Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18872 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 1.7e-70 269.2 138 100.0
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 8.9e-19 97.4 68 82.4
Eucgr.J01747 Eucalyptus grandis HOM05D006555 ORTHO05D008376 4.9e-17 91.7 68 76.5
PSO013G0385 Papaver somniferum HOM05D006555 ORTHO05D008376 8.3e-17 90.9 67 77.6
PSO832G4179 Papaver somniferum HOM05D006555 ORTHO05D008376 8.3e-17 90.9 67 77.6
RhsimUnG0168200 Rhododendron simsii HOM05D006555 ORTHO05D008376 1.1e-16 90.5 62 79.0
Cc07_g02700 Coffea canephora HOM05D006555 ORTHO05D008376 1.4e-16 90.1 62 79.0
ATR0712G064 Amborella trichopoda HOM05D006555 ORTHO05D008376 2.4e-16 89.4 68 76.5
CiPaw.03G033500 Carya illinoinensis HOM05D006555 ORTHO05D008376 2.4e-16 89.4 68 75.0
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 2.4e-16 89.4 86 65.1
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 3.2e-16 89.0 67 77.6
Nitab4.5_0001727g0060 Nicotiana tabacum HOM05D006555 ORTHO05D008376 3.2e-16 89.0 67 76.1
Nitab4.5_0003431g0010 Nicotiana tabacum HOM05D006555 ORTHO05D008376 3.2e-16 89.0 67 76.1
Peaxi162Scf00368g00061 Petunia axillaris HOM05D006555 ORTHO05D008376 3.2e-16 89.0 67 76.1
Atru.chr6.2154 Acer truncatum HOM05D006555 ORTHO05D008376 4.1e-16 88.6 67 76.1
Ah.01g015770 Amaranthus hybridus HOM05D006555 ORTHO05D008376 4.1e-16 88.6 67 76.1
Oeu060599.1 Olea europaea HOM05D006555 ORTHO05D008376 4.1e-16 88.6 67 76.1
PGR142G2543 Punica granatum HOM05D006555 ORTHO05D008376 4.1e-16 88.6 67 76.1
BcaB06g27415 Brassica carinata HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
A04p12870 Brassica napus HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
C04p46570 Brassica napus HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
BolC4t26243H Brassica oleracea HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
BraA04t16950Z Brassica rapa HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
CARHR102570 Cardamine hirsuta HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
Cfa007479 Carpinus fangiana HOM05D006555 ORTHO05D008376 5.4e-16 88.2 67 76.1
Haze_14619 Corylus avellana HOM05D006555 ORTHO05D008376 5.4e-16 88.2 67 76.1
Thhalv10027647m.g Eutrema salsugineum HOM05D006555 ORTHO05D008376 5.4e-16 88.2 68 75.0
Pp3c6_16280 Physcomitrium patens HOM05D006555 ORTHO05D008376 5.4e-16 88.2 89 61.8
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 5.4e-16 88.2 62 77.4
TAR629G0910 Trochodendron aralioides HOM05D006555 ORTHO05D008376 5.4e-16 88.2 67 76.1
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 7.0e-16 87.8 67 76.1
FAN05G5565 Fragaria x ananassa HOM05D006555 ORTHO05D008376 7.0e-16 87.8 68 75.0
Gohir.A07G217400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 7.0e-16 87.8 67 74.6
THA.LOC104800651 Tarenaya hassleriana HOM05D006555 ORTHO05D008376 7.0e-16 87.8 68 75.0
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 9.2e-16 87.4 86 62.8
Hma1.2p1_0697F.1_g205130 Hydrangea macrophylla HOM05D006555 ORTHO05D008376 9.2e-16 87.4 86 65.1
Lj7P407T43 Lonicera japonica HOM05D006555 ORTHO05D008376 9.2e-16 87.4 67 74.6
Actinidia36057 Actinidia chinensis HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 74.6
AL3G42250 Arabidopsis lyrata HOM05D006555 ORTHO05D008376 1.2e-15 87.0 68 73.5
AT2G04620 Arabidopsis thaliana HOM05D006555 ORTHO05D008376 1.2e-15 87.0 68 73.5
CANSAT25G1964 Cannabis sativa HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 74.6
DCAR_011190 Daucus carota HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 73.1
QL02p078549 Quercus lobata HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 74.6
Solyc02g067620.3 Solanum lycopersicum HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 76.1
Sopen02g016730 Solanum pennellii HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 76.1
PGSC0003DMG400006943 Solanum tuberosum HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 76.1
SGA_v2.0_scaffold135G34829 Striga asiatica HOM05D006555 ORTHO05D008376 1.2e-15 87.0 67 74.6
MSTRG.3197 Avicennia marina HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
CAN.G983.4 Capsicum annuum HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
AUR62005932 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
AUR62005935 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
AUR62028128 Chenopodium quinoa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
