Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18957 Sequoiadendron giganteum HOM05D005623 ORTHO05D007130 3.3e-42 174.5 80 100.0
CiPaw.04G152100 Carya illinoinensis HOM05D005623 ORTHO05D007130 5.7e-18 94.0 49 83.7
QL02p063259 Quercus lobata HOM05D005623 ORTHO05D007130 5.7e-18 94.0 49 83.7
TWI34G0204 Tripterygium wilfordii HOM05D005623 ORTHO05D007130 5.7e-18 94.0 49 83.7
Lj4A313G21 Lonicera japonica HOM05D005623 ORTHO05D007130 7.4e-18 93.6 49 81.6
Ciclev10007793m.g Citrus clementina HOM05D005623 ORTHO05D007130 1.3e-17 92.8 49 81.6
Phvul.002G304900 Phaseolus vulgaris HOM05D005623 ORTHO05D007130 1.3e-17 92.8 49 81.6
VMungo0251G2698 Vigna mungo HOM05D005623 ORTHO05D007130 1.3e-17 92.8 49 81.6
Dinv42293 Davidia involucrata HOM05D005623 ORTHO05D007130 1.7e-17 92.4 49 81.6
Manes.16G104200 Manihot esculenta HOM05D005623 ORTHO05D007130 1.7e-17 92.4 49 81.6
Potri.006G149500 Populus trichocarpa HOM05D005623 ORTHO05D007130 1.7e-17 92.4 49 81.6
vmacro10811 Vaccinium macrocarpon HOM05D005623 ORTHO05D007130 1.7e-17 92.4 49 81.6
Ca_17399_v3 Cicer arietinum L. HOM05D005623 ORTHO05D007130 2.2e-17 92.0 49 79.6
Glyma.05G222900 Glycine max HOM05D005623 ORTHO05D007130 2.8e-17 91.7 49 79.6
Nitab4.5_0007297g0030 Nicotiana tabacum HOM05D005623 ORTHO05D007130 2.8e-17 91.7 49 79.6
Peaxi162Scf00264g00083 Petunia axillaris HOM05D005623 ORTHO05D007130 2.8e-17 91.7 49 79.6
Solyc07g026960.3 Solanum lycopersicum HOM05D005623 ORTHO05D007130 2.8e-17 91.7 49 79.6
Sopen07g014810 Solanum pennellii HOM05D005623 ORTHO05D007130 2.8e-17 91.7 49 79.6
CSS0001651 Camellia sinensis var. sinensis HOM05D005623 ORTHO05D007130 3.7e-17 91.3 49 79.6
Gohir.D06G069700 Gossypium hirsutum HOM05D005623 ORTHO05D007130 3.7e-17 91.3 49 79.6
Gorai.010G081300 Gossypium raimondii HOM05D005623 ORTHO05D007130 3.7e-17 91.3 49 79.6
Atru.chr7.1542 Acer truncatum HOM05D005623 ORTHO05D007130 4.8e-17 90.9 49 79.6
Cfa003118 Carpinus fangiana HOM05D005623 ORTHO05D007130 6.3e-17 90.5 49 79.6
Actinidia25269 Actinidia chinensis HOM05D005623 ORTHO05D007130 8.2e-17 90.1 49 79.6
Aa31LG2G20980 Aethionema arabicum HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
arahy.Tifrunner.gnm1.ann1.G7AZGE Arachis hypogaea HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
EL10Ac8g19268 Beta vulgaris HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
Migut.J00444 Erythranthe guttata HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
Medtr8g101730 Medicago truncatula HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
Thecc.09G093300 Theobroma cacao HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
TPR.G25466 Trifolium pratense HOM05D005623 ORTHO05D007130 1.1e-16 89.7 49 77.6
CANSAT56G1243 Cannabis sativa HOM05D005623 ORTHO05D007130 1.4e-16 89.4 49 79.6
MSTRG.6040 Avicennia marina HOM05D005623 ORTHO05D007130 1.8e-16 89.0 49 77.6
