Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19199 Sequoiadendron giganteum HOM05D000163 ORTHO05D002741 6.6e-79 297.4 156 100.0
SEGI_06637 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 3.9e-39 165.2 187 53.5
SEGI_20409 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 7.7e-35 151.0 163 55.8
SEGI_24591 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 4.3e-30 135.2 164 53.7
SEGI_22374 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 6.3e-29 131.3 84 81.0
SEGI_14114 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 2.2e-26 122.9 153 49.7
SEGI_31729 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 3.8e-26 122.1 150 46.7
SEGI_25440 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 6.7e-23 111.3 157 43.3
SEGI_34228 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 2.6e-22 109.4 157 43.9
SEGI_17291 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 1.9e-17 93.2 156 46.2
SEGI_29965 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 3.0e-15 85.9 154 40.9
SEGI_01578 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 9.7e-14 80.9 161 42.2
SEGI_13818 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 3.1e-12 75.9 136 40.4
SEGI_07466 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 7.0e-12 74.7 127 40.9
SEGI_12047 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 7.0e-12 74.7 127 40.9
SEGI_23105 Sequoiadendron giganteum HOM05D000163 ORTHO05D000962 2.0e-11 73.2 138 38.4
Haze_15508 Corylus avellana HOM05D000163 ORTHO05D000962 7.2e-09 64.7 133 31.6
ATR0680G035 Amborella trichopoda HOM05D000163 ORTHO05D000962 1.6e-08 63.5 142 32.4
TPR.G5969 Trifolium pratense HOM05D002645 ORTHO05D002741 3.6e-08 62.4 135 32.6
Lj7C511T21 Lonicera japonica HOM05D000163 ORTHO05D000962 8.0e-08 61.2 141 31.9
TAR375G1116 Trochodendron aralioides HOM05D000163 ORTHO05D000962 8.0e-08 61.2 147 35.4
THA.LOC104802031 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 1.0e-07 60.8 139 31.7
Nn6g33412 Nelumbo nucifera HOM05D000163 ORTHO05D000962 1.4e-07 60.5 133 33.8
Psat0s473g0040 Pisum sativum HOM05D002645 ORTHO05D002741 1.4e-07 60.5 137 29.9
MD01G1061400 Malus domestica HOM05D000163 ORTHO05D000962 1.8e-07 60.1 134 31.3
BcaC02g12168 Brassica carinata HOM05D000163 ORTHO05D000962 2.3e-07 59.7 126 33.3
C04p06820 Brassica napus HOM05D000163 ORTHO05D000962 2.3e-07 59.7 126 33.3
BolC4t22304H Brassica oleracea HOM05D000163 ORTHO05D000962 2.3e-07 59.7 126 33.3
A05p05880 Brassica napus HOM05D000163 ORTHO05D000962 3.0e-07 59.3 126 33.3
BraA05t19552Z Brassica rapa HOM05D000163 ORTHO05D000962 3.0e-07 59.3 126 33.3
MBI18_g29424_MAGBIO Magnolia biondii HOM05D000163 ORTHO05D000962 3.0e-07 59.3 154 29.2
BcaC02g12167 Brassica carinata HOM05D000163 ORTHO05D000962 4.0e-07 58.9 128 31.2
CiPaw.02G031300 Carya illinoinensis HOM05D000163 ORTHO05D000962 5.2e-07 58.5 116 32.8
Ciclev10016013m.g Citrus clementina HOM05D002645 ORTHO05D002741 5.2e-07 58.5 133 30.1
Duzib268G0051 Durio zibethinus HOM05D000163 ORTHO05D000962 5.2e-07 58.5 124 31.5
Os09g0569800 Oryza sativa ssp. japonica HOM05D000163 ORTHO05D000962 5.2e-07 58.5 130 33.8
