Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19854 Sequoiadendron giganteum HOM05D000335 ORTHO05D000459 2.3e-93 345.5 166 100.0
SEGI_34894 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.8e-16 89.0 52 82.7
SEGI_15157 Sequoiadendron giganteum HOM05D000335 ORTHO05D000459 2.2e-11 73.2 60 58.3
SEGI_03192 Sequoiadendron giganteum HOM05D000335 ORTHO05D000459 9.1e-10 67.8 60 55.0
Eucgr.C02837 Eucalyptus grandis HOM05D000335 ORTHO05D000459 5.9e-09 65.1 97 40.2
PSO017G2947 Papaver somniferum HOM05D000335 ORTHO05D000459 1.7e-08 63.5 60 50.0
PSO170G6323 Papaver somniferum HOM05D000335 ORTHO05D000459 2.2e-08 63.2 60 50.0
SEGI_36750 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.8e-08 62.4 51 64.7
Pp3c11_11790 Physcomitrium patens HOM05D000335 ORTHO05D000459 5.0e-08 62.0 53 56.6
Aqoxy5G01672 Aquilegia oxysepala HOM05D000335 ORTHO05D000459 1.1e-07 60.8 45 55.6
Os03g0162000 Oryza sativa ssp. japonica HOM05D000335 ORTHO05D000459 1.1e-07 60.8 55 47.3
CAN.G199.31 Capsicum annuum HOM05D000335 ORTHO05D000459 1.4e-07 60.5 52 53.8
Sed0008429 Sechium edule HOM05D000335 ORTHO05D000459 1.4e-07 60.5 126 35.7
SEGI_28513 Sequoiadendron giganteum HOM05D000335 ORTHO05D000459 1.4e-07 60.5 51 49.0
Solyc06g065630.3 Solanum lycopersicum HOM05D000335 ORTHO05D000459 1.4e-07 60.5 52 53.8
Sopen06g024050 Solanum pennellii HOM05D000335 ORTHO05D000459 1.4e-07 60.5 52 53.8
Zm00001eb119530 Zea mays HOM05D000335 ORTHO05D000459 1.4e-07 60.5 79 41.8
Medtr1g011630 Medicago truncatula HOM05D000335 ORTHO05D000459 2.5e-07 59.7 53 52.8
HPP92_002906 Vanilla planifolia HOM05D000335 ORTHO05D000459 2.5e-07 59.7 49 53.1
Lj8A612T15 Lonicera japonica HOM05D000335 ORTHO05D000459 3.2e-07 59.3 60 46.7
MBI01_g06512_MAGBIO Magnolia biondii HOM05D000335 ORTHO05D000459 3.2e-07 59.3 52 50.0
TAR381G1027 Trochodendron aralioides HOM05D000335 ORTHO05D000459 3.2e-07 59.3 44 59.1
ClCG08G012980 Citrullus lanatus HOM05D000335 ORTHO05D000459 4.2e-07 58.9 61 47.5
CsaV3_2G031710 Cucumis sativus L. HOM05D000335 ORTHO05D000459 4.2e-07 58.9 60 48.3
PSO675G6177 Papaver somniferum HOM05D000335 ORTHO05D000459 4.2e-07 58.9 81 39.5
SalBow8G0338 Salvia bowleyana HOM05D000335 ORTHO05D000459 4.2e-07 58.9 62 46.8
SalBow8G0503 Salvia bowleyana HOM05D000335 ORTHO05D000459 4.2e-07 58.9 62 46.8
arahy.Tifrunner.gnm1.ann1.6PM354 Arachis hypogaea HOM05D000335 ORTHO05D000459 5.5e-07 58.5 53 50.9
arahy.Tifrunner.gnm1.ann1.CQB9JC Arachis hypogaea HOM05D000335 ORTHO05D000459 5.5e-07 58.5 53 50.9
Glyma.17G205800 Glycine max HOM05D000335 ORTHO05D000459 5.5e-07 58.5 53 50.9
Sed0012348 Sechium edule HOM05D000335 ORTHO05D000459 5.5e-07 58.5 51 52.9
ATR0665G592 Amborella trichopoda HOM05D000335 ORTHO05D000459 7.2e-07 58.2 44 54.5
CANSAT25G3077 Cannabis sativa HOM05D000335 ORTHO05D000459 7.2e-07 58.2 60 45.0
MELO3C011221.2 Cucumis melo HOM05D000335 ORTHO05D000459 7.2e-07 58.2 58 46.6
Nn1g05065 Nelumbo nucifera HOM05D000335 ORTHO05D000459 7.2e-07 58.2 52 51.9
Oeu032494.1 Olea europaea HOM05D000335 ORTHO05D000459 7.2e-07 58.2 60 46.7
