Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.8e-60 234.2 110 100.0
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.6e-55 219.2 106 96.2
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.8e-45 184.1 106 79.2
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 2.4e-43 178.7 105 81.0
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 3.2e-43 178.3 105 81.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 3.2e-43 178.3 105 80.0
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.4e-43 177.6 105 78.1
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 7.0e-43 177.2 106 77.4
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 2.0e-42 175.6 105 77.1
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.7e-42 175.3 106 74.5
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 3.5e-42 174.9 106 77.4
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 3.5e-42 174.9 105 76.2
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 4.6e-42 174.5 105 77.1
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 4.6e-42 174.5 105 77.1
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 4.6e-42 174.5 105 77.1
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 6.0e-42 174.1 106 74.5
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 7.8e-42 173.7 105 77.1
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 7.8e-42 173.7 105 76.2
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 1.0e-41 173.3 106 75.5
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.0e-41 173.3 106 75.5
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.0e-41 173.3 106 75.5
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.0e-41 173.3 106 75.5
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.0e-41 173.3 105 76.2
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 1.3e-41 172.9 105 78.1
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-41 172.9 105 77.1
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.7e-41 172.6 106 75.5
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.7e-41 172.6 106 75.5
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 1.7e-41 172.6 105 77.1
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.3e-41 172.2 105 76.2
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.3e-41 172.2 105 75.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 2.3e-41 172.2 105 75.2
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 2.3e-41 172.2 105 75.2
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.3e-41 172.2 105 75.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 2.3e-41 172.2 106 75.5
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 3.0e-41 171.8 105 75.2
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 3.0e-41 171.8 105 76.2
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 3.0e-41 171.8 105 77.1
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.9e-41 171.4 105 76.2
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 3.9e-41 171.4 105 76.2
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.9e-41 171.4 105 74.3
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 5.0e-41 171.0 106 74.5
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 6.6e-41 170.6 105 76.2
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 6.6e-41 170.6 105 75.2
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 8.6e-41 170.2 105 77.1
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 8.6e-41 170.2 105 75.2
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 1.1e-40 169.9 106 73.6
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.5e-40 169.5 105 74.3
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.5e-40 169.5 105 74.3
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 1.5e-40 169.5 105 74.3
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 1.5e-40 169.5 105 75.2
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.9e-40 169.1 105 73.3
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.9e-40 169.1 106 78.3
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 2.5e-40 168.7 106 73.6
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 4.3e-40 167.9 104 75.0
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 5.6e-40 167.5 105 72.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 5.6e-40 167.5 106 72.6
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 7.3e-40 167.2 106 68.9
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 7.3e-40 167.2 105 73.3
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 7.3e-40 167.2 105 73.3
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 7.3e-40 167.2 105 72.4
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 7.3e-40 167.2 106 73.6
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 9.5e-40 166.8 105 76.2
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 9.5e-40 166.8 105 74.3
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 9.5e-40 166.8 105 73.3
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 1.6e-39 166.0 105 73.3
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.1e-39 165.6 105 71.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.1e-39 165.6 105 72.4
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.1e-39 165.6 105 72.4
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 3.6e-39 164.9 105 73.3
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 3.6e-39 164.9 92 82.6
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 4.7e-39 164.5 114 70.2
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 4.7e-39 164.5 104 72.1
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 6.2e-39 164.1 106 71.7
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 6.2e-39 164.1 105 72.4
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 8.0e-39 163.7 105 73.3
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 8.0e-39 163.7 104 74.0
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 1.1e-38 163.3 105 71.4
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.1e-38 163.3 105 70.5
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.1e-38 163.3 99 72.7
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 1.4e-38 162.9 104 73.1
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.3e-38 162.2 139 60.4
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.3e-38 162.2 105 70.5
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 4.0e-38 161.4 95 75.8
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 2.6e-37 158.7 106 70.8
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 5.8e-37 157.5 133 60.9
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 7.5e-37 157.1 105 70.5
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 9.8e-37 156.8 92 73.9
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 2.2e-36 155.6 104 68.3
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 9.2e-35 150.2 105 67.6
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 2.1e-34 149.1 105 67.6
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.0e-33 146.7 84 78.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 8.1e-31 137.1 105 60.0
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 1.4e-30 136.3 81 76.5
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 7.5e-29 130.6 105 61.0
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.2e-26 123.2 72 79.2
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 4.6e-26 121.3 72 79.2
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 7.8e-26 120.6 105 57.1
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.0e-25 118.6 72 77.8
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 3.3e-24 115.2 102 55.9
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.6e-23 112.8 67 77.6
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.0e-22 108.2 105 52.4
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 4.0e-22 108.2 105 52.4
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 1.1e-19 100.1 106 49.1
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 2.4e-19 99.0 72 66.7
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.2e-18 96.7 64 68.8
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.5e-16 89.0 67 58.2
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 3.6e-15 85.1 105 45.7
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 4.0e-14 81.6 67 59.7
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 4.8e-07 58.2 82 42.7


User provided reference genes

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