026830.2 Cucumis melo HOM05D003314 ORTHO05D004164 6.1e-35 151.0 84 88.1
BcaC07g42027 Brassica carinata HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 78.9
A09p66600 Brassica napus HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 78.9
C08p50810 Brassica napus HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 78.9
BolC8t52609H Brassica oleracea HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 78.9
BraA09t42000Z Brassica rapa HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 78.9
Lsat_1_v5_gn_9_19140 Lactuca sativa HOM05D003314 ORTHO05D004164 8.0e-35 150.6 95 77.9
Os03g0294200 Oryza sativa ssp. japonica HOM05D003314 ORTHO05D004164 8.0e-35 150.6 94 78.7
Dinv09644 Davidia involucrata HOM05D003314 ORTHO05D004164 1.4e-34 149.8 84 86.9
MSTRG.17878 Avicennia marina HOM05D003314 ORTHO05D004164 1.8e-34 149.4 90 82.2
SMO174G0065 Selaginella moellendorffii HOM05D003314 ORTHO05D004164 1.8e-34 149.4 93 76.3
Lalb_Chr17g0345221 Lupinus albus HOM05D003314 ORTHO05D004164 5.2e-34 147.9 92 79.3
Glyma.02G228700 Glycine max HOM05D003314 ORTHO05D004164 1.2e-33 146.7 95 76.8
Glyma.14G195700 Glycine max HOM05D003314 ORTHO05D004164 1.2e-33 146.7 95 76.8
Phvul.008G259400 Phaseolus vulgaris HOM05D003314 ORTHO05D004164 1.2e-33 146.7 95 76.8
ATR0681G099 Amborella trichopoda HOM05D003314 ORTHO05D004164 1.5e-33 146.4 88 81.8
Rhsim13G0067500 Rhododendron simsii HOM05D003314 ORTHO05D004164 9.5e-28 127.1 70 87.1
Duzib168G0330 Durio zibethinus HOM05D003314 ORTHO05D004164 3.6e-27 125.2 69 89.9
PRCOL_00004422 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 9.8e-25 117.1 91 61.5
Actinidia32630 Actinidia chinensis HOM05D003314 ORTHO05D004164 1.7e-24 116.3 80 73.8
ClCG02G019450 Citrullus lanatus HOM05D003314 ORTHO05D004164 3.7e-24 115.2 69 84.1
Cre16.g691888 Chlamydomonas reinhardtii HOM05D003314 ORTHO05D004164 1.9e-23 112.8 78 66.7
Cre16.g652150 Chlamydomonas reinhardtii HOM05D003314 ORTHO05D004164 3.9e-21 105.1 81 60.5
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 6.2e-19 97.8 80 55.0
Haze_27150 Corylus avellana HOM05D003314 ORTHO05D004164 5.2e-18 94.7 75 62.7
BraA10t42824Z Brassica rapa HOM05D003314 ORTHO05D004164 7.5e-17 90.9 173 39.3
Cfa025454 Carpinus fangiana HOM05D003314 ORTHO05D004164 1.9e-15 86.3 91 47.3
Dinv28665 Davidia involucrata HOM05D003314 ORTHO05D004164 4.1e-15 85.1 47 87.2
MCO01G554 Micromonas commoda HOM05D003314 ORTHO05D004164 3.5e-14 82.0 76 50.0
MCO04G290 Micromonas commoda HOM05D003314 ORTHO05D004164 7.3e-12 74.3 83 39.8
Cfa024020 Carpinus fangiana HOM05D003314 ORTHO05D004164 4.7e-11 71.6 95 40.0
Cfa026335 Carpinus fangiana HOM05D003314 ORTHO05D004164 2.3e-10 69.3 89 42.7
PSO302G0047 Papaver somniferum HOM05D003314 ORTHO05D004164 3.4e-09 65.5 55 67.3
HanXRQChr13g0399511 Helianthus annuus HOM05D006254 ORTHO05D007409 9.9e-09 63.9 47 63.8


User provided reference genes

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