Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18844 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 1.5e-55 219.2 103 100.0
SEGI_18352 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 4.0e-24 114.8 59 86.4
SEGI_11247 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 1.5e-23 112.8 59 88.1
SEGI_29074 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 9.9e-23 110.2 58 87.9
SEGI_30741 Sequoiadendron giganteum HOM05D005538 ORTHO05D012435 9.9e-23 110.2 58 87.9
SalBow2G1516 Salvia bowleyana HOM05D005538 ORTHO05D007055 8.4e-14 80.5 59 57.6
Peaxi162Scf00220g00119 Petunia axillaris HOM05D005538 ORTHO05D007055 3.2e-13 78.6 61 55.7
CDE05G2048 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 9.3e-13 77.0 59 55.9
Cc11_g17450 Coffea canephora HOM05D005538 ORTHO05D007055 1.6e-12 76.3 64 53.1
Duzib052G1117 Durio zibethinus HOM05D005538 ORTHO05D007055 2.7e-12 75.5 49 63.3
CDE05G1586 Ceratophyllum demersum HOM05D005538 ORTHO05D007055 4.6e-12 74.7 59 54.2
MBI07_g37483_MAGBIO Magnolia biondii HOM05D005538 ORTHO05D007055 6.0e-12 74.3 58 55.2
CANSAT56G2313 Cannabis sativa HOM05D005538 ORTHO05D007055 7.8e-12 73.9 54 53.7
FAN12G2387 Fragaria x ananassa HOM05D005538 ORTHO05D007055 7.8e-12 73.9 71 49.3
PGSC0003DMG400030010 Solanum tuberosum HOM05D005538 ORTHO05D007055 7.8e-12 73.9 64 53.1
FAN07G2678 Fragaria x ananassa HOM05D005538 ORTHO05D007055 1.0e-11 73.6 49 61.2
Solyc01g009780.3 Solanum lycopersicum HOM05D005538 ORTHO05D007055 1.0e-11 73.6 64 51.6
Sopen01g005330 Solanum pennellii HOM05D005538 ORTHO05D007055 1.0e-11 73.6 64 51.6
Actinidia30605 Actinidia chinensis HOM05D005538 ORTHO05D007055 1.3e-11 73.2 61 55.7
FvH4_4g23080 Fragaria vesca HOM05D005538 ORTHO05D007055 1.3e-11 73.2 50 60.0
Nn3g16327 Nelumbo nucifera HOM05D005538 ORTHO05D007055 2.3e-11 72.4 58 55.2
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 2.3e-11 72.4 65 49.2
SalBow8G4168 Salvia bowleyana HOM05D005538 ORTHO05D007055 2.3e-11 72.4 57 54.4
unitig_8.g3121 Utricularia gibba HOM05D005538 ORTHO05D007055 2.3e-11 72.4 63 52.4
Glyma.08G360100 Glycine max HOM05D005538 ORTHO05D007055 3.0e-11 72.0 72 45.8
Gohir.A12G140500 Gossypium hirsutum HOM05D005538 ORTHO05D007055 3.0e-11 72.0 49 61.2
Gohir.D12G145100 Gossypium hirsutum HOM05D005538 ORTHO05D007055 3.0e-11 72.0 49 61.2
Gorai.008G156500 Gossypium raimondii HOM05D005538 ORTHO05D007055 3.0e-11 72.0 49 61.2
SEGI_11753 Sequoiadendron giganteum HOM05D005538 ORTHO05D007055 3.0e-11 72.0 40 82.5
ATR0582G064 Amborella trichopoda HOM05D005538 ORTHO05D007055 3.9e-11 71.6 61 49.2
Hma1.2p1_0459F.1_g157240 Hydrangea macrophylla HOM05D005538 ORTHO05D007055 3.9e-11 71.6 62 51.6
vmacro22631 Vaccinium macrocarpon HOM05D005538 ORTHO05D007055 3.9e-11 71.6 49 59.2
CsaV3_6G007860 Cucumis sativus L. HOM05D005538 ORTHO05D007055 5.1e-11 71.2 49 63.3
FAN17G2587 Fragaria x ananassa HOM05D005538 ORTHO05D007055 5.1e-11 71.2 49 59.2
HanXRQChr06g0175181 Helianthus annuus HOM05D005538 ORTHO05D007055 5.1e-11 71.2 59 52.5
CAN.G1277.4 Capsicum annuum HOM05D005538 ORTHO05D007055 6.6e-11 70.9 49 59.2
Oeu003281.1 Olea europaea HOM05D005538 ORTHO05D007055 6.6e-11 70.9 58 51.7
Duzib248G0674 Durio zibethinus HOM05D005538 ORTHO05D007055 8.7e-11 70.5 49 59.2
Thecc.02G196400 Theobroma cacao HOM05D005538 ORTHO05D007055 8.7e-11 70.5 49 59.2
Actinidia22132 Actinidia chinensis HOM05D005538 ORTHO05D007055 1.1e-10 70.1 61 52.5
