Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19171 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.5e-212 741.1 500 100.0
SEGI_36600 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.7e-92 342.4 360 72.2
SEGI_26447 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.2e-91 340.5 393 64.9
SEGI_16104 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 5.4e-90 335.9 397 63.7
SEGI_04584 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.3e-85 320.5 286 79.0
SEGI_32166 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-84 317.8 364 65.9
SEGI_07068 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.7e-83 313.2 375 65.1
SEGI_23085 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.1e-71 275.0 471 51.6
SEGI_24045 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 9.6e-63 245.4 374 57.5
SEGI_35548 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 9.6e-63 245.4 375 56.3
SEGI_27966 Sequoiadendron giganteum HOM05D000005 ORTHO05D010920 3.1e-61 240.4 377 50.7
SEGI_36959 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 4.2e-58 229.9 209 71.8
SEGI_36128 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 1.5e-52 211.5 235 78.3
MD17G1275400 Malus domestica HOM05D000005 ORTHO05D000012 7.7e-12 76.3 328 23.2
MD17G1275900 Malus domestica HOM05D000005 ORTHO05D000012 1.0e-11 75.9 330 21.8
SEGI_35423 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.5e-11 72.8 148 39.2
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.5e-10 71.2 318 24.8
ATR0661G553 Amborella trichopoda HOM05D000005 ORTHO05D000012 3.2e-10 70.9 136 36.8
SEGI_25134 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 4.2e-10 70.5 152 34.9
Nn8g40975 Nelumbo nucifera HOM05D000005 ORTHO05D000012 5.5e-10 70.1 378 26.2
SEGI_29461 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 5.5e-10 70.1 151 35.1
SEGI_30160 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 7.2e-10 69.7 152 34.9
SEGI_40326 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 7.2e-10 69.7 152 34.9
Glyma.03G048500 Glycine max HOM05D000005 ORTHO05D000012 1.2e-09 68.9 362 23.5
SEGI_10881 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.1e-09 68.2 92 50.0
Nn8g40999 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.7e-09 67.8 516 24.4
SEGI_40354 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 2.7e-09 67.8 154 34.4
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 4.7e-09 67.0 320 24.1
TPR.G31909 Trifolium pratense HOM05D000005 ORTHO05D000012 4.7e-09 67.0 140 33.6
Thecc.02G237000 Theobroma cacao HOM05D000005 ORTHO05D000012 6.1e-09 66.6 189 28.0
Lsat_1_v5_gn_8_114401 Lactuca sativa HOM05D000005 ORTHO05D000012 7.9e-09 66.2 269 24.9
Lsat_1_v5_gn_8_114481 Lactuca sativa HOM05D000005 ORTHO05D000012 7.9e-09 66.2 269 26.4
Lj3C285T0 Lonicera japonica HOM05D000005 ORTHO05D007073 7.9e-09 66.2 145 33.1
Lj3C299T0 Lonicera japonica HOM05D000005 ORTHO05D007073 1.0e-08 65.9 145 33.8
Duzib268G1199 Durio zibethinus HOM05D000005 ORTHO05D000012 1.4e-08 65.5 184 28.8
SEGI_40481 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 1.8e-08 65.1 153 33.3
Lsat_1_v5_gn_8_112901 Lactuca sativa HOM05D000005 ORTHO05D000012 2.3e-08 64.7 271 25.1
Nn5g27819 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.3e-08 64.7 114 36.0
PGR142G3641 Punica granatum HOM05D000005 ORTHO05D000012 2.3e-08 64.7 145 31.7
CiPaw.14G075500 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.0e-08 64.3 149 34.2
CsaV3_5G039730 Cucumis sativus L. HOM05D000005 ORTHO05D014598 3.0e-08 64.3 320 24.4
Lj3A645T65 Lonicera japonica HOM05D000005 ORTHO05D007073 3.0e-08 64.3 150 32.7
Nn8g41085 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.0e-08 64.3 131 36.6
