Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18843 Sequoiadendron giganteum HOM05D001448 ORTHO05D386067 2.9e-165 585.1 284 100.0
Thecc.01G301600 Theobroma cacao HOM05D001448 ORTHO05D007650 3.3e-28 129.8 87 67.8
Actinidia21205 Actinidia chinensis HOM05D001448 ORTHO05D007650 2.8e-27 126.7 87 67.8
TWI59G1163 Tripterygium wilfordii HOM05D001448 ORTHO05D007650 6.3e-27 125.6 87 67.8
Gohir.D11G119100 Gossypium hirsutum HOM05D001448 ORTHO05D007650 1.1e-26 124.8 87 65.5
Gorai.007G127600 Gossypium raimondii HOM05D001448 ORTHO05D007650 1.1e-26 124.8 87 65.5
GSVIVG01028029001 Vitis vinifera HOM05D001448 ORTHO05D007650 1.1e-26 124.8 80 71.2
Nn3g21510 Nelumbo nucifera HOM05D001448 ORTHO05D007650 1.4e-26 124.4 77 74.0
Atru.chr5.1137 Acer truncatum HOM05D001448 ORTHO05D007650 1.8e-26 124.0 87 66.7
Ciclev10019312m.g Citrus clementina HOM05D001448 ORTHO05D007650 4.1e-26 122.9 87 67.8
Dinv19684 Davidia involucrata HOM05D001448 ORTHO05D007650 4.1e-26 122.9 87 65.5
ATR0706G118 Amborella trichopoda HOM05D001448 ORTHO05D007650 5.3e-26 122.5 87 65.5
CSS0005794 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D007650 6.9e-26 122.1 87 67.8
Haze_04948 Corylus avellana HOM05D001448 ORTHO05D007650 6.9e-26 122.1 87 66.7
Sc18g0004000 Simmondsia chinensis HOM05D001448 ORTHO05D007650 9.0e-26 121.7 77 71.4
Hma1.2p1_0491F.1_g164660 Hydrangea macrophylla HOM05D001448 ORTHO05D007650 1.5e-25 120.9 77 72.7
vmacro02445 Vaccinium macrocarpon HOM05D001448 ORTHO05D007650 1.5e-25 120.9 87 64.4
AUR62025568 Chenopodium quinoa HOM05D001448 ORTHO05D007650 2.6e-25 120.2 80 66.2
TAR636G0525 Trochodendron aralioides HOM05D001448 ORTHO05D007650 3.4e-25 119.8 87 65.5
AUR62008678 Chenopodium quinoa HOM05D001448 ORTHO05D007650 4.5e-25 119.4 80 66.2
Sabra14G0095100 Salix brachista HOM05D001448 ORTHO05D007650 4.5e-25 119.4 87 64.4
TAR636G2196 Trochodendron aralioides HOM05D001448 ORTHO05D007650 4.5e-25 119.4 123 54.5
CiPaw.07G110000 Carya illinoinensis HOM05D001448 ORTHO05D007650 5.9e-25 119.0 84 65.5
Ca_10328_v3 Cicer arietinum L. HOM05D001448 ORTHO05D007650 7.7e-25 118.6 80 66.2
Potri.014G128200 Populus trichocarpa HOM05D001448 ORTHO05D007650 7.7e-25 118.6 89 62.9
Rhsim13G0009500 Rhododendron simsii HOM05D001448 ORTHO05D007650 7.7e-25 118.6 86 66.3
Aa31LG5G2030 Aethionema arabicum HOM05D001448 ORTHO05D007650 1.0e-24 118.2 124 52.4
TPR.G34005 Trifolium pratense HOM05D001448 ORTHO05D007650 1.0e-24 118.2 80 66.2
Pp3c22_13240 Physcomitrium patens HOM05D001448 ORTHO05D007650 1.3e-24 117.9 129 48.8
arahy.Tifrunner.gnm1.ann1.1TW9IR Arachis hypogaea HOM05D001448 ORTHO05D007650 1.7e-24 117.5 80 66.2
arahy.Tifrunner.gnm1.ann1.US6JKM Arachis hypogaea HOM05D001448 ORTHO05D007650 1.7e-24 117.5 80 66.2