ClCG10G014600 Citrullus lanatus HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
Ciclev10014254m.g Citrus clementina HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
COL.COLO4_34871 Corchorus olitorius HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
MELO3C009917.2 Cucumis melo HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
CsaV3_3G041990 Cucumis sativus L. HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
Dinv35011 Davidia involucrata HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
FvH4_6g49950 Fragaria vesca HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
FAN02G0929 Fragaria x ananassa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
FAN09G1885 Fragaria x ananassa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
FAN14G1052 Fragaria x ananassa HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 73.5
MD17G1042100 Malus domestica HOM05D006555 ORTHO05D008376 1.6e-15 86.7 68 72.1
Nn4g22926 Nelumbo nucifera HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
Sed0024496 Sechium edule HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 73.1
TAR371G0356 Trochodendron aralioides HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
GSVIVG01032551001 Vitis vinifera HOM05D006555 ORTHO05D008376 1.6e-15 86.7 67 74.6
Migut.H00171 Erythranthe guttata HOM05D006555 ORTHO05D008376 2.0e-15 86.3 67 74.6
Gohir.D07G224400 Gossypium hirsutum HOM05D006555 ORTHO05D008376 2.0e-15 86.3 67 73.1
Gorai.001G258800 Gossypium raimondii HOM05D006555 ORTHO05D008376 2.0e-15 86.3 67 73.1
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 2.0e-15 86.3 68 69.1
Prupe.3G277100 Prunus persica HOM05D006555 ORTHO05D008376 2.0e-15 86.3 68 73.5
SalBow1G4248 Salvia bowleyana HOM05D006555 ORTHO05D008376 2.0e-15 86.3 67 74.6
Thecc.04G067100 Theobroma cacao HOM05D006555 ORTHO05D008376 2.0e-15 86.3 67 73.1
Aa31LG9G1580 Aethionema arabicum HOM05D006555 ORTHO05D008376 2.7e-15 85.9 68 73.5
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 2.7e-15 85.9 68 70.6
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 2.7e-15 85.9 62 75.8
RcHm_v2.0_Chr2g0170121 Rosa chinensis HOM05D006555 ORTHO05D008376 2.7e-15 85.9 68 72.1
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 2.7e-15 85.9 67 74.6
Sp7g02000 Schrenkiella parvula HOM05D006555 ORTHO05D008376 2.7e-15 85.9 68 73.5
Duzib147G0944 Durio zibethinus HOM05D006555 ORTHO05D008376 3.5e-15 85.5 67 71.6
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 3.5e-15 85.5 67 74.6
HPP92_002811 Vanilla planifolia HOM05D006555 ORTHO05D008376 3.5e-15 85.5 67 71.6
HPP92_002867 Vanilla planifolia HOM05D006555 ORTHO05D008376 3.5e-15 85.5 67 71.6
Aqoxy3G03121 Aquilegia oxysepala HOM05D006555 ORTHO05D008376 4.6e-15 85.1 67 73.1
CDE04G3747 Ceratophyllum demersum HOM05D006555 ORTHO05D008376 6.0e-15 84.7 90 60.0
Lalb_Chr04g0258611 Lupinus albus HOM05D006555 ORTHO05D008376 6.0e-15 84.7 68 70.6
Sed0015102 Sechium edule HOM05D006555 ORTHO05D008376 6.0e-15 84.7 62 72.6
CDE06G1454 Ceratophyllum demersum HOM05D006555 ORTHO05D008376 7.8e-15 84.3 90 60.0
Ca_19526_v3 Cicer arietinum L. HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
Medtr6g463330 Medicago truncatula HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
Psat1g109920 Pisum sativum HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
TPR.G27718 Trifolium pratense HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 1.0e-14 84.0 68 70.6
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.3e-14 83.6 68 67.6
Phvul.002G176300 Phaseolus vulgaris HOM05D006555 ORTHO05D008376 1.7e-14 83.2 86 62.8
Zm00001eb179160 Zea mays HOM05D006555 ORTHO05D008376 1.7e-14 83.2 67 70.1
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 2.3e-14 82.8 68 67.6
Zm00001eb041980 Zea mays HOM05D006555 ORTHO05D008376 2.3e-14 82.8 67 70.1
arahy.Tifrunner.gnm1.ann1.LDE0EK Arachis hypogaea HOM05D006555 ORTHO05D008376 3.0e-14 82.4 68 70.6
Lj2g0012787 Lotus japonicus HOM05D006555 ORTHO05D008376 3.0e-14 82.4 68 69.1
Actinidia06047 Actinidia chinensis HOM05D006555 ORTHO05D008376 8.6e-14 80.9 69 69.6
SMO141G0163 Selaginella moellendorffii HOM05D006555 ORTHO05D008376 8.6e-14 80.9 63 71.4
unitig_746.g26576 Utricularia gibba HOM05D006555 ORTHO05D008376 5.6e-13 78.2 67 64.2
Actinidia02796 Actinidia chinensis HOM05D006555 ORTHO05D008376 1.4e-08 63.5 47 72.3


User provided reference genes

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