COL.COLO4_34942 Corchorus olitorius HOM05D005538 ORTHO05D007055 1.1e-10 70.1 49 59.2
MELO3C022346.2 Cucumis melo HOM05D005538 ORTHO05D007055 1.1e-10 70.1 49 61.2
Dinv06880 Davidia involucrata HOM05D005538 ORTHO05D007055 1.1e-10 70.1 64 51.6
QL03p050357 Quercus lobata HOM05D005538 ORTHO05D007055 1.1e-10 70.1 49 59.2
Haze_12470 Corylus avellana HOM05D005538 ORTHO05D007055 1.9e-10 69.3 49 57.1
Manes.08G103200 Manihot esculenta HOM05D005538 ORTHO05D007055 1.9e-10 69.3 49 59.2
THA.LOC104825475 Tarenaya hassleriana HOM05D005538 ORTHO05D007055 1.9e-10 69.3 49 57.1
GSVIVG01000954001 Vitis vinifera HOM05D005538 ORTHO05D007055 1.9e-10 69.3 61 47.5
ECA246G0794 Erigeron canadensis HOM05D005538 ORTHO05D007055 2.5e-10 68.9 49 59.2
Migut.K01033 Erythranthe guttata HOM05D005538 ORTHO05D007055 2.5e-10 68.9 62 50.0
Cfa009412 Carpinus fangiana HOM05D005538 ORTHO05D007055 3.3e-10 68.6 49 55.1
Glyma.18G301900 Glycine max HOM05D005538 ORTHO05D007055 3.3e-10 68.6 59 49.2
PSO017G1114 Papaver somniferum HOM05D005538 ORTHO05D007055 3.3e-10 68.6 54 51.9
PSO478G3672 Papaver somniferum HOM05D005538 ORTHO05D007055 3.3e-10 68.6 54 51.9
TAR371G0765 Trochodendron aralioides HOM05D005538 ORTHO05D007055 3.3e-10 68.6 64 48.4
Aa31LG3G14470 Aethionema arabicum HOM05D005538 ORTHO05D007055 4.3e-10 68.2 49 59.2
BcaNung01169 Brassica carinata HOM05D005538 ORTHO05D007055 4.3e-10 68.2 49 59.2
C02p05970 Brassica napus HOM05D005538 ORTHO05D007055 4.3e-10 68.2 49 59.2
BolC2t06540H Brassica oleracea HOM05D005538 ORTHO05D007055 4.3e-10 68.2 49 59.2
SGA_v2.0_scaffold80G25945 Striga asiatica HOM05D005538 ORTHO05D007055 4.3e-10 68.2 58 51.7
Eucgr.B03544 Eucalyptus grandis HOM05D005538 ORTHO05D007055 5.6e-10 67.8 49 55.1
Sc04g0010460 Simmondsia chinensis HOM05D005538 ORTHO05D007055 5.6e-10 67.8 60 50.0
Lj3A1076T34 Lonicera japonica HOM05D005538 ORTHO05D007055 7.3e-10 67.4 49 57.1
MD13G1126300 Malus domestica HOM05D005538 ORTHO05D007055 7.3e-10 67.4 49 51.0
Manes.09G185800 Manihot esculenta HOM05D005538 ORTHO05D007055 7.3e-10 67.4 49 57.1
RcHm_v2.0_Chr4g0429351 Rosa chinensis HOM05D005538 ORTHO05D007055 7.3e-10 67.4 73 43.8
Sp6g30790 Schrenkiella parvula HOM05D005538 ORTHO05D007055 7.3e-10 67.4 49 59.2
VMungo1383G2546 Vigna mungo HOM05D005538 ORTHO05D007055 7.3e-10 67.4 64 45.3
AT5G13190 Arabidopsis thaliana HOM05D005538 ORTHO05D007055 9.6e-10 67.0 49 57.1
Carub.0006s1136 Capsella rubella HOM05D005538 ORTHO05D007055 9.6e-10 67.0 49 57.1
Prupe.1G219100 Prunus persica HOM05D005538 ORTHO05D007055 9.6e-10 67.0 49 55.1
TAR622G0886 Trochodendron aralioides HOM05D005538 ORTHO05D007055 9.6e-10 67.0 62 48.4
AL6G23800 Arabidopsis lyrata HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 57.1
A02p01730 Brassica napus HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 57.1
BraA02t05152Z Brassica rapa HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 57.1
CiPaw.05G104000 Carya illinoinensis HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 51.0
Sabra03G0121100 Salix brachista HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 57.1
TWI18G0823 Tripterygium wilfordii HOM05D005538 ORTHO05D007055 1.3e-09 66.6 49 53.1
MSTRG.469 Avicennia marina HOM05D005538 ORTHO05D007055 1.6e-09 66.2 49 55.1
CiPaw.06G107500 Carya illinoinensis HOM05D005538 ORTHO05D007055 1.6e-09 66.2 49 53.1
Thhalv10014995m.g Eutrema salsugineum HOM05D005538 ORTHO05D007055 1.6e-09 66.2 49 57.1
MD16G1126800 Malus domestica HOM05D005538 ORTHO05D007055 1.6e-09 66.2 49 55.1