Psat6g164760 Pisum sativum HOM05D001448 ORTHO05D007650 1.7e-24 117.5 80 65.0
ClCG09G005630 Citrullus lanatus HOM05D001448 ORTHO05D007650 2.2e-24 117.1 80 68.8
Cpa.g.sc9.254 Carica papaya HOM05D001448 ORTHO05D007650 2.9e-24 116.7 87 63.2
Eucgr.H01106 Eucalyptus grandis HOM05D001448 ORTHO05D007650 2.9e-24 116.7 87 63.2
FAN20G2072 Fragaria x ananassa HOM05D001448 ORTHO05D007650 3.8e-24 116.3 77 68.8
THA.LOC104801277 Tarenaya hassleriana HOM05D001448 ORTHO05D007650 3.8e-24 116.3 124 50.8
CDE02G4502 Ceratophyllum demersum HOM05D001448 ORTHO05D007650 5.0e-24 115.9 80 66.2
CsaV3_7G029320 Cucumis sativus L. HOM05D001448 ORTHO05D007650 5.0e-24 115.9 80 67.5
MD03G1289600 Malus domestica HOM05D001448 ORTHO05D007650 5.0e-24 115.9 77 70.1
Oeu046674.1 Olea europaea HOM05D001448 ORTHO05D007650 5.0e-24 115.9 77 74.0
QL12p028362 Quercus lobata HOM05D001448 ORTHO05D007650 5.0e-24 115.9 87 63.2
AT4G02390 Arabidopsis thaliana HOM05D001448 ORTHO05D007650 6.5e-24 115.5 124 51.6
Cc01_g20930 Coffea canephora HOM05D001448 ORTHO05D007650 6.5e-24 115.5 75 69.3
DCAR_012388 Daucus carota HOM05D001448 ORTHO05D007650 6.5e-24 115.5 87 62.1
MBI18_g45178_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D007650 6.5e-24 115.5 80 67.5
EL10Ac7g17524 Beta vulgaris HOM05D001448 ORTHO05D007650 8.5e-24 115.2 80 63.8
AL6G50730 Arabidopsis lyrata HOM05D001448 ORTHO05D007650 1.1e-23 114.8 124 51.6
FvH4_2g25840 Fragaria vesca HOM05D001448 ORTHO05D007650 1.1e-23 114.8 77 68.8
FAN15G1191 Fragaria x ananassa HOM05D001448 ORTHO05D007650 1.1e-23 114.8 77 68.8
FAN24G0272 Fragaria x ananassa HOM05D001448 ORTHO05D007650 1.1e-23 114.8 77 68.8
FAN27G0114 Fragaria x ananassa HOM05D001448 ORTHO05D007650 1.1e-23 114.8 77 68.8
Sed0003234 Sechium edule HOM05D001448 ORTHO05D007650 1.9e-23 114.0 80 66.2
Hund05432 Selenicereus undatus HOM05D001448 ORTHO05D007650 1.9e-23 114.0 86 60.5
Lj5g0009959 Lotus japonicus HOM05D001448 ORTHO05D007650 2.5e-23 113.6 79 65.8
Medtr1g088375 Medicago truncatula HOM05D001448 ORTHO05D007650 4.2e-23 112.8 80 63.8
Os01g0351200 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D007650 4.2e-23 112.8 121 51.2
PGR119G0994 Punica granatum HOM05D001448 ORTHO05D007650 4.2e-23 112.8 80 63.8
Sp6g02270 Schrenkiella parvula HOM05D001448 ORTHO05D007650 5.5e-23 112.5 87 60.9
BolC2t09904H Brassica oleracea HOM05D001448 ORTHO05D007650 7.2e-23 112.1 129 47.3
Carub.0006s3477 Capsella rubella HOM05D001448 ORTHO05D007650 7.2e-23 112.1 87 60.9
Glyma.02G017200 Glycine max HOM05D001448 ORTHO05D007650 7.2e-23 112.1 72 70.8
Nitab4.5_0001639g0080 Nicotiana tabacum HOM05D001448 ORTHO05D007650 9.4e-23 111.7 121 48.8
