Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19330 Sequoiadendron giganteum HOM05D001781 ORTHO05D001711 1.2e-117 426.4 206 100.0
HPP92_015975 Vanilla planifolia HOM05D001781 ORTHO05D001711 6.6e-10 68.6 220 28.2
Duzib084G0329 Durio zibethinus HOM05D001781 ORTHO05D001711 1.9e-09 67.0 134 29.9
Ciclev10015789m.g Citrus clementina HOM05D001781 ORTHO05D001711 2.5e-09 66.6 134 31.3
CSS0048099 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 5.6e-09 65.5 138 34.1
SGA_v2.0_scaffold43G16415 Striga asiatica HOM05D001781 ORTHO05D001711 1.6e-08 63.9 132 29.5
CDE06G2319 Ceratophyllum demersum HOM05D001781 ORTHO05D001711 2.1e-08 63.5 164 31.1
Migut.B01754 Erythranthe guttata HOM05D001781 ORTHO05D001711 2.1e-08 63.5 132 30.3
Potri.003G093600 Populus trichocarpa HOM05D001781 ORTHO05D001711 2.1e-08 63.5 135 31.1
Duzib205G1979 Durio zibethinus HOM05D001781 ORTHO05D001711 2.8e-08 63.2 134 29.1
Lalb_Chr16g0381271 Lupinus albus HOM05D001781 ORTHO05D001711 2.8e-08 63.2 139 29.5
Sabra01G0109600 Salix brachista HOM05D001781 ORTHO05D001711 2.8e-08 63.2 134 29.9
CsaV3_3G049030 Cucumis sativus L. HOM05D001781 ORTHO05D001711 4.7e-08 62.4 132 27.3
PSO782G1848 Papaver somniferum HOM05D001781 ORTHO05D001711 4.7e-08 62.4 262 26.3
SEGI_31390 Sequoiadendron giganteum HOM05D001781 ORTHO05D001711 4.7e-08 62.4 266 29.3
Duzib068G0201 Durio zibethinus HOM05D001781 ORTHO05D001711 6.2e-08 62.0 134 29.1
Potri.001G140800 Populus trichocarpa HOM05D001781 ORTHO05D001711 6.2e-08 62.0 134 28.4
PGR042G1951 Punica granatum HOM05D001781 ORTHO05D001711 6.2e-08 62.0 135 29.6
TAR375G0425 Trochodendron aralioides HOM05D001781 ORTHO05D001711 6.2e-08 62.0 150 30.0
Manes.17G014200 Manihot esculenta HOM05D001781 ORTHO05D001711 8.1e-08 61.6 132 27.3
Prupe.5G033000 Prunus persica HOM05D001781 ORTHO05D001711 8.1e-08 61.6 133 28.6
vmacro14180 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 8.1e-08 61.6 133 29.3
CiPaw.12G065100 Carya illinoinensis HOM05D001781 ORTHO05D001711 1.1e-07 61.2 149 28.9
FAN13G2503 Fragaria x ananassa HOM05D001781 ORTHO05D001711 1.1e-07 61.2 132 28.0
Lalb_Chr05g0215931 Lupinus albus HOM05D001781 ORTHO05D001711 1.1e-07 61.2 134 29.9
Sabra03G0062800 Salix brachista HOM05D001781 ORTHO05D001711 1.1e-07 61.2 133 27.8
ATR0057G116 Amborella trichopoda HOM05D001781 ORTHO05D001711 1.4e-07 60.8 135 32.6
FAN04G2783 Fragaria x ananassa HOM05D001781 ORTHO05D001711 1.4e-07 60.8 132 28.0
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 1.8e-07 60.5 206 25.2
ClCG09G011800 Citrullus lanatus HOM05D001781 ORTHO05D001711 2.3e-07 60.1 132 25.8
Glyma.01G095100 Glycine max HOM05D001781 ORTHO05D001711 2.3e-07 60.1 132 31.8
Actinidia14796 Actinidia chinensis HOM05D001781 ORTHO05D001711 3.1e-07 59.7 135 31.1
C05p31800 Brassica napus HOM05D001781 ORTHO05D001711 3.1e-07 59.7 132 28.0
BolC5t31909H Brassica oleracea HOM05D001781 ORTHO05D001711 3.1e-07 59.7 132 28.0
FAN08G0159 Fragaria x ananassa HOM05D001781 ORTHO05D001711 3.1e-07 59.7 132 28.0
MELO3C003423.2 Cucumis melo HOM05D001781 ORTHO05D001711 4.0e-07 59.3 132 25.8
Lj4g0027970 Lotus japonicus HOM05D001781 ORTHO05D001711 5.2e-07 58.9 135 29.6
Nitab4.5_0002998g0030 Nicotiana tabacum HOM05D001781 ORTHO05D001711 5.2e-07 58.9 137 28.5
RcHm_v2.0_Chr7g0210151 Rosa chinensis HOM05D001781 ORTHO05D001711 5.2e-07 58.9 132 28.0
Hund09807 Selenicereus undatus HOM05D001781 ORTHO05D001711 5.2e-07 58.9 164 26.8