Eucgr.C03666 Eucalyptus grandis HOM05D005623 ORTHO05D007130 1.8e-16 89.0 49 79.6
Rhsim05G0035400 Rhododendron simsii HOM05D005623 ORTHO05D007130 1.8e-16 89.0 49 77.6
Sc14g0000790 Simmondsia chinensis HOM05D005623 ORTHO05D007130 1.8e-16 89.0 49 77.6
GSVIVG01015237001 Vitis vinifera HOM05D005623 ORTHO05D007130 1.8e-16 89.0 49 79.6
AUR62031248 Chenopodium quinoa HOM05D005623 ORTHO05D007130 2.4e-16 88.6 49 77.6
MBI04_g11706_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 2.4e-16 88.6 49 77.6
Sed0005617 Sechium edule HOM05D005623 ORTHO05D007130 2.4e-16 88.6 49 77.6
PSO210G1449 Papaver somniferum HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 77.6
PSO210G3522 Papaver somniferum HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 77.6
Psat7g019640 Pisum sativum HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 75.5
Prupe.7G213700 Prunus persica HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 79.6
TAR624G0131 Trochodendron aralioides HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 79.6
unitig_26.g9166 Utricularia gibba HOM05D005623 ORTHO05D007130 3.1e-16 88.2 49 77.6
CsaV3_1G040190 Cucumis sativus L. HOM05D005623 ORTHO05D007130 4.1e-16 87.8 49 75.5
CsaV3_UNG058470 Cucumis sativus L. HOM05D005623 ORTHO05D007130 4.1e-16 87.8 49 75.5
Gohir.A06G071000 Gossypium hirsutum HOM05D005623 ORTHO05D007130 4.1e-16 87.8 49 75.5
MD15G1203700 Malus domestica HOM05D005623 ORTHO05D007130 4.1e-16 87.8 49 77.6
Oeu000326.2 Olea europaea HOM05D005623 ORTHO05D007130 4.1e-16 87.8 49 75.5
Ah.14g086080 Amaranthus hybridus HOM05D005623 ORTHO05D007130 5.3e-16 87.4 49 77.6
MELO3C015446.2 Cucumis melo HOM05D005623 ORTHO05D007130 5.3e-16 87.4 49 75.5
ATR0789G174 Amborella trichopoda HOM05D005623 ORTHO05D007130 7.0e-16 87.0 49 75.5
COL.COLO4_18232 Corchorus olitorius HOM05D005623 ORTHO05D007130 7.0e-16 87.0 49 75.5
PGR102G2538 Punica granatum HOM05D005623 ORTHO05D007130 7.0e-16 87.0 49 77.6
THA.LOC104814603 Tarenaya hassleriana HOM05D005623 ORTHO05D007130 7.0e-16 87.0 49 73.5
SalBow6G5356 Salvia bowleyana HOM05D005623 ORTHO05D007130 9.1e-16 86.7 49 75.5
HPP92_000613 Vanilla planifolia HOM05D005623 ORTHO05D007130 9.1e-16 86.7 49 75.5
Cpa.g.sc78.66 Carica papaya HOM05D005623 ORTHO05D007130 1.2e-15 86.3 49 77.6
Cc06_g11060 Coffea canephora HOM05D005623 ORTHO05D007130 1.2e-15 86.3 49 73.5
Lalb_Chr16g0390941 Lupinus albus HOM05D005623 ORTHO05D007130 1.2e-15 86.3 48 77.1
Lalb_Chr05g0223571 Lupinus albus HOM05D005623 ORTHO05D007130 1.6e-15 85.9 49 73.5
MBI16_g12463_MAGBIO Magnolia biondii HOM05D005623 ORTHO05D007130 1.6e-15 85.9 49 71.4
Nn8g38917 Nelumbo nucifera HOM05D005623 ORTHO05D007130 1.6e-15 85.9 49 75.5
BcaC09g51737 Brassica carinata HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
A01p08540 Brassica napus HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
C01p09970 Brassica napus HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