Pp3c26_1170 Physcomitrium patens HOM05D005538 ORTHO05D007055 1.6e-09 66.2 58 55.2
Potri.001G061900 Populus trichocarpa HOM05D005538 ORTHO05D007055 1.6e-09 66.2 49 57.1
A10p25020 Brassica napus HOM05D005538 ORTHO05D007055 2.1e-09 65.9 49 59.2
HanXRQChr17g0540491 Helianthus annuus HOM05D005538 ORTHO05D007055 2.1e-09 65.9 49 57.1
Potri.003G165900 Populus trichocarpa HOM05D005538 ORTHO05D007055 2.1e-09 65.9 49 57.1
Hund28220 Selenicereus undatus HOM05D005538 ORTHO05D007055 2.1e-09 65.9 49 55.1
Hund28225 Selenicereus undatus HOM05D005538 ORTHO05D007055 2.1e-09 65.9 49 55.1
Medtr7g005440 Medicago truncatula HOM05D005538 ORTHO05D007055 2.8e-09 65.5 60 50.0
Hund25495 Selenicereus undatus HOM05D005538 ORTHO05D007055 2.8e-09 65.5 49 55.1
Aqoxy3G01758 Aquilegia oxysepala HOM05D005538 ORTHO05D007055 3.6e-09 65.1 48 54.2
Phvul.008G000500 Phaseolus vulgaris HOM05D005538 ORTHO05D007055 3.6e-09 65.1 60 46.7
C09p63880 Brassica napus HOM05D005538 ORTHO05D007055 4.8e-09 64.7 49 57.1
BolC9t59228H Brassica oleracea HOM05D005538 ORTHO05D007055 4.8e-09 64.7 49 57.1
Ca_06515_v3 Cicer arietinum L. HOM05D005538 ORTHO05D007055 6.2e-09 64.3 60 48.3
Gohir.A03G151200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 6.2e-09 64.3 48 56.2
Gohir.D02G174200 Gossypium hirsutum HOM05D005538 ORTHO05D007055 6.2e-09 64.3 48 56.2
Gorai.005G195900 Gossypium raimondii HOM05D005538 ORTHO05D007055 6.2e-09 64.3 48 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1139 Anthoceros agrestis HOM05D005538 ORTHO05D007055 8.1e-09 63.9 62 50.0
BraA10t44563Z Brassica rapa HOM05D005538 ORTHO05D007055 1.1e-08 63.5 49 57.1
Ciclev10033047m.g Citrus clementina HOM05D005538 ORTHO05D007055 1.1e-08 63.5 49 55.1
TAR629G0377 Trochodendron aralioides HOM05D005538 ORTHO05D007055 1.4e-08 63.2 57 49.1
DCAR_028448 Daucus carota HOM05D005538 ORTHO05D007055 1.8e-08 62.8 40 65.0
CSS0040217 Camellia sinensis var. sinensis HOM05D005538 ORTHO05D007055 3.1e-08 62.0 60 46.7
Psat3g208320 Pisum sativum HOM05D005538 ORTHO05D007055 3.1e-08 62.0 60 45.0
ClCG06G001820 Citrullus lanatus HOM05D005538 ORTHO05D007055 4.0e-08 61.6 48 54.2
Sed0021477 Sechium edule HOM05D005538 ORTHO05D007055 4.0e-08 61.6 48 54.2
TPR.G15629 Trifolium pratense HOM05D005538 ORTHO05D007055 5.3e-08 61.2 57 47.4
AagrBONN_evm.TU.Sc2ySwM_117.1282 Anthoceros agrestis HOM05D005538 ORTHO05D007055 6.9e-08 60.8 49 49.0
EL10Ac6g13582 Beta vulgaris HOM05D005538 ORTHO05D007055 6.9e-08 60.8 60 45.0
SMO271G0002 Selaginella moellendorffii HOM05D005538 ORTHO05D007055 1.2e-07 60.1 61 50.8
Ah.03g135760 Amaranthus hybridus HOM05D005538 ORTHO05D007055 1.5e-07 59.7 60 45.0
Gohir.D01G019700 Gossypium hirsutum HOM05D005538 ORTHO05D007055 4.5e-07 58.2 63 44.4
Gorai.002G022100 Gossypium raimondii HOM05D005538 ORTHO05D007055 4.5e-07 58.2 63 44.4
Gohir.A01G021300 Gossypium hirsutum HOM05D005538 ORTHO05D007055 5.8e-07 57.8 63 44.4
CBR_g4442 Chara braunii HOM05D005538 ORTHO05D007055 9.9e-07 57.0 49 51.0
Os02g0515600 Oryza sativa ssp. japonica HOM05D005538 ORTHO05D007055 9.9e-07 57.0 55 43.6
CARHR200280 Cardamine hirsuta HOM05D005538 ORTHO05D007055 1.7e-06 56.2 44 52.3
TAR623G0421 Trochodendron aralioides HOM05D004785 ORTHO05D005704 2.9e-06 55.5 48 50.0
TAR628G0286 Trochodendron aralioides HOM05D000367 ORTHO05D001438 6.4e-06 54.3 60 43.3


User provided reference genes

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