AUR62002086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 6.8e-07 58.5 132 28.8
Migut.N01445 Erythranthe guttata HOM05D001781 ORTHO05D001711 6.8e-07 58.5 132 28.0
Lalb_Chr09g0325591 Lupinus albus HOM05D001781 ORTHO05D001711 6.8e-07 58.5 134 28.4
Rhsim07G0128600 Rhododendron simsii HOM05D001781 ORTHO05D001711 6.8e-07 58.5 148 29.1
THA.LOC104812754 Tarenaya hassleriana HOM05D001781 ORTHO05D001711 6.8e-07 58.5 154 28.6
AUR62028204 Chenopodium quinoa HOM05D001781 ORTHO05D001711 8.9e-07 58.2 136 30.1
Eucgr.E00271 Eucalyptus grandis HOM05D001781 ORTHO05D001711 8.9e-07 58.2 133 29.3
FAN18G3931 Fragaria x ananassa HOM05D001781 ORTHO05D001711 8.9e-07 58.2 132 28.0
FAN18G4246 Fragaria x ananassa HOM05D001781 ORTHO05D001711 8.9e-07 58.2 132 28.0
Os08g0159800 Oryza sativa ssp. japonica HOM05D001781 ORTHO05D001711 8.9e-07 58.2 145 29.0
SalBow5G0702 Salvia bowleyana HOM05D001781 ORTHO05D001711 8.9e-07 58.2 132 28.8
PGSC0003DMG400026471 Solanum tuberosum HOM05D001781 ORTHO05D001711 8.9e-07 58.2 134 28.4
TPR.G3329 Trifolium pratense HOM05D001781 ORTHO05D001711 8.9e-07 58.2 132 27.3
Gohir.A12G207600 Gossypium hirsutum HOM05D001781 ORTHO05D001711 1.2e-06 57.8 147 27.9
MBI06_g09277_MAGBIO Magnolia biondii HOM05D001781 ORTHO05D001711 1.2e-06 57.8 243 24.3
Medtr8g066730 Medicago truncatula HOM05D001781 ORTHO05D001711 1.2e-06 57.8 132 26.5
Nitab4.5_0000645g0100 Nicotiana tabacum HOM05D001781 ORTHO05D001711 1.2e-06 57.8 134 29.1
Solyc06g072720.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 1.2e-06 57.8 151 29.1
Sopen06g029090 Solanum pennellii HOM05D001781 ORTHO05D001711 1.2e-06 57.8 151 29.1
PGSC0003DMG400026937 Solanum tuberosum HOM05D001781 ORTHO05D001711 1.2e-06 57.8 151 29.1
VMungo0251G2200 Vigna mungo HOM05D001781 ORTHO05D001711 1.2e-06 57.8 134 27.6
Atru.chr6.1653 Acer truncatum HOM05D001781 ORTHO05D001711 1.5e-06 57.4 153 28.8
Aqoxy3G02311 Aquilegia oxysepala HOM05D001781 ORTHO05D001711 1.5e-06 57.4 151 27.2
CARHR129570 Cardamine hirsuta HOM05D001781 ORTHO05D001711 1.5e-06 57.4 205 26.3
MD06G1036400 Malus domestica HOM05D001781 ORTHO05D001711 1.5e-06 57.4 134 29.9
PSO063G3452 Papaver somniferum HOM05D001781 ORTHO05D001711 1.5e-06 57.4 262 25.2
CiPaw.11G095400 Carya illinoinensis HOM05D001781 ORTHO05D001711 2.0e-06 57.0 151 26.5
Thecc.03G225100 Theobroma cacao HOM05D001781 ORTHO05D001711 2.6e-06 56.6 135 28.1
Cfa012462 Carpinus fangiana HOM05D001781 ORTHO05D001711 3.4e-06 56.2 147 29.3
Ca_02433_v3 Cicer arietinum L. HOM05D001781 ORTHO05D001711 3.4e-06 56.2 136 27.9
Peaxi162Scf00516g00651 Petunia axillaris HOM05D001781 ORTHO05D001711 3.4e-06 56.2 134 27.6
BcaC05g27272 Brassica carinata HOM05D001781 ORTHO05D001711 4.4e-06 55.8 132 27.3
Psat4g121560 Pisum sativum HOM05D001781 ORTHO05D001711 4.4e-06 55.8 136 27.2
Carub.0004s1711 Capsella rubella HOM05D001781 ORTHO05D001711 5.8e-06 55.5 198 26.8
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 5.8e-06 55.5 164 26.2
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 5.8e-06 55.5 269 24.9
Actinidia15795 Actinidia chinensis HOM05D001781 ORTHO05D001711 7.5e-06 55.1 140 27.1
ATR1156G002 Amborella trichopoda HOM05D001781 ORTHO05D001711 7.5e-06 55.1 163 25.8
BcaC02g11648 Brassica carinata HOM05D001781 ORTHO05D001711 9.9e-06 54.7 221 27.1
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 9.9e-06 54.7 205 22.9


User provided reference genes

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