SEGI_04239 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 3.0e-08 64.3 142 33.8
SEGI_12021 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 3.0e-08 64.3 137 35.0
SEGI_28095 Sequoiadendron giganteum HOM05D000005 ORTHO05D000012 3.0e-08 64.3 142 33.8
BcaNung02640 Brassica carinata HOM05D000005 ORTHO05D000012 3.9e-08 63.9 383 24.0
Medtr8g037220 Medicago truncatula HOM05D000005 ORTHO05D000012 3.9e-08 63.9 141 32.6
Prupe.8G185200 Prunus persica HOM05D000005 ORTHO05D000012 5.1e-08 63.5 385 22.1
TPR.G36030 Trifolium pratense HOM05D000005 ORTHO05D000012 5.1e-08 63.5 137 34.3
Medtr6g015475 Medicago truncatula HOM05D000005 ORTHO05D000012 6.7e-08 63.2 144 34.0
Pp3c10_21680 Physcomitrium patens HOM05D000005 ORTHO05D000239 6.7e-08 63.2 108 34.3
Pp3c10_21693 Physcomitrium patens HOM05D000005 ORTHO05D000239 6.7e-08 63.2 108 34.3
Ciclev10024507m.g Citrus clementina HOM05D000005 ORTHO05D000012 8.8e-08 62.8 141 33.3
SEGI_34051 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 8.8e-08 62.8 161 57.1
Lsat_1_v5_gn_1_80200 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-07 62.4 358 23.7
Medtr7g091540 Medicago truncatula HOM05D000005 ORTHO05D000012 1.1e-07 62.4 141 31.9
Prupe.1G550800 Prunus persica HOM05D000005 ORTHO05D000012 1.1e-07 62.4 301 23.6
Sopen01g004310 Solanum pennellii HOM05D000005 ORTHO05D000012 1.1e-07 62.4 136 33.1
PGSC0003DMG400016808 Solanum tuberosum HOM05D000005 ORTHO05D000012 1.1e-07 62.4 138 31.9
TPR.G30444 Trifolium pratense HOM05D000005 ORTHO05D000012 1.1e-07 62.4 141 34.0
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.1e-07 62.4 324 29.0
Gohir.D02G168100 Gossypium hirsutum HOM05D000005 ORTHO05D000012 1.5e-07 62.0 179 28.5
Lsat_1_v5_gn_8_112080 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-07 62.0 281 24.9
MD10G1136100 Malus domestica HOM05D000005 ORTHO05D000012 1.5e-07 62.0 148 34.5
Medtr6g015675 Medicago truncatula HOM05D000005 ORTHO05D008900 1.5e-07 62.0 145 30.3
PGR042G3882 Punica granatum HOM05D000005 ORTHO05D000012 1.5e-07 62.0 141 33.3
Solyc01g008800.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 1.5e-07 62.0 136 33.1
arahy.Tifrunner.gnm1.ann1.2IZ0XP Arachis hypogaea HOM05D000005 ORTHO05D000012 2.0e-07 61.6 165 30.9
arahy.Tifrunner.gnm1.ann1.6223I5 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.0e-07 61.6 165 30.9
BraA02t05106Z Brassica rapa HOM05D000005 ORTHO05D000012 2.0e-07 61.6 354 24.0
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.0e-07 61.6 319 24.8
Medtr6g015490 Medicago truncatula HOM05D000005 ORTHO05D000012 2.0e-07 61.6 141 34.0
SEGI_33953 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.0e-07 61.6 232 38.4
MD17G1025000 Malus domestica HOM05D000005 ORTHO05D000012 2.6e-07 61.2 145 32.4
PGR142G3011 Punica granatum HOM05D000005 ORTHO05D000012 2.6e-07 61.2 145 30.3
arahy.Tifrunner.gnm1.ann1.3Z2FFP Arachis hypogaea HOM05D000005 ORTHO05D000012 3.3e-07 60.8 163 29.4
arahy.Tifrunner.gnm1.ann1.6UQ1FU Arachis hypogaea HOM05D000005 ORTHO05D000294 3.3e-07 60.8 211 27.5
Duzib268G0999 Durio zibethinus HOM05D000005 ORTHO05D000012 3.3e-07 60.8 180 27.8
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.3e-07 60.8 277 23.5
Gohir.A03G144800 Gossypium hirsutum HOM05D000005 ORTHO05D000012 3.3e-07 60.8 181 29.3
Nn5g27647 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.3e-07 60.8 141 35.5
PGSC0003DMG400022699 Solanum tuberosum HOM05D000005 ORTHO05D000012 3.3e-07 60.8 119 34.5
TPR.G4332 Trifolium pratense HOM05D000005 ORTHO05D000012 3.3e-07 60.8 116 32.8
ATR0564G383 Amborella trichopoda HOM05D000005 ORTHO05D026553 4.4e-07 60.5 103 36.9
ATR1152G081 Amborella trichopoda HOM05D000005 ORTHO05D000012 4.4e-07 60.5 143 32.9
