Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19160 Sequoiadendron giganteum HOM05D000976 ORTHO05D012943 1.9e-116 422.5 212 100.0
SEGI_18343 Sequoiadendron giganteum HOM05D000224 ORTHO05D000337 1.3e-29 134.0 92 65.2
SEGI_26021 Sequoiadendron giganteum HOM05D002128 ORTHO05D012943 4.9e-16 89.0 58 67.2
SEGI_13486 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.4e-15 86.7 59 66.1
Aqoxy7G00865 Aquilegia oxysepala HOM05D000976 ORTHO05D000847 6.4e-08 62.0 60 51.7
Dinv43608 Davidia involucrata HOM05D000976 ORTHO05D000847 1.1e-07 61.2 60 50.0
Potri.002G138700 Populus trichocarpa HOM05D000976 ORTHO05D000847 1.1e-07 61.2 61 50.8
Potri.014G049800 Populus trichocarpa HOM05D000976 ORTHO05D000847 1.1e-07 61.2 61 49.2
Sabra14G0035300 Salix brachista HOM05D000976 ORTHO05D000847 1.1e-07 61.2 61 49.2
Gohir.A08G029100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 1.8e-07 60.5 61 52.5
Actinidia12641 Actinidia chinensis HOM05D000976 ORTHO05D000847 3.2e-07 59.7 62 51.6
TAR375G0539 Trochodendron aralioides HOM05D000976 ORTHO05D000847 3.2e-07 59.7 60 51.7
CSS0010020 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 7.0e-07 58.5 58 51.7
CSS0046025 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 7.0e-07 58.5 58 51.7
Duzib133G0139 Durio zibethinus HOM05D000976 ORTHO05D000847 7.0e-07 58.5 60 48.3
Duzib138G0417 Durio zibethinus HOM05D000976 ORTHO05D000847 7.0e-07 58.5 60 48.3
MBI04_g13837_MAGBIO Magnolia biondii HOM05D000976 ORTHO05D000847 7.0e-07 58.5 64 50.0
MD07G1110100 Malus domestica HOM05D000976 ORTHO05D000847 7.0e-07 58.5 57 50.9
arahy.Tifrunner.gnm1.ann1.8V1V91 Arachis hypogaea HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 50.0
arahy.Tifrunner.gnm1.ann1.WS6V9H Arachis hypogaea HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 50.0
CiPaw.14G019700 Carya illinoinensis HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
COL.COLO4_12395 Corchorus olitorius HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
Eucgr.D01221 Eucalyptus grandis HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
FAN03G3285 Fragaria x ananassa HOM05D000976 ORTHO05D000847 9.2e-07 58.2 61 47.5
Gorai.004G038600 Gossypium raimondii HOM05D000976 ORTHO05D000847 9.2e-07 58.2 61 50.8
Nitab4.5_0000563g0270 Nicotiana tabacum HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
Nitab4.5_0003596g0020 Nicotiana tabacum HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
Oeu037448.3 Olea europaea HOM05D000976 ORTHO05D000847 9.2e-07 58.2 59 54.2
Thecc.01G396300 Theobroma cacao HOM05D000976 ORTHO05D000847 9.2e-07 58.2 60 48.3
CAN.G1585.15 Capsicum annuum HOM05D000976 ORTHO05D000847 1.2e-06 57.8 60 48.3
Ciclev10021713m.g Citrus clementina HOM05D000976 ORTHO05D000847 1.2e-06 57.8 63 52.4
FvH4_7g10390 Fragaria vesca HOM05D000976 ORTHO05D000847 1.2e-06 57.8 61 47.5
FAN06G0713 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.2e-06 57.8 61 47.5
FAN06G3652 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.2e-06 57.8 61 47.5
FAN10G0608 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.2e-06 57.8 61 47.5
RcHm_v2.0_Chr1g0348091 Rosa chinensis HOM05D000976 ORTHO05D000847 1.2e-06 57.8 61 47.5
Hund17100 Selenicereus undatus HOM05D000976 ORTHO05D000847 1.2e-06 57.8 58 50.0
CSS0008618 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 1.6e-06 57.4 60 48.3
CSS0022537 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 1.6e-06 57.4 60 48.3
