Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19507 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 2.7e-89 332.0 174 100.0
SEGI_41139 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 5.1e-88 327.8 174 98.9
SEGI_33126 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 1.3e-86 323.2 173 97.7
SEGI_29788 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 3.8e-51 205.3 173 63.0
SEGI_22185 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 5.2e-48 194.9 181 63.0
SEGI_22584 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 5.2e-48 194.9 181 63.0
SEGI_29719 Sequoiadendron giganteum HOM05D005192 ORTHO05D006023 5.2e-48 194.9 181 63.0
Os04g0601400 Oryza sativa ssp. japonica HOM05D005192 ORTHO05D006023 5.0e-19 98.6 174 33.9
Zm00001eb071820 Zea mays HOM05D005192 ORTHO05D006023 5.0e-19 98.6 174 35.1
PSO782G4714 Papaver somniferum HOM05D005192 ORTHO05D006023 3.0e-16 89.4 174 29.9
Nn3g21169 Nelumbo nucifera HOM05D005192 ORTHO05D006023 1.5e-15 87.0 174 31.6
PSO063G5995 Papaver somniferum HOM05D005192 ORTHO05D006023 2.0e-15 86.7 173 29.5
vmacro13584 Vaccinium macrocarpon HOM05D005192 ORTHO05D006023 4.4e-15 85.5 155 31.0
Eucgr.E01765 Eucalyptus grandis HOM05D005192 ORTHO05D006023 7.5e-15 84.7 174 29.9
TAR629G1606 Trochodendron aralioides HOM05D005192 ORTHO05D006023 1.3e-14 84.0 175 29.7
Lj3g0015892 Lotus japonicus HOM05D005192 ORTHO05D006023 1.7e-14 83.6 174 31.6
Cpa.g.sc73.77 Carica papaya HOM05D005192 ORTHO05D006023 2.9e-14 82.8 157 31.8
Aqoxy3G01990 Aquilegia oxysepala HOM05D005192 ORTHO05D006023 6.4e-14 81.6 173 28.3
Mapoly0125s0044 Marchantia polymorpha HOM05D005192 ORTHO05D006023 6.4e-14 81.6 117 37.6
MSTRG.17088 Avicennia marina HOM05D005192 ORTHO05D006023 8.3e-14 81.3 157 28.0
Hma1.2p1_0353F.1_g133370 Hydrangea macrophylla HOM05D005192 ORTHO05D006023 3.2e-13 79.3 174 29.3
Sc26g0002010 Simmondsia chinensis HOM05D005192 ORTHO05D006023 4.1e-13 79.0 172 27.3
SGA_v2.0_scaffold98G29401 Striga asiatica HOM05D005192 ORTHO05D006023 4.1e-13 79.0 157 28.7
vmacro13581 Vaccinium macrocarpon HOM05D005192 ORTHO05D006023 4.1e-13 79.0 157 29.9
PGR042G1459 Punica granatum HOM05D005192 ORTHO05D006023 5.4e-13 78.6 157 27.4
THA.LOC104805728 Tarenaya hassleriana HOM05D005192 ORTHO05D006023 5.4e-13 78.6 174 29.9
Migut.B01443 Erythranthe guttata HOM05D005192 ORTHO05D006023 7.0e-13 78.2 157 28.7
CiPaw.02G036100 Carya illinoinensis HOM05D005192 ORTHO05D006023 9.2e-13 77.8 175 29.1
Actinidia05822 Actinidia chinensis HOM05D005192 ORTHO05D006023 1.6e-12 77.0 174 27.0
HPP92_014406 Vanilla planifolia HOM05D005192 ORTHO05D006023 1.6e-12 77.0 174 28.2
Ciclev10032932m.g Citrus clementina HOM05D005192 ORTHO05D006023 2.0e-12 76.6 157 28.7
Rhsim07G0045800 Rhododendron simsii HOM05D005192 ORTHO05D006023 2.0e-12 76.6 157 28.7
GSVIVG01011324001 Vitis vinifera HOM05D005192 ORTHO05D006023 2.0e-12 76.6 157 28.7
SalBow5G0434 Salvia bowleyana HOM05D003398 ORTHO05D003867 2.7e-12 76.3 167 26.3
Peaxi162Scf00245g00322 Petunia axillaris HOM05D005192 ORTHO05D006023 3.5e-12 75.9 157 26.1
