Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.0e-69 266.5 125 100.0
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.6e-35 152.9 129 56.6
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 2.1e-35 152.5 128 59.4
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 2.8e-35 152.1 127 59.1
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 4.0e-34 148.3 122 58.2
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 8.9e-34 147.1 131 57.3
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 1.5e-33 146.4 131 55.0
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 2.0e-33 146.0 127 57.5
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 2.0e-33 146.0 127 57.5
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 2.0e-33 146.0 131 56.5
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 2.6e-33 145.6 129 56.6
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 3.4e-33 145.2 127 56.7
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 3.4e-33 145.2 130 56.2
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 4.4e-33 144.8 129 54.3
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 7.5e-33 144.1 129 55.0
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 7.5e-33 144.1 123 57.7
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 9.8e-33 143.7 128 55.5
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 9.8e-33 143.7 122 57.4
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 9.8e-33 143.7 130 54.6
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 9.8e-33 143.7 128 54.7
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.3e-32 143.3 122 57.4
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 1.3e-32 143.3 129 55.0
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 1.7e-32 142.9 129 55.0
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.7e-32 142.9 130 53.1
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 2.2e-32 142.5 127 56.7
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.8e-32 142.1 127 54.3
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 2.8e-32 142.1 126 55.6
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 3.7e-32 141.7 121 57.9
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 6.3e-32 141.0 130 51.5
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 8.3e-32 140.6 128 53.9
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 8.3e-32 140.6 123 56.1
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 8.3e-32 140.6 127 53.5
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.1e-31 140.2 136 51.5
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 1.4e-31 139.8 127 54.3
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.4e-31 139.8 133 51.9
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.4e-31 139.8 135 53.3
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 1.8e-31 139.4 127 53.5
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 2.4e-31 139.0 131 55.0
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 2.4e-31 139.0 128 52.3
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 4.1e-31 138.3 131 51.1
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 4.1e-31 138.3 126 54.8
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 4.1e-31 138.3 127 52.8
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 5.4e-31 137.9 127 52.8
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 7.0e-31 137.5 127 53.5
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 9.2e-31 137.1 127 52.0
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 9.2e-31 137.1 134 51.5
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 1.2e-30 136.7 126 52.4
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.6e-30 136.3 128 52.3
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.0e-30 136.0 128 52.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 2.0e-30 136.0 125 51.2
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 2.0e-30 136.0 126 52.4
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.7e-30 135.6 137 51.1
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 3.5e-30 135.2 127 54.3
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 4.5e-30 134.8 128 50.8
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 7.8e-30 134.0 128 50.8
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 7.8e-30 134.0 135 49.6
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 1.0e-29 133.7 128 53.9
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 1.0e-29 133.7 128 53.9
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.0e-29 133.7 128 53.1
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.0e-29 133.7 128 53.1
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.3e-29 133.3 135 52.6
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.7e-29 132.9 125 49.6
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 1.7e-29 132.9 141 52.5
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 2.3e-29 132.5 128 49.2
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 2.3e-29 132.5 128 49.2
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 2.9e-29 132.1 127 55.9
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 3.8e-29 131.7 125 52.0
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 3.8e-29 131.7 126 52.4
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 3.8e-29 131.7 126 52.4
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 3.8e-29 131.7 126 49.2
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 5.0e-29 131.3 128 51.6
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 5.0e-29 131.3 119 54.6
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 6.6e-29 131.0 129 51.2
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 8.6e-29 130.6 128 49.2
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 8.6e-29 130.6 128 48.4
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 8.6e-29 130.6 132 50.8
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 1.1e-28 130.2 128 48.4
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 1.1e-28 130.2 128 48.4
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 1.1e-28 130.2 128 48.4
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 1.1e-28 130.2 127 50.4
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 1.1e-28 130.2 126 54.0
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 1.9e-28 129.4 128 48.4
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 1.9e-28 129.4 124 50.8
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 2.5e-28 129.0 127 50.4
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 3.3e-28 128.6 126 53.2
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 5.6e-28 127.9 123 52.8
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 9.5e-28 127.1 126 50.0
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 4.0e-26 121.7 127 48.0
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.0e-25 119.4 107 51.4
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 7.5e-25 117.5 120 51.7
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.2e-24 115.9 107 51.4
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.8e-18 96.3 91 52.7
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 2.1e-14 82.8 126 38.1
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 1.8e-10 69.7 50 64.0
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 6.8e-10 67.8 51 56.9
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 3.4e-09 65.5 50 58.0
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 3.4e-09 65.5 61 52.5
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 3.7e-08 62.0 52 55.8


User provided reference genes

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