Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 3.3e-186 654.8 312 100.0
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 2.1e-148 529.3 305 80.3
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 3.3e-146 521.9 305 78.4
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.3e-146 521.5 305 79.3
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 9.6e-146 520.4 306 77.8
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.3e-145 520.0 305 78.0
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 1.6e-145 519.6 305 79.3
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 3.6e-145 518.5 308 77.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.8e-145 518.1 305 78.0
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 4.8e-145 518.1 305 78.4
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.2e-145 517.7 305 78.7
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 6.2e-145 517.7 308 77.3
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 8.1e-145 517.3 305 78.4
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.8e-144 516.2 302 78.8
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.0e-144 515.0 308 76.6
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.2e-143 513.5 306 76.5
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.2e-143 513.5 305 76.7
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.5e-143 513.1 311 76.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 2.6e-143 512.3 305 77.7
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 3.4e-143 511.9 308 77.3
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.4e-143 511.9 303 77.6
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 5.8e-143 511.1 308 76.6
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 7.6e-143 510.8 305 77.0
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 9.9e-143 510.4 305 76.7
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.9e-142 508.8 308 76.0
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 8.4e-142 507.3 305 77.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 8.4e-142 507.3 306 76.1
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 1.1e-141 506.9 305 76.1
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.9e-141 506.1 307 76.5
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.4e-141 505.8 306 75.8
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.4e-141 505.8 305 76.1
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 3.2e-141 505.4 306 76.5
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.2e-140 503.4 305 76.7
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.6e-140 501.5 305 74.1
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 6.0e-140 501.1 305 74.8
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 6.0e-140 501.1 305 76.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 6.0e-140 501.1 305 76.1
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 6.0e-140 501.1 305 75.1
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.0e-139 500.4 305 74.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.8e-139 499.6 305 74.1
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.8e-139 499.6 311 74.6
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 3.9e-139 498.4 305 74.4
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 5.1e-139 498.0 308 74.7
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 8.7e-139 497.3 305 74.4
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 4.3e-138 495.0 305 73.8
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 6.2e-137 491.1 305 73.8
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.1e-136 490.3 308 74.4
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.1e-136 490.3 302 75.5
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-136 490.0 305 76.1
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.4e-136 490.0 305 75.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 3.4e-135 485.3 308 75.0
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 7.6e-135 484.2 305 72.5
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.7e-134 483.0 310 71.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.7e-134 483.0 305 75.7
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.9e-134 482.3 310 71.6
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 3.8e-134 481.9 310 71.6
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 3.8e-134 481.9 310 71.6
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 3.8e-134 481.9 310 71.6
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 4.2e-133 478.4 308 73.1
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.2e-132 476.9 314 71.3
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 2.7e-132 475.7 308 72.4
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 6.0e-132 474.6 311 72.0
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 6.0e-132 474.6 305 72.8
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 4.3e-130 468.4 285 76.5
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 4.3e-130 468.4 267 81.6
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 2.1e-129 466.1 305 72.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.4e-128 463.4 305 72.1
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 1.5e-127 459.9 313 72.2
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 5.0e-126 454.9 266 78.9
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 9.3e-125 450.7 408 57.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.1e-124 449.5 357 61.9
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.5e-122 443.4 306 64.1
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 2.8e-121 439.1 265 77.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 6.9e-120 434.5 301 68.1
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.8e-118 428.7 258 77.9
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.4e-117 426.8 309 67.0
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 7.9e-116 421.0 324 63.3
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.7e-113 412.1 245 78.4
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.6e-108 396.7 305 63.3
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 4.4e-106 388.7 305 62.0
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.1e-96 357.5 341 55.7
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 8.0e-92 341.3 179 87.2
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.8e-89 332.0 266 62.0
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.0e-83 314.3 160 88.1
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.8e-83 313.5 305 54.4
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 6.8e-83 311.6 160 87.5
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 4.4e-82 308.9 250 56.8
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 4.4e-82 308.9 160 86.9
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 7.5e-82 308.1 163 84.0
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 7.5e-82 308.1 177 78.0
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 1.3e-81 307.4 160 86.9
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 1.7e-81 307.0 160 86.2
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 2.8e-81 306.2 160 86.9
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 4.9e-81 305.4 160 86.2
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 3.1e-80 302.8 160 86.2
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 4.1e-80 302.4 157 87.3
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 5.4e-80 302.0 160 84.4
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 7.0e-80 301.6 160 84.4
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 5.9e-79 298.5 163 82.2
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.5e-77 293.9 163 81.6
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.2e-72 276.2 192 69.3
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 3.2e-72 276.2 177 73.4
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.3e-65 254.2 136 84.6
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 5.1e-54 215.7 125 76.8
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 4.9e-49 199.1 103 84.5
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 1.2e-44 184.5 126 69.0
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 3.6e-44 183.0 101 78.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 8.1e-44 181.8 126 68.3
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.4e-43 181.0 126 67.5
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.8e-43 180.6 126 66.7
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 6.9e-43 178.7 126 66.7
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 8.9e-43 178.3 126 66.7
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.2e-42 177.9 126 65.9
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 2.0e-42 177.2 124 67.7
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 5.8e-42 175.6 126 65.9
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 1.1e-40 171.4 126 63.5
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 2.4e-40 170.2 126 62.7
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 3.2e-40 169.9 126 64.3
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 7.1e-40 168.7 126 63.5
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 2.1e-39 167.2 126 63.5
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 1.7e-38 164.1 119 64.7
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 2.0e-34 150.6 146 53.4
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.5e-29 133.7 69 88.4
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 2.6e-26 123.6 241 32.8
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.7e-25 120.9 66 86.4
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 2.2e-25 120.6 91 61.5
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 4.2e-24 116.3 77 67.5
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 9.3e-24 115.2 80 66.2
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 4.5e-18 96.3 66 68.2
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 9.0e-11 72.0 73 50.7
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 2.7e-07 60.5 34 79.4
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-06 57.4 49 57.1


User provided reference genes

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