Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19848 Sequoiadendron giganteum HOM05D008117 ORTHO05D010265 7.6e-68 260.4 133 100.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.4e-08 63.5 73 50.7
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 2.3e-08 62.8 61 57.4
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 3.1e-08 62.4 61 55.7
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 3.1e-08 62.4 61 60.7
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 5.2e-08 61.6 71 50.7
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 8.9e-08 60.8 61 55.7
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 8.9e-08 60.8 60 56.7
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 8.9e-08 60.8 60 55.0
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.5e-07 60.1 68 50.0
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 2.0e-07 59.7 60 55.0
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.0e-07 59.7 68 48.5
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 2.6e-07 59.3 70 47.1
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 2.6e-07 59.3 70 50.0
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 3.4e-07 58.9 61 55.7
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 3.4e-07 58.9 61 54.1
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 4.4e-07 58.5 61 52.5
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 5.8e-07 58.2 61 54.1
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 5.8e-07 58.2 61 54.1
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 5.8e-07 58.2 60 56.7
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 9.8e-07 57.4 62 48.4
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 1.3e-06 57.0 61 52.5
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 1.3e-06 57.0 62 53.2
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 1.3e-06 57.0 58 51.7
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 1.3e-06 57.0 61 55.7
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 1.7e-06 56.6 62 53.2
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 1.7e-06 56.6 75 46.7
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 2.2e-06 56.2 51 52.9
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 2.9e-06 55.8 61 50.8
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.9e-06 55.8 57 52.6
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 2.9e-06 55.8 71 43.7
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 3.7e-06 55.5 62 46.8
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 3.7e-06 55.5 60 51.7
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 3.7e-06 55.5 59 52.5
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 4.9e-06 55.1 64 48.4
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 4.9e-06 55.1 60 51.7
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 6.4e-06 54.7 63 50.8
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 6.4e-06 54.7 65 50.8
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 6.4e-06 54.7 65 50.8
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 8.3e-06 54.3 61 49.2
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 8.3e-06 54.3 62 46.8


User provided reference genes

Program Settings