PSO541G5679 Papaver somniferum HOM05D000335 ORTHO05D000459 7.2e-07 58.2 81 39.5
Phvul.001G054600 Phaseolus vulgaris HOM05D000335 ORTHO05D000459 7.2e-07 58.2 53 50.9
QL12p031522 Quercus lobata HOM05D000335 ORTHO05D000459 7.2e-07 58.2 60 46.7
TPR.G20099 Trifolium pratense HOM05D000335 ORTHO05D000459 7.2e-07 58.2 53 50.9
TAR381G1419 Trochodendron aralioides HOM05D000335 ORTHO05D000459 7.2e-07 58.2 44 59.1
HPP92_003936 Vanilla planifolia HOM05D000335 ORTHO05D000459 7.2e-07 58.2 52 46.2
AUR62024856 Chenopodium quinoa HOM05D000335 ORTHO05D000459 9.4e-07 57.8 52 48.1
Ca_12917_v3 Cicer arietinum L. HOM05D000335 ORTHO05D000459 9.4e-07 57.8 53 50.9
Dinv11592 Davidia involucrata HOM05D000335 ORTHO05D000459 9.4e-07 57.8 60 46.7
VMungo0647G0283 Vigna mungo HOM05D000335 ORTHO05D000459 9.4e-07 57.8 53 50.9
Actinidia14634 Actinidia chinensis HOM05D000335 ORTHO05D000459 1.2e-06 57.4 60 46.7
Dinv30199 Davidia involucrata HOM05D000335 ORTHO05D000459 1.2e-06 57.4 60 46.7
Lj7A714T54 Lonicera japonica HOM05D000335 ORTHO05D000459 1.2e-06 57.4 52 50.0
Lj5g0004059 Lotus japonicus HOM05D000335 ORTHO05D000459 1.2e-06 57.4 53 50.9
TWI34G1579 Tripterygium wilfordii HOM05D000335 ORTHO05D000459 1.2e-06 57.4 60 46.7
HPP92_002887 Vanilla planifolia HOM05D000335 ORTHO05D000459 1.2e-06 57.4 44 56.8
Cfa013204 Carpinus fangiana HOM05D000335 ORTHO05D000459 1.6e-06 57.0 60 46.7
Lalb_Chr14g0361961 Lupinus albus HOM05D000335 ORTHO05D000459 1.6e-06 57.0 51 49.0
Psat6g030600 Pisum sativum HOM05D000335 ORTHO05D000459 1.6e-06 57.0 53 49.1
SalBow4G1381 Salvia bowleyana HOM05D000335 ORTHO05D000459 1.6e-06 57.0 60 45.0
Sp7g30320 Schrenkiella parvula HOM05D000335 ORTHO05D000459 1.6e-06 57.0 52 48.1
TWI63G0897 Tripterygium wilfordii HOM05D000335 ORTHO05D000459 1.6e-06 57.0 60 46.7
vmacro11127 Vaccinium macrocarpon HOM05D000335 ORTHO05D000459 1.6e-06 57.0 52 51.9
Zm00001eb031030 Zea mays HOM05D000335 ORTHO05D000459 1.6e-06 57.0 79 40.5
Zm00001eb158550 Zea mays HOM05D000335 ORTHO05D000459 1.6e-06 57.0 90 38.9
Zm00001eb264510 Zea mays HOM05D000335 ORTHO05D000459 1.6e-06 57.0 54 46.3
Atru.chr7.1351 Acer truncatum HOM05D000335 ORTHO05D000459 2.1e-06 56.6 44 54.5
Haze_21611 Corylus avellana HOM05D000335 ORTHO05D000459 2.1e-06 56.6 60 45.0
Os01g0224700 Oryza sativa ssp. japonica HOM05D000335 ORTHO05D000459 2.1e-06 56.6 44 52.3
Actinidia13277 Actinidia chinensis HOM05D000335 ORTHO05D000459 2.7e-06 56.2 60 46.7
CDE01G0202 Ceratophyllum demersum HOM05D000335 ORTHO05D000459 2.7e-06 56.2 52 51.9
Hma1.2p1_0320F.1_g123950 Hydrangea macrophylla HOM05D000335 ORTHO05D000459 2.7e-06 56.2 52 51.9
MBI01_g23467_MAGBIO Magnolia biondii HOM05D000335 ORTHO05D000459 2.7e-06 56.2 52 51.9
TAR625G0560 Trochodendron aralioides HOM05D000335 ORTHO05D000459 2.7e-06 56.2 44 56.8
unitig_747.g21883 Utricularia gibba HOM05D000335 ORTHO05D000459 2.7e-06 56.2 52 48.1
GSVIVG01035788001 Vitis vinifera HOM05D000335 ORTHO05D000459 2.7e-06 56.2 60 46.7
Zm00001eb004710 Zea mays HOM05D000335 ORTHO05D000459 2.7e-06 56.2 56 48.2