arahy.Tifrunner.gnm1.ann1.J60GAE Arachis hypogaea HOM05D000005 ORTHO05D000012 4.4e-07 60.5 163 28.8
Glyma.03G075300 Glycine max HOM05D000005 ORTHO05D000012 4.4e-07 60.5 146 32.9
Lj1g0006454 Lotus japonicus HOM05D000005 ORTHO05D000012 4.4e-07 60.5 141 31.9
MD02G1306900 Malus domestica HOM05D000005 ORTHO05D000012 4.4e-07 60.5 204 24.5
PGR031G3491 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 141 29.1
PGR142G2421 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 183 29.5
PGR142G2950 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 179 28.5
PGR142G3252 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 179 28.5
PGR142G4245 Punica granatum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 179 28.5
PGSC0003DMG402016979 Solanum tuberosum HOM05D000005 ORTHO05D000012 4.4e-07 60.5 136 33.1
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.7e-07 60.1 316 25.0
CANSAT78G1585 Cannabis sativa HOM05D000005 ORTHO05D000012 5.7e-07 60.1 142 33.1
TPR.G5187 Trifolium pratense HOM05D000005 ORTHO05D000012 5.7e-07 60.1 218 25.7
Lsat_1_v5_gn_8_112841 Lactuca sativa HOM05D000005 ORTHO05D000012 7.4e-07 59.7 268 24.3
Lj3A119G28 Lonicera japonica HOM05D000005 ORTHO05D007073 7.4e-07 59.7 106 39.6
MD10G1040800 Malus domestica HOM05D000005 ORTHO05D000012 7.4e-07 59.7 159 29.6
TPR.G25384 Trifolium pratense HOM05D000005 ORTHO05D000012 7.4e-07 59.7 143 32.9
TPR.G4302 Trifolium pratense HOM05D000005 ORTHO05D000012 7.4e-07 59.7 141 33.3
TWI12G0796 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 7.4e-07 59.7 128 32.0
ATR0564G506 Amborella trichopoda HOM05D000005 ORTHO05D026569 9.7e-07 59.3 105 35.2
arahy.Tifrunner.gnm1.ann1.Y2N0N5 Arachis hypogaea HOM05D000005 ORTHO05D000012 9.7e-07 59.3 107 33.6
ECA248G0633 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.7e-07 59.3 275 24.4
Glyma.01G112300 Glycine max HOM05D000005 ORTHO05D000012 9.7e-07 59.3 142 33.1
Medtr6g015730 Medicago truncatula HOM05D000005 ORTHO05D000012 9.7e-07 59.3 141 30.5
Pp3c10_15970 Physcomitrium patens HOM05D000005 ORTHO05D000239 9.7e-07 59.3 99 34.3
SEGI_22567 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 9.7e-07 59.3 121 47.9
Aa31LG7G8010 Aethionema arabicum HOM05D000005 ORTHO05D000012 1.3e-06 58.9 110 31.8
ATR0177G005 Amborella trichopoda HOM05D000005 ORTHO05D000012 1.3e-06 58.9 154 33.1
Eucgr.D00735 Eucalyptus grandis HOM05D000005 ORTHO05D000012 1.3e-06 58.9 197 31.0
Gorai.005G188600 Gossypium raimondii HOM05D000005 ORTHO05D000012 1.3e-06 58.9 179 27.9
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-06 58.9 263 24.3
Lj3g0009889 Lotus japonicus HOM05D000005 ORTHO05D000012 1.3e-06 58.9 150 31.3
Lj3g0018399 Lotus japonicus HOM05D000005 ORTHO05D000012 1.3e-06 58.9 141 31.2
Medtr6g015750 Medicago truncatula HOM05D000005 ORTHO05D000012 1.3e-06 58.9 147 33.3
Phvul.010G008700 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.3e-06 58.9 144 31.9
RcHm_v2.0_Chr4g0429701 Rosa chinensis HOM05D000005 ORTHO05D000012 1.3e-06 58.9 144 32.6
Glyma.01G112200 Glycine max HOM05D000005 ORTHO05D000012 1.7e-06 58.5 141 32.6
Lsat_1_v5_gn_9_58521 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-06 58.5 280 23.9
Lj7A434T48 Lonicera japonica HOM05D000005 ORTHO05D007073 1.7e-06 58.5 109 34.9
Prupe.8G185300 Prunus persica HOM05D000005 ORTHO05D000012 1.7e-06 58.5 322 23.3
PGR142G4113 Punica granatum HOM05D000005 ORTHO05D000012 1.7e-06 58.5 138 33.3
TPR.G4324 Trifolium pratense HOM05D000005 ORTHO05D000012 1.7e-06 58.5 131 33.6
Atru.chr2.279 Acer truncatum HOM05D000005 ORTHO05D000012 2.2e-06 58.2 151 32.5
Gorai.005G188300 Gossypium raimondii HOM05D000005 ORTHO05D000012 2.2e-06 58.2 149 29.5
PGR004G1514 Punica granatum HOM05D000005 ORTHO05D007073 2.2e-06 58.2 136 32.4