ATR0665G109 Amborella trichopoda HOM05D000976 ORTHO05D000847 2.0e-06 57.0 62 48.4
MSTRG.17122 Avicennia marina HOM05D000976 ORTHO05D000847 2.0e-06 57.0 56 53.6
Cfa011060 Carpinus fangiana HOM05D000976 ORTHO05D000847 2.0e-06 57.0 60 46.7
Haze_02861 Corylus avellana HOM05D000976 ORTHO05D000847 2.0e-06 57.0 60 46.7
QL04p029897 Quercus lobata HOM05D000976 ORTHO05D000847 2.0e-06 57.0 60 46.7
Aqoxy3G02677 Aquilegia oxysepala HOM05D000976 ORTHO05D000847 2.7e-06 56.6 61 50.8
CiPaw.13G025300 Carya illinoinensis HOM05D000976 ORTHO05D000847 2.7e-06 56.6 60 46.7
AUR62013754 Chenopodium quinoa HOM05D000976 ORTHO05D000847 2.7e-06 56.6 59 49.2
AUR62023397 Chenopodium quinoa HOM05D000976 ORTHO05D000847 2.7e-06 56.6 59 49.2
Migut.B01517 Erythranthe guttata HOM05D000976 ORTHO05D000847 2.7e-06 56.6 57 54.4
FAN10G1463 Fragaria x ananassa HOM05D000976 ORTHO05D000847 2.7e-06 56.6 61 45.9
Manes.05G055900 Manihot esculenta HOM05D000976 ORTHO05D000847 2.7e-06 56.6 60 46.7
PSO675G8836 Papaver somniferum HOM05D000976 ORTHO05D000847 2.7e-06 56.6 62 45.2
PSO732G0753 Papaver somniferum HOM05D000976 ORTHO05D000847 2.7e-06 56.6 62 45.2
TAR374G1683 Trochodendron aralioides HOM05D000976 ORTHO05D000847 2.7e-06 56.6 63 46.0
Actinidia21632 Actinidia chinensis HOM05D000976 ORTHO05D000847 3.5e-06 56.2 62 48.4
Lj1g0022740 Lotus japonicus HOM05D000976 ORTHO05D000847 3.5e-06 56.2 61 50.8
Medtr7g081300 Medicago truncatula HOM05D000976 ORTHO05D000847 3.5e-06 56.2 61 49.2
Solyc01g089980.4 Solanum lycopersicum HOM05D000976 ORTHO05D000847 3.5e-06 56.2 60 46.7
Sopen01g035840 Solanum pennellii HOM05D000976 ORTHO05D000847 3.5e-06 56.2 60 46.7
PGSC0003DMG402031176 Solanum tuberosum HOM05D000976 ORTHO05D000847 3.5e-06 56.2 60 46.7
Ah.05g177930 Amaranthus hybridus HOM05D000976 ORTHO05D000847 4.6e-06 55.8 54 53.7
ClCG06G002460 Citrullus lanatus HOM05D000976 ORTHO05D000847 4.6e-06 55.8 56 50.0
CsaV3_6G008670 Cucumis sativus L. HOM05D000976 ORTHO05D000847 4.6e-06 55.8 56 50.0
Gohir.A08G057800 Gossypium hirsutum HOM05D000976 ORTHO05D000847 4.6e-06 55.8 60 46.7
Gohir.D08G067100 Gossypium hirsutum HOM05D000976 ORTHO05D000847 4.6e-06 55.8 60 46.7
Gorai.004G069700 Gossypium raimondii HOM05D000976 ORTHO05D000847 4.6e-06 55.8 60 46.7
Lalb_Chr03g0040691 Lupinus albus HOM05D000976 ORTHO05D000847 4.6e-06 55.8 58 48.3
Peaxi162Scf00853g00016 Petunia axillaris HOM05D000976 ORTHO05D000847 4.6e-06 55.8 57 52.6
EL10Ac1g00749 Beta vulgaris HOM05D000976 ORTHO05D000847 5.9e-06 55.5 59 45.8
Hma1.2p1_0632F.1_g192430 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 5.9e-06 55.5 60 46.7
Psat3g053560 Pisum sativum HOM05D000976 ORTHO05D000847 5.9e-06 55.5 62 46.8
Sp1g00130 Schrenkiella parvula HOM05D000976 ORTHO05D000847 5.9e-06 55.5 62 45.2
TPR.G29109 Trifolium pratense HOM05D000976 ORTHO05D000847 5.9e-06 55.5 61 49.2
VMungo1383G1929 Vigna mungo HOM05D000976 ORTHO05D000847 5.9e-06 55.5 61 49.2
MSTRG.20681 Avicennia marina HOM05D000976 ORTHO05D000847 7.8e-06 55.1 56 48.2
Cc02_g25180 Coffea canephora HOM05D000976 ORTHO05D000847 7.8e-06 55.1 56 51.8
Phvul.010G045300 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 7.8e-06 55.1 59 44.1
Rhsim07G0037200 Rhododendron simsii HOM05D000976 ORTHO05D000847 7.8e-06 55.1 59 45.8
TPR.G32149 Trifolium pratense HOM05D000976 ORTHO05D000847 7.8e-06 55.1 59 47.5
VMungo0331G1515 Vigna mungo HOM05D000976 ORTHO05D000847 7.8e-06 55.1 59 44.1


User provided reference genes

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