Actinidia15704 Actinidia chinensis HOM05D000335 ORTHO05D000459 3.6e-06 55.8 60 45.0
Eucgr.C01808 Eucalyptus grandis HOM05D000335 ORTHO05D000459 3.6e-06 55.8 52 51.9
Peaxi162Scf00075g02122 Petunia axillaris HOM05D000335 ORTHO05D000459 3.6e-06 55.8 52 50.0
Sc18g0001220 Simmondsia chinensis HOM05D000335 ORTHO05D000459 3.6e-06 55.8 52 50.0
TAR626G1220 Trochodendron aralioides HOM05D000335 ORTHO05D000459 3.6e-06 55.8 60 45.0
HPP92_020164 Vanilla planifolia HOM05D000335 ORTHO05D000459 3.6e-06 55.8 52 50.0
HPP92_020171 Vanilla planifolia HOM05D000335 ORTHO05D000459 3.6e-06 55.8 52 50.0
Actinidia29312 Actinidia chinensis HOM05D000335 ORTHO05D000459 4.7e-06 55.5 53 50.9
AL6G21960 Arabidopsis lyrata HOM05D000335 ORTHO05D000459 4.7e-06 55.5 45 53.3
AUR62032364 Chenopodium quinoa HOM05D000335 ORTHO05D000459 4.7e-06 55.5 52 46.2
COL.COLO4_24032 Corchorus olitorius HOM05D000335 ORTHO05D000459 4.7e-06 55.5 60 45.0
Duzib150G0106 Durio zibethinus HOM05D000335 ORTHO05D000459 4.7e-06 55.5 60 43.3
FAN24G0015 Fragaria x ananassa HOM05D000335 ORTHO05D000459 4.7e-06 55.5 52 50.0
Glyma.14G128200 Glycine max HOM05D000335 ORTHO05D000459 4.7e-06 55.5 53 47.2
Os12g0512000 Oryza sativa ssp. japonica HOM05D000335 ORTHO05D000459 4.7e-06 55.5 53 43.4
Phvul.009G096500 Phaseolus vulgaris HOM05D000335 ORTHO05D000459 4.7e-06 55.5 81 38.3
SpUn0348_0010 Schrenkiella parvula HOM05D000335 ORTHO05D000459 4.7e-06 55.5 53 45.3
SpUn0510_0010 Schrenkiella parvula HOM05D000335 ORTHO05D000459 4.7e-06 55.5 53 45.3
TAR383G0694 Trochodendron aralioides HOM05D000335 ORTHO05D000459 4.7e-06 55.5 60 43.3
Thhalv10016084m.g Eutrema salsugineum HOM05D000335 ORTHO05D000459 6.1e-06 55.1 52 44.2
FvH4_2g29930 Fragaria vesca HOM05D000335 ORTHO05D000459 6.1e-06 55.1 60 43.3
FAN20G1384 Fragaria x ananassa HOM05D000335 ORTHO05D000459 6.1e-06 55.1 60 43.3
FAN27G0307 Fragaria x ananassa HOM05D000335 ORTHO05D000459 6.1e-06 55.1 60 43.3
Lalb_Chr22g0361601 Lupinus albus HOM05D000335 ORTHO05D000459 6.1e-06 55.1 51 47.1
Nn2g11860 Nelumbo nucifera HOM05D000335 ORTHO05D000459 6.1e-06 55.1 52 50.0
SEGI_11306 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 6.1e-06 55.1 55 56.4
PGSC0003DMG400026087 Solanum tuberosum HOM05D000335 ORTHO05D000459 6.1e-06 55.1 43 53.5
TAR625G0580 Trochodendron aralioides HOM05D000335 ORTHO05D000459 6.1e-06 55.1 60 45.0
A10p26410 Brassica napus HOM05D000335 ORTHO05D000459 7.9e-06 54.7 53 43.4
BraA10t44698Z Brassica rapa HOM05D000335 ORTHO05D000459 7.9e-06 54.7 53 43.4
AUR62010996 Chenopodium quinoa HOM05D000335 ORTHO05D000459 7.9e-06 54.7 44 54.5
ClCG08G012390 Citrullus lanatus HOM05D000335 ORTHO05D000459 7.9e-06 54.7 52 44.2
Nn5g29544 Nelumbo nucifera HOM05D000335 ORTHO05D000459 7.9e-06 54.7 44 54.5
Nitab4.5_0003128g0050 Nicotiana tabacum HOM05D000335 ORTHO05D000459 7.9e-06 54.7 60 45.0
Hund03007 Selenicereus undatus HOM05D000335 ORTHO05D000459 7.9e-06 54.7 52 48.1
vmacro05219 Vaccinium macrocarpon HOM05D000335 ORTHO05D000459 7.9e-06 54.7 60 45.0


User provided reference genes

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