Nn6g33411 Nelumbo nucifera HOM05D000163 ORTHO05D000962 6.7e-07 58.2 148 29.7
THA.LOC104802032 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 6.7e-07 58.2 125 30.4
Hund16650 Selenicereus undatus HOM05D000163 ORTHO05D000962 8.8e-07 57.8 127 29.1
Hund27271 Selenicereus undatus HOM05D000163 ORTHO05D000962 8.8e-07 57.8 167 30.5
AUR62004362 Chenopodium quinoa HOM05D000163 ORTHO05D000962 1.2e-06 57.4 130 30.8
BcaC02g07069 Brassica carinata HOM05D000163 ORTHO05D000962 1.5e-06 57.0 128 32.0
CiPaw.02G031500 Carya illinoinensis HOM05D000163 ORTHO05D000962 1.5e-06 57.0 125 30.4
Psat0s3230g0120 Pisum sativum HOM05D002645 ORTHO05D002741 1.5e-06 57.0 126 34.1
SEGI_11032 Sequoiadendron giganteum HOM05D002645 ORTHO05D002741 1.5e-06 57.0 80 42.5
THA.LOC104817293 Tarenaya hassleriana HOM05D000163 ORTHO05D000962 1.5e-06 57.0 126 35.7
Cpa.g.sc27.218 Carica papaya HOM05D002645 ORTHO05D002741 2.0e-06 56.6 135 29.6
CiPaw.10G082900 Carya illinoinensis HOM05D002645 ORTHO05D002741 2.0e-06 56.6 127 32.3
AUR62029412 Chenopodium quinoa HOM05D000163 ORTHO05D000962 2.0e-06 56.6 126 33.3
Medtr2g096850 Medicago truncatula HOM05D000163 ORTHO05D009543 2.0e-06 56.6 140 27.9
GSVIVG01026936001 Vitis vinifera HOM05D000163 ORTHO05D000962 2.0e-06 56.6 145 30.3
QL06p035865 Quercus lobata HOM05D000163 ORTHO05D007238 2.6e-06 56.2 132 33.3
Sp5g02010 Schrenkiella parvula HOM05D000163 ORTHO05D000962 2.6e-06 56.2 137 29.9
Nn1g01541 Nelumbo nucifera HOM05D000163 ORTHO05D000962 3.3e-06 55.8 138 30.4
Sed0010245 Sechium edule HOM05D002645 ORTHO05D002741 3.3e-06 55.8 125 34.4
CDE08G0092 Ceratophyllum demersum HOM05D000163 ORTHO05D000962 4.4e-06 55.5 132 28.8
AUR62022572 Chenopodium quinoa HOM05D000163 ORTHO05D000962 4.4e-06 55.5 124 29.0
FvH4_4g25760 Fragaria vesca HOM05D000426 ORTHO05D006588 4.4e-06 55.5 123 31.7
FAN12G2959 Fragaria x ananassa HOM05D000426 ORTHO05D006588 4.4e-06 55.5 123 31.7
Potri.002G160200 Populus trichocarpa HOM05D000163 ORTHO05D000962 4.4e-06 55.5 125 32.0
CSS0038925 Camellia sinensis var. sinensis HOM05D000163 ORTHO05D000962 5.7e-06 55.1 127 30.7
COL.COLO4_12716 Corchorus olitorius HOM05D000163 ORTHO05D000962 5.7e-06 55.1 124 30.6
HPP92_008495 Vanilla planifolia HOM05D000163 ORTHO05D000962 5.7e-06 55.1 132 28.0
VMungo1383G3455 Vigna mungo HOM05D000163 ORTHO05D000962 5.7e-06 55.1 135 32.6
Nn6g33410 Nelumbo nucifera HOM05D000163 ORTHO05D000962 7.5e-06 54.7 137 29.9
Thecc.01G358700 Theobroma cacao HOM05D000163 ORTHO05D000962 7.5e-06 54.7 124 28.2
AT3G61410 Arabidopsis thaliana HOM05D000163 ORTHO05D000962 9.7e-06 54.3 125 30.4
MELO3C007711.2 Cucumis melo HOM05D000163 ORTHO05D007238 9.7e-06 54.3 129 32.6
FAN21G2907 Fragaria x ananassa HOM05D000163 ORTHO05D009543 9.7e-06 54.3 120 30.0
Gohir.D11G093300 Gossypium hirsutum HOM05D000163 ORTHO05D000962 9.7e-06 54.3 118 33.9
Hma1.2p1_0001F.1_g001180 Hydrangea macrophylla HOM05D000163 ORTHO05D000962 9.7e-06 54.3 137 31.4
Potri.002G160300 Populus trichocarpa HOM05D000163 ORTHO05D000962 9.7e-06 54.3 121 32.2
TPR.G37712 Trifolium pratense HOM05D000163 ORTHO05D000962 9.7e-06 54.3 127 31.5


User provided reference genes

Program Settings