arahy.Tifrunner.gnm1.ann1.BBI6IF Arachis hypogaea HOM05D000005 ORTHO05D000012 2.8e-06 57.8 162 27.8
arahy.Tifrunner.gnm1.ann1.DW1R6S Arachis hypogaea HOM05D000005 ORTHO05D000012 2.8e-06 57.8 107 32.7
Ciclev10024544m.g Citrus clementina HOM05D000005 ORTHO05D000012 2.8e-06 57.8 168 27.4
Lj3A419T49 Lonicera japonica HOM05D000005 ORTHO05D007073 2.8e-06 57.8 152 32.2
Lju1058C1T2 Lonicera japonica HOM05D000005 ORTHO05D007073 2.8e-06 57.8 108 37.0
Lj3g0020086 Lotus japonicus HOM05D000005 ORTHO05D000012 2.8e-06 57.8 150 31.3
MD10G1040000 Malus domestica HOM05D000005 ORTHO05D000012 2.8e-06 57.8 360 21.4
Medtr0468s0010 Medicago truncatula HOM05D000005 ORTHO05D000012 2.8e-06 57.8 138 31.9
Nn8g41114 Nelumbo nucifera HOM05D000005 ORTHO05D000012 2.8e-06 57.8 105 32.4
PGR044G1211 Punica granatum HOM05D000005 ORTHO05D011459 2.8e-06 57.8 142 35.2
PGR142G2663 Punica granatum HOM05D000005 ORTHO05D000012 2.8e-06 57.8 179 28.5
A02p01270 Brassica napus HOM05D000005 ORTHO05D000012 3.7e-06 57.4 146 30.8
CiPaw.11G197700 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.7e-06 57.4 259 25.9
Ciclev10024179m.g Citrus clementina HOM05D000005 ORTHO05D000012 3.7e-06 57.4 145 29.7
ECA248G2355 Erigeron canadensis HOM05D000419 ORTHO05D001071 3.7e-06 57.4 320 23.4
FAN01G0351 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.7e-06 57.4 280 23.2
Glyma.03G077400 Glycine max HOM05D000005 ORTHO05D000012 3.7e-06 57.4 141 33.3
Lj3A414G28 Lonicera japonica HOM05D000005 ORTHO05D007073 3.7e-06 57.4 103 37.9
Potri.005G206400 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.7e-06 57.4 144 32.6
SEGI_17286 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 3.7e-06 57.4 93 45.2
Ciclev10018707m.g Citrus clementina HOM05D000005 ORTHO05D000012 4.8e-06 57.0 175 30.9
Dinv24936 Davidia involucrata HOM05D000005 ORTHO05D000012 4.8e-06 57.0 137 29.9
Thhalv10023218m.g Eutrema salsugineum HOM05D000005 ORTHO05D000012 4.8e-06 57.0 148 27.7
Lj7A431G89 Lonicera japonica HOM05D000005 ORTHO05D017002 4.8e-06 57.0 102 34.3
Lj3g0020080 Lotus japonicus HOM05D000005 ORTHO05D000012 4.8e-06 57.0 164 29.3
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 4.8e-06 57.0 322 26.1
Medtr0294s0010 Medicago truncatula HOM05D000005 ORTHO05D000012 4.8e-06 57.0 145 33.1
Nn8g40955 Nelumbo nucifera HOM05D000005 ORTHO05D000012 4.8e-06 57.0 138 31.2
PGR142G3250 Punica granatum HOM05D000005 ORTHO05D000012 4.8e-06 57.0 179 27.9
QL03p067844 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-06 57.0 132 31.8
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 6.3e-06 56.6 146 30.1
CSS0045795 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.3e-06 56.6 163 27.0
CANSAT54G2110 Cannabis sativa HOM05D000005 ORTHO05D000012 6.3e-06 56.6 123 34.1
Ca_23336_v3 Cicer arietinum L. HOM05D000005 ORTHO05D000012 6.3e-06 56.6 340 23.2
COL.COLO4_20238 Corchorus olitorius HOM05D000005 ORTHO05D000012 6.3e-06 56.6 159 30.8
FAN13G2462 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.3e-06 56.6 145 31.0
MD09G1024200 Malus domestica HOM05D000005 ORTHO05D000012 6.3e-06 56.6 145 27.6
MD17G1025900 Malus domestica HOM05D000005 ORTHO05D000012 6.3e-06 56.6 145 31.7
TAR371G0085 Trochodendron aralioides HOM05D000005 ORTHO05D000012 6.3e-06 56.6 145 28.3
VMungo0331G1959 Vigna mungo HOM05D000005 ORTHO05D000012 6.3e-06 56.6 116 35.3
VMungo0331G1973 Vigna mungo HOM05D000005 ORTHO05D000012 6.3e-06 56.6 113 32.7
ATR0564G415 Amborella trichopoda HOM05D000005 ORTHO05D026569 8.2e-06 56.2 105 34.3
Medtr6g015510 Medicago truncatula HOM05D000005 ORTHO05D000012 8.2e-06 56.2 141 31.9
Prupe.7G065400 Prunus persica HOM05D000005 ORTHO05D000012 8.2e-06 56.2 143 31.5


User provided reference genes

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