Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19391 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.0e-242 842.0 424 100.0
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 1.7e-116 423.7 417 57.8
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.8e-116 422.9 420 54.5
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 4.5e-114 415.6 418 53.8
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.2e-113 413.3 243 84.8
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 9.4e-112 407.9 416 54.3
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 2.1e-111 406.8 418 55.3
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 6.1e-111 405.2 416 52.2
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 6.8e-110 401.7 344 61.0
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 5.4e-107 392.1 418 50.7
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 9.1e-107 391.3 416 53.4
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 5.9e-106 388.7 403 52.9
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 2.3e-105 386.7 418 50.7
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 1.9e-104 383.6 418 50.5
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 4.2e-104 382.5 418 50.7
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 7.2e-104 381.7 421 50.4
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 2.8e-103 379.8 444 49.1
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.0e-102 377.9 370 53.5
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 5.2e-102 375.6 416 51.0
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 5.2e-102 375.6 416 51.0
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 5.2e-102 375.6 416 49.8
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 8.9e-102 374.8 419 50.8
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 2.0e-101 373.6 373 53.4
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 2.6e-101 373.2 418 50.2
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 5.7e-101 372.1 416 49.0
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 5.7e-101 372.1 421 50.8
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 9.8e-101 371.3 420 51.0
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 9.8e-101 371.3 423 50.8
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 3.7e-100 369.4 418 51.0
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 6.3e-100 368.6 458 48.5
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 6.3e-100 368.6 416 48.6
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 1.8e-99 367.1 388 52.8
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 3.1e-99 366.3 384 54.2
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 4.1e-99 365.9 421 50.1
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 4.1e-99 365.9 384 54.2
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.1e-99 365.9 417 50.1
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 7.0e-99 365.2 416 48.1
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 9.2e-99 364.8 420 50.5
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 1.2e-98 364.4 371 52.6
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 1.2e-98 364.4 387 51.2
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 1.2e-98 364.4 419 48.9
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 1.6e-98 364.0 422 49.8
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 5.9e-98 362.1 418 49.8
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 2.3e-97 360.1 416 50.0
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 2.3e-97 360.1 418 49.5
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 2.9e-97 359.8 421 50.1
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 3.8e-97 359.4 418 49.5
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 5.0e-97 359.0 407 48.9
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 8.6e-97 358.2 367 52.9
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 1.9e-96 357.1 422 49.3
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 3.3e-96 356.3 421 49.9
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 5.6e-96 355.5 421 49.9
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 5.6e-96 355.5 425 46.8
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 5.6e-96 355.5 404 50.0
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 7.3e-96 355.1 415 49.9
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 1.6e-95 354.0 417 48.2
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 2.8e-95 353.2 419 49.6
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 4.7e-95 352.4 400 51.0
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 4.7e-95 352.4 365 52.9
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 8.0e-95 351.7 420 50.0
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 8.0e-95 351.7 420 49.8
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 1.4e-94 350.9 384 50.0
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 6.8e-94 348.6 408 49.0
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 8.9e-94 348.2 376 51.1
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 8.9e-94 348.2 376 51.1
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 1.2e-93 347.8 418 48.1
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 2.6e-93 346.7 375 50.9
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 1.3e-92 344.4 377 50.7
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 1.7e-92 344.0 420 48.1
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 2.2e-92 343.6 418 48.8
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 2.2e-92 343.6 382 48.4
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 2.9e-92 343.2 373 50.9
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 6.4e-92 342.0 375 50.4
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 3.2e-91 339.7 375 50.4
Lj2A763G34 Lonicera japonica HOM05D000764 ORTHO05D004953 3.2e-91 339.7 445 45.6
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 3.2e-91 339.7 419 47.7
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 7.0e-91 338.6 398 48.0
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 1.2e-90 337.8 390 49.0
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 6.0e-90 335.5 443 45.6
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 1.3e-89 334.3 433 46.7
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 2.3e-89 333.6 367 52.6
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 3.0e-89 333.2 354 52.5
Os05g0447580 Oryza sativa ssp. japonica HOM05D000764 ORTHO05D004953 6.6e-89 332.0 367 51.5
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 6.6e-89 332.0 162 100.0
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 1.5e-88 330.9 483 41.0
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 1.9e-88 330.5 351 53.0
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 3.3e-88 329.7 408 48.5
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 1.6e-87 327.4 381 48.8
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 2.1e-87 327.0 405 47.2
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.3e-86 323.6 348 52.3
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 2.6e-85 320.1 380 48.2
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 9.8e-85 318.2 390 48.2
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.7e-84 317.4 367 47.1
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 4.1e-83 312.8 491 41.1
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 5.1e-81 305.8 385 46.0
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.5e-80 304.3 357 48.5
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 8.1e-79 298.5 536 37.7
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 2.6e-77 293.5 373 46.1
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 4.1e-75 286.2 378 43.9
Actinidia15647 Actinidia chinensis HOM05D000764 ORTHO05D004953 1.1e-72 278.1 217 65.4
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.1e-70 271.6 331 46.2
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 4.0e-70 269.6 413 40.9
Hma1.2p1_0449F.1_g155100 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 1.3e-65 254.6 206 62.6
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.2e-63 248.1 373 40.5
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 1.4e-62 244.6 414 38.2
vmacro06920 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 2.4e-54 217.2 165 66.1
COL.COLO4_07282 Corchorus olitorius HOM05D000764 ORTHO05D004953 4.0e-54 216.5 171 64.3
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 1.5e-53 214.5 254 46.9
VMungo1080G1824 Vigna mungo HOM05D000764 ORTHO05D004953 7.6e-53 212.2 158 65.8
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 1.3e-52 211.5 396 36.9
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 1.4e-51 208.0 300 41.0
CDE10G1322 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.9e-44 183.7 129 69.8
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 1.1e-35 155.2 215 41.4
CDE10G0100 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.7e-34 150.6 291 36.8
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 8.7e-33 145.6 249 39.0
VMungo1383G3575 Vigna mungo HOM05D000764 ORTHO05D004953 1.8e-25 121.3 339 30.4
Cpa.g.sc119.45 Carica papaya HOM05D000764 ORTHO05D004953 2.1e-18 97.8 163 42.3
Rhsim12G0118500 Rhododendron simsii HOM05D000764 ORTHO05D004953 7.0e-14 82.8 217 30.0
BcaC03g15090 Brassica carinata HOM05D000951 ORTHO05D032059 7.2e-11 72.8 75 45.3
BolC2t08722H Brassica oleracea HOM05D000951 ORTHO05D032059 7.2e-11 72.8 75 45.3
CBR_g38302 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-10 72.0 75 46.7
SHI31294 Sapria himalayana HOM05D000764 ORTHO05D004953 1.1e-08 65.5 107 41.1
PSO339G0018 Papaver somniferum HOM05D000164 ORTHO05D000096 3.1e-06 57.4 136 30.9
MELO3C030779.2 Cucumis melo HOM05D000764 ORTHO05D004953 7.0e-06 56.2 98 32.7


User provided reference genes

Program Settings