Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 1.8e-45 185.7 99 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 1.7e-27 125.9 89 76.4
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 2.2e-27 125.6 97 68.0
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 1.4e-26 122.9 87 72.4
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 3.2e-26 121.7 98 66.3
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 4.1e-26 121.3 86 75.6
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.2e-26 120.2 89 73.0
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 9.2e-26 120.2 89 73.0
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 2.0e-25 119.0 81 74.1
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 2.0e-25 119.0 85 70.6
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 2.0e-25 119.0 106 63.2
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 2.0e-25 119.0 86 69.8
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 2.7e-25 118.6 98 64.3
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 2.7e-25 118.6 85 69.4
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 5.9e-25 117.5 87 69.0
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 5.9e-25 117.5 93 64.5
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 7.8e-25 117.1 87 67.8
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 7.8e-25 117.1 87 70.1
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 7.8e-25 117.1 86 68.6
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 7.8e-25 117.1 75 78.7
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 7.8e-25 117.1 76 77.6
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 1.0e-24 116.7 73 78.1
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.0e-24 116.7 84 70.2
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 1.0e-24 116.7 87 67.8
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 1.0e-24 116.7 84 70.2
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.0e-24 116.7 95 65.3
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.3e-24 116.3 86 67.4
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.3e-24 116.3 86 67.4
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.3e-24 116.3 76 73.7
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 1.3e-24 116.3 94 64.9
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.7e-24 115.9 97 68.0
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 1.7e-24 115.9 89 73.0
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 1.7e-24 115.9 81 71.6
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 3.0e-24 115.2 73 76.7
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.0e-24 115.2 84 71.4
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 3.0e-24 115.2 84 71.4
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 3.0e-24 115.2 84 71.4
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 3.9e-24 114.8 73 76.7
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 3.9e-24 114.8 76 73.7
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 3.9e-24 114.8 83 68.7
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 5.0e-24 114.4 73 75.3
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 5.0e-24 114.4 96 62.5
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 6.6e-24 114.0 87 69.0
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 6.6e-24 114.0 73 74.0
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 6.6e-24 114.0 78 71.8
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 8.6e-24 113.6 85 67.1
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 8.6e-24 113.6 78 71.8
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 8.6e-24 113.6 78 71.8
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.1e-23 113.2 73 75.3
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.5e-23 112.8 84 66.7
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 1.5e-23 112.8 75 76.0
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.5e-23 112.8 87 66.7
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 1.9e-23 112.5 98 60.2
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 1.9e-23 112.5 83 69.9
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.9e-23 112.5 95 62.1
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 1.9e-23 112.5 86 66.3
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.9e-23 112.5 76 71.1
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.9e-23 112.5 76 71.1
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.9e-23 112.5 81 69.1
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 1.9e-23 112.5 95 65.3
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 2.5e-23 112.1 76 71.1
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 2.5e-23 112.1 76 71.1
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 3.3e-23 111.7 73 72.6
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 3.3e-23 111.7 73 72.6
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 3.3e-23 111.7 81 66.7
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 3.3e-23 111.7 81 69.1
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 3.3e-23 111.7 81 69.1
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 3.3e-23 111.7 84 66.7
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 4.3e-23 111.3 87 65.5
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 4.3e-23 111.3 78 70.5
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 4.3e-23 111.3 76 69.7
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 4.3e-23 111.3 76 71.1
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 4.3e-23 111.3 76 73.7
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 4.3e-23 111.3 86 66.3
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 4.3e-23 111.3 72 73.6
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 4.3e-23 111.3 80 68.8
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 5.6e-23 110.9 76 72.4
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 5.6e-23 110.9 76 72.4
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 7.3e-23 110.5 81 65.4
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 7.3e-23 110.5 81 65.4
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 7.3e-23 110.5 81 69.1
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 7.3e-23 110.5 81 69.1
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 7.3e-23 110.5 76 68.4
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 9.5e-23 110.2 72 75.0
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 1.2e-22 109.8 76 69.7
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 1.2e-22 109.8 73 74.0
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.2e-22 109.8 72 73.6
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.6e-22 109.4 85 65.9
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 1.6e-22 109.4 84 67.9
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 1.6e-22 109.4 85 64.7
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 1.6e-22 109.4 76 69.7
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 1.6e-22 109.4 81 70.4
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 2.1e-22 109.0 87 64.4
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 2.1e-22 109.0 87 66.7
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.1e-22 109.0 83 67.5
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 2.8e-22 108.6 73 72.6
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 2.8e-22 108.6 87 63.2
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 2.8e-22 108.6 76 69.7
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 3.6e-22 108.2 94 63.8
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 3.6e-22 108.2 85 65.9
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 3.6e-22 108.2 85 65.9
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 4.7e-22 107.8 84 65.5
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 4.7e-22 107.8 73 69.9
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.7e-22 107.8 72 73.6
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.7e-22 107.8 72 73.6
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 4.7e-22 107.8 73 68.5
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 6.2e-22 107.5 87 67.8
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 8.0e-22 107.1 94 63.8
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.1e-21 106.7 85 62.4
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.1e-21 106.7 83 65.1
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.8e-21 105.9 94 62.8
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 1.8e-21 105.9 88 61.4
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 1.8e-21 105.9 84 65.5
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 1.8e-21 105.9 91 62.6
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.3e-21 105.5 88 63.6
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-21 105.5 83 63.9
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 2.3e-21 105.5 83 63.9
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 2.3e-21 105.5 83 63.9
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 2.3e-21 105.5 83 63.9
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 2.3e-21 105.5 83 63.9
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 4.0e-21 104.8 86 66.3
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 8.9e-21 103.6 84 63.1
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 1.2e-20 103.2 83 65.1
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 1.5e-20 102.8 85 64.7
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.5e-20 102.8 92 63.0
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 2.6e-20 102.1 72 72.2
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 3.4e-20 101.7 110 55.5
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 1.9e-18 95.9 96 56.2
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 4.1e-18 94.7 77 64.9
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 1.3e-16 89.7 86 59.3
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 4.3e-15 84.7 134 40.3
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 5.2e-13 77.8 63 63.5
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 1.2e-12 76.6 80 56.2
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 5.8e-12 74.3 161 33.5
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.2e-11 72.4 42 73.8
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 3.7e-11 71.6 68 60.3
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 3.7e-11 71.6 71 53.5
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 8.3e-11 70.5 84 51.2
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 8.3e-11 70.5 84 51.2
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 8.3e-11 70.5 84 51.2
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 1.6e-09 66.2 39 71.8
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 1.6e-09 66.2 39 71.8
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 2.7e-09 65.5 34 76.5
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 5.1e-08 61.2 195 27.7
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.9e-07 59.3 63 58.7
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 8.1e-06 53.9 109 36.7


User provided reference genes

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