BolC1t00959H Brassica oleracea HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
BraA01t00803Z Brassica rapa HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
Zm00001eb239790 Zea mays HOM05D005623 ORTHO05D007130 2.0e-15 85.5 49 73.5
FvH4_1g06970 Fragaria vesca HOM05D005623 ORTHO05D007130 2.6e-15 85.1 49 75.5
FAN19G1723 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.6e-15 85.1 49 75.5
FAN26G0941 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.6e-15 85.1 49 75.5
FAN26G2999 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.6e-15 85.1 49 75.5
Os02g0224400 Oryza sativa ssp. japonica HOM05D005623 ORTHO05D007130 2.6e-15 85.1 49 73.5
SGA_v2.0_scaffold10G05202 Striga asiatica HOM05D005623 ORTHO05D007130 3.5e-15 84.7 49 75.5
CARHR237320 Cardamine hirsuta HOM05D005623 ORTHO05D007130 4.5e-15 84.3 49 69.4
DCAR_024065 Daucus carota HOM05D005623 ORTHO05D007130 4.5e-15 84.3 49 73.5
AT4G29490 Arabidopsis thaliana HOM05D005623 ORTHO05D007130 5.9e-15 84.0 49 71.4
RcHm_v2.0_Chr2g0092921 Rosa chinensis HOM05D005623 ORTHO05D007130 5.9e-15 84.0 49 73.5
Lj4g0010059 Lotus japonicus HOM05D005623 ORTHO05D007130 7.7e-15 83.6 49 71.4
FAN23G2436 Fragaria x ananassa HOM05D005623 ORTHO05D007130 1.0e-14 83.2 49 73.5
Sp7g27360 Schrenkiella parvula HOM05D005623 ORTHO05D007130 1.0e-14 83.2 49 69.4
AL7G22900 Arabidopsis lyrata HOM05D005623 ORTHO05D007130 1.3e-14 82.8 49 69.4
Carub.0007s1105 Capsella rubella HOM05D005623 ORTHO05D007130 1.3e-14 82.8 49 69.4
HanXRQChr10g0319101 Helianthus annuus HOM05D005623 ORTHO05D007130 2.9e-14 81.6 49 71.4
Thhalv10025013m.g Eutrema salsugineum HOM05D005623 ORTHO05D007130 3.8e-14 81.3 49 67.3
Nn1g05571 Nelumbo nucifera HOM05D005623 ORTHO05D007130 5.0e-14 80.9 49 69.4
Lsat_1_v5_gn_5_145881 Lactuca sativa HOM05D005623 ORTHO05D007130 6.5e-14 80.5 49 69.4
ClCG03G015820 Citrullus lanatus HOM05D005623 ORTHO05D007130 8.5e-14 80.1 41 80.5
Cc06_g18050 Coffea canephora HOM05D005623 ORTHO05D007130 1.1e-13 79.7 49 67.3
ECA234G3237 Erigeron canadensis HOM05D005623 ORTHO05D007130 1.5e-13 79.3 49 69.4
Sabra06G0118200 Salix brachista HOM05D005623 ORTHO05D007130 3.2e-13 78.2 39 82.1
Pp3c22_16460 Physcomitrium patens HOM05D005623 ORTHO05D007130 5.5e-13 77.4 49 65.3
MD02G1074000 Malus domestica HOM05D005623 ORTHO05D007130 1.2e-12 76.3 44 72.7
AagrBONN_evm.TU.Sc2ySwM_117.2163 Anthoceros agrestis HOM05D005623 ORTHO05D007130 1.6e-12 75.9 49 65.3
FAN28G0299 Fragaria x ananassa HOM05D005623 ORTHO05D007130 2.1e-12 75.5 41 78.0
SMO358G0241 Selaginella moellendorffii HOM05D005623 ORTHO05D007130 5.2e-11 70.9 41 73.2
Mapoly0025s0122 Marchantia polymorpha HOM05D005623 ORTHO05D007130 2.6e-10 68.6 49 63.3
Cre07.g342920 Chlamydomonas reinhardtii HOM05D005623 ORTHO05D007130 2.2e-06 55.5 49 51.0


User provided reference genes

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