Aa31LG2G2090 Aethionema arabicum HOM05D005192 ORTHO05D006023 4.6e-12 75.5 175 28.6
Gohir.A13G082000 Gossypium hirsutum HOM05D005192 ORTHO05D006023 4.6e-12 75.5 157 27.4
Gohir.D13G100100 Gossypium hirsutum HOM05D005192 ORTHO05D006023 6.0e-12 75.1 157 27.4
Gorai.013G112500 Gossypium raimondii HOM05D005192 ORTHO05D006023 6.0e-12 75.1 157 27.4
Thecc.05G232400 Theobroma cacao HOM05D005192 ORTHO05D006023 7.8e-12 74.7 157 26.8
Sp5g18870 Schrenkiella parvula HOM05D005192 ORTHO05D006023 1.3e-11 73.9 172 27.9
Solyc10g061870.1 Solanum lycopersicum HOM05D005192 ORTHO05D006023 1.3e-11 73.9 157 28.7
TWI32G1299 Tripterygium wilfordii HOM05D005192 ORTHO05D006023 1.3e-11 73.9 157 27.4
TAR629G2600 Trochodendron aralioides HOM05D005192 ORTHO05D006023 1.7e-11 73.6 175 28.0
Atru.chr2.1677 Acer truncatum HOM05D005192 ORTHO05D006023 2.3e-11 73.2 157 27.4
CANSAT01G0826 Cannabis sativa HOM05D005192 ORTHO05D006023 2.3e-11 73.2 174 23.6
Cc02_g26360 Coffea canephora HOM05D005192 ORTHO05D006023 2.3e-11 73.2 123 31.7
Dinv43977 Davidia involucrata HOM05D005192 ORTHO05D006023 2.3e-11 73.2 123 31.7
Glyma.03G098300 Glycine max HOM05D005192 ORTHO05D006023 2.3e-11 73.2 174 27.6
Oeu060687.1 Olea europaea HOM05D005192 ORTHO05D006023 2.3e-11 73.2 160 26.9
SMO137G0328 Selaginella moellendorffii HOM05D005192 ORTHO05D006023 2.3e-11 73.2 119 29.4
Hund26918 Selenicereus undatus HOM05D005192 ORTHO05D006023 2.3e-11 73.2 155 27.1
DCAR_029189 Daucus carota HOM05D005192 ORTHO05D006023 3.0e-11 72.8 123 31.7
Lj9C612T3 Lonicera japonica HOM05D005192 ORTHO05D006023 3.0e-11 72.8 157 26.1
ATR0829G090 Amborella trichopoda HOM05D005192 ORTHO05D006023 3.9e-11 72.4 174 28.2
AagrBONN_evm.TU.Sc2ySwM_117.2458 Anthoceros agrestis HOM05D005192 ORTHO05D006023 5.0e-11 72.0 152 27.0
arahy.Tifrunner.gnm1.ann1.SX2T07 Arachis hypogaea HOM05D005192 ORTHO05D006023 5.0e-11 72.0 174 27.0
BcaB05g24444 Brassica carinata HOM05D005192 ORTHO05D006023 5.0e-11 72.0 172 27.9
Carub.0012s0005 Capsella rubella HOM05D005192 ORTHO05D006023 5.0e-11 72.0 172 26.7
Haze_15802 Corylus avellana HOM05D005192 ORTHO05D006023 5.0e-11 72.0 155 27.7
Duzib128G1721 Durio zibethinus HOM05D005192 ORTHO05D006023 5.0e-11 72.0 142 30.3
Duzib177G0632 Durio zibethinus HOM05D005192 ORTHO05D006023 5.0e-11 72.0 142 31.7
Gohir.A11G222400 Gossypium hirsutum HOM05D005192 ORTHO05D006023 5.0e-11 72.0 144 30.6
Nn3g21165 Nelumbo nucifera HOM05D005192 ORTHO05D006023 5.0e-11 72.0 181 27.1
Dinv43532 Davidia involucrata HOM05D005192 ORTHO05D006023 6.6e-11 71.6 147 32.7
Gorai.007G248800 Gossypium raimondii HOM05D005192 ORTHO05D006023 6.6e-11 71.6 142 31.0
AT1G64850 Arabidopsis thaliana HOM05D005192 ORTHO05D006023 8.6e-11 71.2 172 25.6
COL.COLO4_08549 Corchorus olitorius HOM05D005192 ORTHO05D006023 8.6e-11 71.2 157 24.8
DCAR_015753 Daucus carota HOM05D005192 ORTHO05D006023 8.6e-11 71.2 141 30.5
Manes.09G132000 Manihot esculenta HOM05D005192 ORTHO05D006023 8.6e-11 71.2 174 26.4
Nitab4.5_0005106g0020 Nicotiana tabacum HOM05D005192 ORTHO05D006023 8.6e-11 71.2 154 25.3
