Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19761 Sequoiadendron giganteum HOM05D041656 ORTHO05D009873 5.0e-190 667.5 323 100.0
SEGI_28857 Sequoiadendron giganteum HOM05D041656 ORTHO05D009873 3.5e-167 591.7 286 100.0
SEGI_08843 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 2.1e-26 124.0 68 83.8
SEGI_21520 Sequoiadendron giganteum HOM05D001284 ORTHO05D001177 1.9e-16 90.9 67 65.7
SEGI_25252 Sequoiadendron giganteum HOM05D001284 ORTHO05D001177 5.1e-09 66.2 60 43.3
SGA_v2.0_scaffold63G21708 Striga asiatica HOM05D004907 ORTHO05D005707 5.7e-08 62.8 53 49.1
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 7.4e-08 62.4 56 50.0
Manes.13G027600 Manihot esculenta HOM05D004907 ORTHO05D005707 9.7e-08 62.0 53 49.1
Actinidia09494 Actinidia chinensis HOM05D007853 ORTHO05D009873 1.7e-07 61.2 46 54.3
Dinv04666 Davidia involucrata HOM05D007853 ORTHO05D009873 1.7e-07 61.2 50 52.0
SEGI_02257 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 1.7e-07 61.2 52 50.0
TWI36G0219 Tripterygium wilfordii HOM05D004907 ORTHO05D005707 2.2e-07 60.8 87 40.2
Hma1.2p1_1061F.1_g253350 Hydrangea macrophylla HOM05D007853 ORTHO05D009873 2.8e-07 60.5 50 52.0
Mapoly0119s0021 Marchantia polymorpha HOM05D007853 ORTHO05D009873 3.7e-07 60.1 53 45.3
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 3.7e-07 60.1 53 52.8
PSO170G1656 Papaver somniferum HOM05D004907 ORTHO05D005707 3.7e-07 60.1 57 49.1
GSVIVG01028563001 Vitis vinifera HOM05D007853 ORTHO05D009873 4.8e-07 59.7 50 52.0
TAR636G2687 Trochodendron aralioides HOM05D007853 ORTHO05D009873 6.3e-07 59.3 50 50.0
Lj1C83T5 Lonicera japonica HOM05D007853 ORTHO05D009873 1.1e-06 58.5 52 50.0
Actinidia23732 Actinidia chinensis HOM05D007853 ORTHO05D009873 1.4e-06 58.2 46 52.2
Ciclev10020523m.g Citrus clementina HOM05D007853 ORTHO05D009873 1.4e-06 58.2 50 50.0
Haze_24777 Corylus avellana HOM05D007853 ORTHO05D009873 1.4e-06 58.2 50 52.0
MBI10_g16828_MAGBIO Magnolia biondii HOM05D007853 ORTHO05D009873 1.4e-06 58.2 50 48.0
Aa31LG7G7420 Aethionema arabicum HOM05D004907 ORTHO05D005707 1.8e-06 57.8 57 43.9
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 1.8e-06 57.8 50 52.0
DCAR_000536 Daucus carota HOM05D007853 ORTHO05D009873 1.8e-06 57.8 52 50.0
Eucgr.H02548 Eucalyptus grandis HOM05D004907 ORTHO05D005707 1.8e-06 57.8 53 39.6
FAN22G1867 Fragaria x ananassa HOM05D004907 ORTHO05D005707 1.8e-06 57.8 50 46.0
A09p41240 Brassica napus HOM05D004907 ORTHO05D005707 2.4e-06 57.4 61 49.2
BraA09t39619Z Brassica rapa HOM05D004907 ORTHO05D005707 2.4e-06 57.4 61 49.2
ATR0787G102 Amborella trichopoda HOM05D007853 ORTHO05D009873 3.1e-06 57.0 59 44.1
BolC5t30967H Brassica oleracea HOM05D004907 ORTHO05D005707 3.1e-06 57.0 61 49.2
Eucgr.H02549 Eucalyptus grandis HOM05D004907 ORTHO05D005707 3.1e-06 57.0 53 41.5
Gohir.D05G315200 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.1e-06 56.6 56 41.1
Atru.chr11.2072 Acer truncatum HOM05D004907 ORTHO05D005707 5.3e-06 56.2 53 41.5
BcaC05g26256 Brassica carinata HOM05D004907 ORTHO05D005707 5.3e-06 56.2 61 49.2
C05p22690 Brassica napus HOM05D004907 ORTHO05D005707 5.3e-06 56.2 61 49.2
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 5.3e-06 56.2 53 41.5
FvH4_4g32970 Fragaria vesca HOM05D004907 ORTHO05D005707 5.3e-06 56.2 50 44.0
FAN07G1203 Fragaria x ananassa HOM05D004907 ORTHO05D005707 5.3e-06 56.2 50 44.0
FAN12G3344 Fragaria x ananassa HOM05D004907 ORTHO05D005707 5.3e-06 56.2 50 44.0
Nn4g22709 Nelumbo nucifera HOM05D004907 ORTHO05D005707 5.3e-06 56.2 58 44.8
DCAR_007072 Daucus carota HOM05D004907 ORTHO05D005707 6.9e-06 55.8 53 47.2
Aqoxy3G02876 Aquilegia oxysepala HOM05D004907 ORTHO05D005707 9.1e-06 55.5 56 42.9
AT1G23390 Arabidopsis thaliana HOM05D004907 ORTHO05D005707 9.1e-06 55.5 58 48.3
Oeu015462.1 Olea europaea HOM05D007853 ORTHO05D009873 9.1e-06 55.5 50 46.0


User provided reference genes

Program Settings