Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 2.1e-76 288.9 139 100.0
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 7.8e-23 110.9 88 60.2
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.9e-21 106.3 112 51.8
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 4.3e-21 105.1 85 60.0
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 4.3e-21 105.1 85 58.8
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.6e-21 104.8 85 58.8
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 5.6e-21 104.8 85 61.2
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 7.3e-21 104.4 85 60.0
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 9.6e-21 104.0 85 57.6
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 9.6e-21 104.0 85 63.5
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 1.2e-20 103.6 85 61.2
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 1.2e-20 103.6 84 60.7
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.6e-20 103.2 85 60.0
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.6e-20 103.2 85 62.4
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 2.1e-20 102.8 85 62.4
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 2.1e-20 102.8 85 58.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 2.1e-20 102.8 85 58.8
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 2.1e-20 102.8 85 62.4
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 2.1e-20 102.8 85 60.0
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 2.1e-20 102.8 85 60.0
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.8e-20 102.4 85 57.6
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 2.8e-20 102.4 85 57.6
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 2.8e-20 102.4 84 64.3
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.6e-20 102.1 85 56.5
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 3.6e-20 102.1 84 63.1
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.6e-20 102.1 85 56.5
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 3.6e-20 102.1 85 57.6
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 3.6e-20 102.1 85 58.8
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 3.6e-20 102.1 85 61.2
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 4.7e-20 101.7 84 61.9
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 4.7e-20 101.7 85 58.8
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 4.7e-20 101.7 85 58.8
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 6.2e-20 101.3 85 58.8
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 6.2e-20 101.3 84 61.9
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.1e-19 100.5 106 49.1
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 1.1e-19 100.5 85 57.6
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.1e-19 100.5 85 56.5
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 1.1e-19 100.5 83 59.0
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.4e-19 100.1 85 60.0
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.4e-19 100.1 85 60.0
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 1.4e-19 100.1 83 60.2
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.8e-19 99.8 85 55.3
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.8e-19 99.8 85 60.0
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 2.4e-19 99.4 85 57.6
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 3.1e-19 99.0 86 59.3
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 3.1e-19 99.0 84 57.1
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.1e-19 99.0 85 55.3
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 4.0e-19 98.6 85 52.9
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 4.0e-19 98.6 84 58.3
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 4.0e-19 98.6 84 58.3
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 6.8e-19 97.8 85 58.8
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 6.8e-19 97.8 84 56.0
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 8.9e-19 97.4 85 54.1
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 8.9e-19 97.4 85 54.1
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 8.9e-19 97.4 85 56.5
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 1.2e-18 97.1 84 58.3
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 1.2e-18 97.1 106 50.0
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.2e-18 97.1 85 55.3
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 1.2e-18 97.1 85 52.9
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.5e-18 96.7 86 55.8
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.5e-18 96.7 85 54.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-18 96.3 85 56.5
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-18 96.3 85 56.5
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-18 96.3 85 56.5
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 2.6e-18 95.9 85 54.1
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 2.6e-18 95.9 85 56.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.6e-18 95.9 85 55.3
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 3.4e-18 95.5 85 56.5
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 3.4e-18 95.5 85 55.3
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 4.4e-18 95.1 85 51.8
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 4.4e-18 95.1 85 56.5
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 4.4e-18 95.1 85 56.5
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 4.4e-18 95.1 85 56.5
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 4.4e-18 95.1 84 60.7
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 4.4e-18 95.1 85 55.3
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 7.6e-18 94.4 86 54.7
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 7.6e-18 94.4 85 54.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 7.6e-18 94.4 85 55.3
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 9.9e-18 94.0 86 53.5
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 9.9e-18 94.0 85 55.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.7e-17 93.2 86 53.5
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.7e-17 93.2 85 54.1
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.7e-17 93.2 85 52.9
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.9e-17 92.4 85 52.9
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.9e-17 92.4 85 54.1
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 4.9e-17 91.7 85 52.9
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 4.9e-17 91.7 88 51.1
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 8.4e-17 90.9 85 49.4
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.4e-16 90.1 85 51.8
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.4e-16 90.1 85 56.5
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.9e-16 89.7 111 42.3
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 1.9e-16 89.7 86 50.0
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.9e-16 89.7 83 54.2
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 2.4e-16 89.4 86 50.0
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.4e-16 89.4 85 51.8
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 3.2e-16 89.0 85 51.8
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 4.2e-16 88.6 86 50.0
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 4.2e-16 88.6 85 54.1
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 7.1e-16 87.8 84 50.0
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.7e-15 85.9 111 41.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 3.5e-15 85.5 86 48.8
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 3.5e-15 85.5 86 48.8
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.0e-14 82.4 83 48.2
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 6.6e-14 81.3 75 56.0
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 4.3e-13 78.6 71 56.3
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.6e-12 76.6 71 56.3
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 2.1e-12 76.3 85 43.5
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 4.0e-11 72.0 44 72.7
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 4.4e-10 68.6 44 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 9.9e-10 67.4 83 43.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.3e-09 67.0 83 39.8
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.7e-09 66.6 85 40.0
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 4.9e-09 65.1 44 63.6
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.9e-08 63.2 88 36.4
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 3.2e-08 62.4 54 48.1
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 3.5e-07 58.9 58 53.4


User provided reference genes

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