BcaC01g06762 Brassica carinata HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 60.9
A03p31090 Brassica napus HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 60.9
C03p37900 Brassica napus HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 60.9
BolC3t16078H Brassica oleracea HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 60.9
BraA03t12286Z Brassica rapa HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 60.9
CARHR250580 Cardamine hirsuta HOM05D001448 ORTHO05D007650 1.2e-22 111.3 87 59.8
Lalb_Chr06g0166511 Lupinus albus HOM05D001448 ORTHO05D007650 1.2e-22 111.3 72 70.8
PSO170G4471 Papaver somniferum HOM05D001448 ORTHO05D007650 1.2e-22 111.3 79 67.1
BcaB01g02445 Brassica carinata HOM05D001448 ORTHO05D007650 1.6e-22 110.9 87 60.9
A02p24650 Brassica napus HOM05D001448 ORTHO05D007650 1.6e-22 110.9 87 59.8
Thhalv10028509m.g Eutrema salsugineum HOM05D001448 ORTHO05D007650 1.6e-22 110.9 87 59.8
HanXRQChr01g0001321 Helianthus annuus HOM05D001448 ORTHO05D007650 1.6e-22 110.9 84 61.9
Prupe.8G262600 Prunus persica HOM05D001448 ORTHO05D007650 1.6e-22 110.9 77 68.8
Solyc08g074740.3 Solanum lycopersicum HOM05D001448 ORTHO05D007650 1.6e-22 110.9 153 44.4
C02p38910 Brassica napus HOM05D001448 ORTHO05D007650 2.1e-22 110.5 87 59.8
Lsat_1_v5_gn_5_190980 Lactuca sativa HOM05D001448 ORTHO05D007650 2.1e-22 110.5 86 64.0
RcHm_v2.0_Chr6g0294171 Rosa chinensis HOM05D001448 ORTHO05D007650 2.1e-22 110.5 77 67.5
Sopen08g023340 Solanum pennellii HOM05D001448 ORTHO05D007650 2.1e-22 110.5 115 48.7
BraA02t07456Z Brassica rapa HOM05D001448 ORTHO05D007650 3.6e-22 109.8 129 46.5
Manes.01G220100 Manihot esculenta HOM05D001448 ORTHO05D007650 4.6e-22 109.4 87 60.9
Phvul.007G218800 Phaseolus vulgaris HOM05D001448 ORTHO05D007650 4.6e-22 109.4 72 70.8
CAN.G1214.7 Capsicum annuum HOM05D001448 ORTHO05D007650 6.1e-22 109.0 115 47.8
Glyma.10G017700 Glycine max HOM05D001448 ORTHO05D007650 6.1e-22 109.0 72 69.4
ECA248G3972 Erigeron canadensis HOM05D001448 ORTHO05D007650 1.8e-21 107.5 84 61.9
Manes.01G220000 Manihot esculenta HOM05D001448 ORTHO05D007650 1.8e-21 107.5 80 62.5
BcaC03g16118 Brassica carinata HOM05D001448 ORTHO05D007650 2.3e-21 107.1 87 58.6
Nitab4.5_0000183g0110 Nicotiana tabacum HOM05D001448 ORTHO05D007650 2.3e-21 107.1 83 59.0
Sed0021740 Sechium edule HOM05D001448 ORTHO05D007650 2.3e-21 107.1 80 63.8
Potri.014G128000 Populus trichocarpa HOM05D001448 ORTHO05D007650 6.7e-21 105.5 121 48.8
HPP92_018257 Vanilla planifolia HOM05D001448 ORTHO05D007650 6.7e-21 105.5 87 57.5
PGSC0003DMG401030070 Solanum tuberosum HOM05D001448 ORTHO05D007650 8.8e-21 105.1 86 55.8
Migut.D00147 Erythranthe guttata HOM05D001448 ORTHO05D007650 2.0e-20 104.0 80 63.8
