Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 4.8e-88 327.8 163 100.0
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 1.5e-36 156.8 127 58.3
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 2.5e-36 156.0 132 56.8
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 4.2e-36 155.2 144 58.3
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 7.2e-36 154.5 127 59.8
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 9.4e-36 154.1 145 54.5
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 4.7e-35 151.8 126 56.3
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 6.1e-35 151.4 147 49.0
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 8.8e-34 147.5 131 57.3
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 1.2e-33 147.1 120 56.7
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 1.2e-33 147.1 149 53.0
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 1.2e-33 147.1 140 51.4
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 1.2e-33 147.1 142 50.7
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 1.5e-33 146.7 120 60.0
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.5e-33 146.7 138 52.9
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 1.5e-33 146.7 162 47.5
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 1.5e-33 146.7 140 51.4
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 2.0e-33 146.4 132 56.8
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 2.0e-33 146.4 140 52.1
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 2.0e-33 146.4 127 54.3
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 2.6e-33 146.0 119 58.0
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 2.6e-33 146.0 121 58.7
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 2.6e-33 146.0 114 60.5
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 2.6e-33 146.0 114 60.5
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 2.6e-33 146.0 124 54.8
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 3.4e-33 145.6 139 52.5
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 3.4e-33 145.6 119 57.1
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 7.5e-33 144.4 132 54.5
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 9.8e-33 144.1 106 62.3
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 9.8e-33 144.1 134 53.7
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 1.3e-32 143.7 127 58.3
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.3e-32 143.7 107 60.7
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 1.3e-32 143.7 118 54.2
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.3e-32 143.7 103 63.1
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 1.3e-32 143.7 141 52.5
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 1.7e-32 143.3 126 52.4
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 2.2e-32 142.9 139 53.2
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 2.8e-32 142.5 127 52.8
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 3.7e-32 142.1 106 60.4
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 3.7e-32 142.1 106 60.4
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 6.3e-32 141.4 150 48.7
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 1.1e-31 140.6 109 60.6
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 1.4e-31 140.2 119 56.3
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 1.8e-31 139.8 125 56.0
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 1.8e-31 139.8 148 50.7
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 2.4e-31 139.4 139 47.5
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 2.4e-31 139.4 154 45.5
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 2.4e-31 139.4 109 59.6
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 3.1e-31 139.0 130 53.8
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 3.1e-31 139.0 127 52.0
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 3.1e-31 139.0 107 59.8
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 3.1e-31 139.0 134 51.5
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 3.1e-31 139.0 139 50.4
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 4.1e-31 138.7 118 52.5
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 4.1e-31 138.7 122 54.1
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 5.4e-31 138.3 109 59.6
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 7.0e-31 137.9 150 47.3
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 7.0e-31 137.9 114 57.0
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 9.1e-31 137.5 134 51.5
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 9.1e-31 137.5 144 50.0
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 9.1e-31 137.5 150 47.3
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 9.1e-31 137.5 150 48.0
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 9.1e-31 137.5 133 51.9
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 1.2e-30 137.1 132 53.0
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 1.2e-30 137.1 109 59.6
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 1.2e-30 137.1 109 59.6
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 1.2e-30 137.1 134 50.7
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 1.2e-30 137.1 118 54.2
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 1.2e-30 137.1 102 62.7
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.6e-30 136.7 140 52.1
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 1.6e-30 136.7 109 57.8
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 1.6e-30 136.7 119 52.9
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 1.6e-30 136.7 119 52.9
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 2.0e-30 136.3 134 50.0
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 2.0e-30 136.3 128 54.7
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 2.0e-30 136.3 134 50.7
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 2.7e-30 136.0 136 51.5
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 3.5e-30 135.6 103 61.2
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 4.5e-30 135.2 134 49.3
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 7.7e-30 134.4 109 56.0
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 7.7e-30 134.4 135 48.9
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 1.3e-29 133.7 127 51.2
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 1.3e-29 133.7 120 54.2
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 2.3e-29 132.9 130 50.0
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 3.8e-29 132.1 109 54.1
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 3.8e-29 132.1 121 52.9
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 3.8e-29 132.1 113 54.9
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 5.0e-29 131.7 135 48.9
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 5.0e-29 131.7 135 48.9
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 5.0e-29 131.7 121 52.1
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 8.6e-29 131.0 107 54.2
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 8.6e-29 131.0 118 54.2
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 1.5e-28 130.2 107 55.1
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 1.5e-28 130.2 113 54.0
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 1.9e-28 129.8 135 48.9
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 3.3e-28 129.0 139 47.5
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 4.2e-28 128.6 119 56.3
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 5.5e-28 128.3 137 48.2
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 7.2e-28 127.9 115 48.7
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 1.2e-27 127.1 119 50.4
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 1.8e-26 123.2 108 50.9
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 1.5e-25 120.2 133 46.6
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 1.9e-20 103.2 139 38.8
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 4.3e-20 102.1 139 38.1
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 7.3e-20 101.3 85 56.5
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 1.2e-19 100.5 84 58.3
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 3.6e-19 99.0 79 59.5
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 1.0e-18 97.4 111 44.1
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 1.4e-18 97.1 78 56.4
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 8.9e-18 94.4 83 56.6
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 8.9e-18 94.4 77 55.8
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 1.7e-16 90.1 53 71.7
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 6.4e-16 88.2 56 67.9
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 6.4e-16 88.2 51 72.5
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 1.9e-15 86.7 78 52.6
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 7.0e-15 84.7 110 42.7
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 9.2e-15 84.3 46 73.9
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 7.8e-14 81.3 45 73.3
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 1.3e-13 80.5 102 41.2
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.7e-13 80.1 104 41.3
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 3.9e-13 79.0 80 41.2
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 4.7e-11 72.0 104 39.4
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 1.8e-10 70.1 76 43.4
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 2.0e-09 66.6 100 37.0
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 1.3e-08 63.9 76 42.1
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 2.2e-08 63.2 93 38.7


User provided reference genes

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