Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 0.0e+00 2153.6 1099 100.0
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 4.7e-131 473.4 851 38.0
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 4.4e-129 466.8 534 50.4
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 2.2e-128 464.5 1109 33.4
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 4.9e-128 463.4 1133 34.2
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 8.4e-128 462.6 1140 34.3
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 1.2e-126 458.8 784 38.8
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 5.6e-124 449.9 811 38.5
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 9.6e-124 449.1 816 37.1
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 1.3e-123 448.7 437 53.5
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.1e-123 448.0 826 37.7
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.1e-122 445.7 437 53.3
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 3.1e-122 444.1 791 37.7
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.2e-121 442.2 762 39.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-120 438.3 820 37.3
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.7e-120 438.3 764 38.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.2e-120 438.0 783 37.5
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 4.9e-120 436.8 783 37.5
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.4e-120 436.4 781 37.6
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 6.4e-120 436.4 791 39.1
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 8.4e-120 436.0 437 53.1
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 1.9e-119 434.9 438 51.8
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 4.2e-119 433.7 427 52.0
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 5.4e-119 433.3 437 51.9
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 1.2e-118 432.2 822 36.9
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.1e-118 431.4 432 53.5
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 2.7e-118 431.0 450 50.2
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 3.5e-118 430.6 822 35.4
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 3.5e-118 430.6 761 38.1
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 4.6e-118 430.3 450 52.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 6.0e-118 429.9 440 52.7
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.0e-118 429.9 431 54.1
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 1.0e-117 429.1 450 51.3
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 1.0e-117 429.1 455 51.2
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 6.6e-117 426.4 460 50.0
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 6.6e-117 426.4 792 37.5
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.5e-116 425.2 801 37.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 3.3e-116 424.1 810 36.5
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 4.3e-116 423.7 437 51.9
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 9.6e-116 422.5 806 36.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 1.6e-115 421.8 438 51.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.1e-115 421.4 434 50.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 2.8e-115 421.0 373 55.0
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 3.1e-114 417.5 448 49.3
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.0e-114 417.2 436 50.5
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 4.0e-114 417.2 439 50.6
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 9.0e-114 416.0 438 52.3
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 9.0e-114 416.0 438 52.3
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.5e-113 415.2 786 36.3
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 3.4e-113 414.1 788 37.2
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 7.6e-113 412.9 790 34.7
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 7.6e-113 412.9 435 51.7
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.3e-112 412.1 788 37.1
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.7e-112 411.8 437 50.6
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.2e-112 411.4 487 47.4
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.2e-112 411.4 824 34.6
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 6.4e-112 409.8 367 55.3
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 1.9e-111 408.3 439 49.9
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 3.2e-111 407.5 438 50.7
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 5.4e-111 406.8 1104 31.2
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 5.4e-111 406.8 798 35.6
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 9.3e-111 406.0 796 36.4
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 2.7e-110 404.4 444 47.7
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 4.6e-110 403.7 798 35.7
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 4.6e-110 403.7 459 48.1
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 7.9e-110 402.9 429 49.2
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.0e-109 402.5 1170 31.5
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 2.3e-109 401.4 438 50.0
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 2.3e-109 401.4 792 36.2
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 8.7e-109 399.4 439 49.4
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.1e-108 399.1 440 47.7
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 1.5e-108 398.7 437 48.7
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 1.5e-108 398.7 438 49.8
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 1.9e-108 398.3 447 47.4
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 1.3e-107 395.6 515 43.7
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 2.1e-107 394.8 788 34.8
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.8e-107 394.4 439 48.7
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 2.8e-107 394.4 435 49.0
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 1.4e-106 392.1 791 34.5
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 6.9e-106 389.8 459 47.9
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.2e-105 389.0 432 47.9
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 2.6e-105 387.9 433 49.2
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 4.5e-105 387.1 435 48.0
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 4.5e-105 387.1 435 48.0
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 4.5e-105 387.1 435 48.0
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 2.2e-104 384.8 435 49.2
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 3.8e-104 384.0 770 35.8
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 6.5e-104 383.3 396 51.8
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 1.4e-103 382.1 461 46.9
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 1.9e-103 381.7 442 47.7
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 3.2e-103 380.9 437 48.5
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 3.2e-103 380.9 443 46.5
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 4.2e-103 380.6 436 47.5
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 5.5e-103 380.2 434 47.0
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 7.1e-103 379.8 432 47.9
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 7.1e-103 379.8 803 34.5
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 7.1e-103 379.8 796 34.2
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 1.2e-102 379.0 437 48.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 2.7e-102 377.9 436 47.2
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 4.6e-102 377.1 435 46.4
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 7.9e-102 376.3 435 47.1
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 4.3e-100 370.5 436 47.2
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 9.6e-100 369.4 764 34.9
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 2.7e-94 351.3 453 43.7
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 6.7e-93 346.7 435 43.9
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.0e-85 322.8 389 45.2
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 2.6e-81 308.1 373 44.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.8e-77 295.4 358 46.9
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.7e-65 255.0 362 39.2
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 9.8e-60 236.5 164 66.5
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.5e-57 228.0 353 40.2
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 5.2e-53 214.2 435 34.7
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 2.6e-52 211.8 343 36.2
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 8.0e-38 163.7 177 50.3
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 3.2e-34 151.8 178 47.2
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.1e-26 126.7 155 45.2
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 1.1e-21 110.2 203 34.0
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 3.7e-19 101.7 310 25.8
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 3.7e-19 101.7 74 66.2
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.4e-18 99.8 76 64.5
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.3e-08 66.6 73 47.9
SEGI_40296 Sequoiadendron giganteum HOM05D002708 ORTHO05D026136 1.5e-07 63.2 47 61.7


User provided reference genes

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