arahy.Tifrunner.gnm1.ann1.8Z97YG Arachis hypogaea HOM05D005192 ORTHO05D006023 1.5e-10 70.5 174 26.4
Lalb_Chr07g0194821 Lupinus albus HOM05D005192 ORTHO05D006023 1.5e-10 70.5 170 25.9
Nitab4.5_0000050g0110 Nicotiana tabacum HOM05D005192 ORTHO05D006023 1.5e-10 70.5 156 25.0
Potri.013G072600 Populus trichocarpa HOM05D005192 ORTHO05D006023 1.5e-10 70.5 134 29.9
CARHR056260 Cardamine hirsuta HOM05D005192 ORTHO05D006023 2.5e-10 69.7 172 27.3
AUR62014514 Chenopodium quinoa HOM05D000462 ORTHO05D006023 2.5e-10 69.7 172 26.2
Ca_25887_v3 Cicer arietinum L. HOM05D000403 ORTHO05D000350 2.5e-10 69.7 157 31.2
Phvul.010G038600 Phaseolus vulgaris HOM05D005192 ORTHO05D006023 2.5e-10 69.7 174 27.0
Sed0012289 Sechium edule HOM05D005192 ORTHO05D006023 3.3e-10 69.3 174 28.7
AL2G19260 Arabidopsis lyrata HOM05D005192 ORTHO05D006023 4.3e-10 68.9 172 26.7
Gohir.D11G235900 Gossypium hirsutum HOM05D005192 ORTHO05D006023 4.3e-10 68.9 142 30.3
VMungo0331G1938 Vigna mungo HOM05D005192 ORTHO05D006023 4.3e-10 68.9 174 26.4
Lsat_1_v5_gn_4_42301 Lactuca sativa HOM05D005192 ORTHO05D006023 5.6e-10 68.6 173 24.3
Medtr8g009870 Medicago truncatula HOM05D005192 ORTHO05D006023 5.6e-10 68.6 174 28.2
Lalb_Chr12g0210171 Lupinus albus HOM05D005192 ORTHO05D006023 7.3e-10 68.2 122 28.7
unitig_61.g26432 Utricularia gibba HOM05D005192 ORTHO05D006023 7.3e-10 68.2 172 26.7
TPR.G17364 Trifolium pratense HOM05D005192 ORTHO05D006023 9.5e-10 67.8 174 27.6
Oeu041522.2 Olea europaea HOM05D005192 ORTHO05D006023 2.1e-09 66.6 120 29.2
CDE04G3605 Ceratophyllum demersum HOM05D005192 ORTHO05D006023 2.8e-09 66.2 174 27.6
ECA234G1488 Erigeron canadensis HOM05D005192 ORTHO05D006023 2.8e-09 66.2 122 27.9
Psat4g215840 Pisum sativum HOM05D005192 ORTHO05D006023 4.7e-09 65.5 157 24.8
CAN.G700.32 Capsicum annuum HOM05D005192 ORTHO05D006023 8.0e-09 64.7 123 26.0
Glyma.07G123500 Glycine max HOM05D005192 ORTHO05D006023 8.0e-09 64.7 125 30.4
Peaxi162Scf00250g00049 Petunia axillaris HOM05D005192 ORTHO05D006023 1.1e-08 64.3 123 27.6
HanXRQChr11g0330951 Helianthus annuus HOM05D005192 ORTHO05D006023 1.8e-08 63.5 173 23.1
PGSC0003DMG400001805 Solanum tuberosum HOM05D005192 ORTHO05D006023 1.8e-08 63.5 157 23.6
Solyc01g081190.4 Solanum lycopersicum HOM05D005192 ORTHO05D006023 2.3e-08 63.2 157 22.9
Sopen01g032770 Solanum pennellii HOM05D005192 ORTHO05D006023 6.8e-08 61.6 134 25.4
ClCG05G002570 Citrullus lanatus HOM05D005192 ORTHO05D006023 8.9e-08 61.2 142 28.9
Ah.05g177160 Amaranthus hybridus HOM05D005192 ORTHO05D006023 2.0e-07 60.1 172 26.2
CsaV3_3G010010 Cucumis sativus L. HOM05D005192 ORTHO05D006023 2.0e-07 60.1 132 28.8
Pp3c3_35520 Physcomitrium patens HOM05D005192 ORTHO05D006023 2.6e-07 59.7 175 26.3
Sed0020247 Sechium edule HOM05D005192 ORTHO05D006023 3.4e-07 59.3 174 27.0
arahy.Tifrunner.gnm1.ann1.9NJ9Q0 Arachis hypogaea HOM05D005192 ORTHO05D006023 1.7e-06 57.0 151 26.5
AUR62038020 Chenopodium quinoa HOM05D005192 ORTHO05D006023 2.9e-06 56.2 204 23.0


User provided reference genes

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