Os01g0351100 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D007650 2.0e-20 104.0 121 47.9
SGA_v2.0_scaffold1G00360 Striga asiatica HOM05D001448 ORTHO05D007650 3.3e-20 103.2 98 54.1
MD03G1289400 Malus domestica HOM05D001448 ORTHO05D007650 7.4e-20 102.1 77 63.6
SalBow3G2153 Salvia bowleyana HOM05D001448 ORTHO05D007650 7.4e-20 102.1 80 61.2
Medtr1g088400 Medicago truncatula HOM05D001448 ORTHO05D007650 1.3e-19 101.3 80 57.5
TWI59G0775 Tripterygium wilfordii HOM05D001448 ORTHO05D007650 1.7e-19 100.9 87 54.0
Mapoly0074s0022 Marchantia polymorpha HOM05D001448 ORTHO05D007650 1.1e-18 98.2 124 46.0
Solyc08g074730.2 Solanum lycopersicum HOM05D001448 ORTHO05D007650 2.4e-18 97.1 112 43.8
Lj1C23T18 Lonicera japonica HOM05D001448 ORTHO05D007650 5.3e-18 95.9 124 46.0
PGSC0003DMG402030070 Solanum tuberosum HOM05D001448 ORTHO05D007650 5.3e-18 95.9 86 51.2
PSO017G0901 Papaver somniferum HOM05D001448 ORTHO05D007650 1.2e-17 94.7 103 47.6
SMO353G0427 Selaginella moellendorffii HOM05D001448 ORTHO05D007650 7.7e-17 92.0 86 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1274 Anthoceros agrestis HOM05D001448 ORTHO05D007650 5.0e-16 89.4 74 59.5
Zm00001eb341090 Zea mays HOM05D001448 ORTHO05D007650 1.9e-15 87.4 66 59.1
Gohir.A11G114000 Gossypium hirsutum HOM05D001448 ORTHO05D007650 2.5e-15 87.0 113 45.1
Peaxi162Scf00445g00511 Petunia axillaris HOM05D001448 ORTHO05D007650 1.2e-14 84.7 148 37.2
SMO364G0756 Selaginella moellendorffii HOM05D001448 ORTHO05D007650 3.6e-14 83.2 77 51.9
MD03G1289500 Malus domestica HOM05D001448 ORTHO05D007650 4.7e-14 82.8 61 63.9
VMungo0720G1165 Vigna mungo HOM05D001448 ORTHO05D007650 3.0e-13 80.1 72 55.6
MELO3C015996.2 Cucumis melo HOM05D001448 ORTHO05D007650 1.1e-07 61.6 53 52.8
Pp3c8_17220 Physcomitrium patens HOM05D001448 ORTHO05D005781 1.5e-07 61.2 89 38.2
Dinv22438 Davidia involucrata HOM05D001448 ORTHO05D005781 2.1e-06 57.4 79 40.5
Nn1g02698 Nelumbo nucifera HOM05D001448 ORTHO05D005781 2.7e-06 57.0 79 40.5
SEGI_37107 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 2.7e-06 57.0 79 38.0
Ciclev10023303m.g Citrus clementina HOM05D001448 ORTHO05D007650 3.6e-06 56.6 40 67.5
Mapoly0154s0015 Marchantia polymorpha HOM05D001448 ORTHO05D005781 3.6e-06 56.6 100 35.0
AUR62011902 Chenopodium quinoa HOM05D001448 ORTHO05D005781 6.1e-06 55.8 79 39.2
Gohir.A11G129132 Gossypium hirsutum HOM05D001448 ORTHO05D005781 6.1e-06 55.8 79 39.2
Gohir.D11G134900 Gossypium hirsutum HOM05D001448 ORTHO05D005781 6.1e-06 55.8 79 39.2
PSO017G5465 Papaver somniferum HOM05D001448 ORTHO05D005781 6.1e-06 55.8 86 37.2
PSO063G1607 Papaver somniferum HOM05D001448 ORTHO05D005781 6.1e-06 55.8 86 37.2


User provided reference genes

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