Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18713 Sequoiadendron giganteum HOM05D005086 ORTHO05D005980 8.3e-51 203.4 100 100.0
SEGI_35480 Sequoiadendron giganteum HOM05D005086 ORTHO05D005980 1.9e-34 149.1 70 100.0
ATR1136G054 Amborella trichopoda HOM05D005086 ORTHO05D005980 2.0e-28 129.0 70 88.6
MBI06_g43016_MAGBIO Magnolia biondii HOM05D005086 ORTHO05D005980 9.9e-28 126.7 71 81.7
MBI06_g46897_MAGBIO Magnolia biondii HOM05D005086 ORTHO05D005980 9.9e-28 126.7 71 81.7
BcaB03g12814 Brassica carinata HOM05D000987 ORTHO05D005980 1.3e-27 126.3 70 82.9
BcaC07g39103 Brassica carinata HOM05D005086 ORTHO05D005980 1.3e-27 126.3 70 82.9
C08p20850 Brassica napus HOM05D005086 ORTHO05D005980 1.3e-27 126.3 70 82.9
BolC8t49724H Brassica oleracea HOM05D005086 ORTHO05D005980 1.3e-27 126.3 70 82.9
BraA08t34827Z Brassica rapa HOM05D005086 ORTHO05D005980 1.3e-27 126.3 70 82.9
MSTRG.25335 Avicennia marina HOM05D005086 ORTHO05D005980 1.7e-27 125.9 70 84.3
A06p17510 Brassica napus HOM05D005086 ORTHO05D005980 1.7e-27 125.9 87 71.3
SGA_v2.0_scaffold24G10385 Striga asiatica HOM05D005086 ORTHO05D005980 1.7e-27 125.9 76 76.3
Thecc.08G143300 Theobroma cacao HOM05D005086 ORTHO05D005980 1.7e-27 125.9 70 84.3
A08p28940 Brassica napus HOM05D005086 ORTHO05D005980 2.2e-27 125.6 70 82.9
PSO541G4886 Papaver somniferum HOM05D005086 ORTHO05D005980 2.2e-27 125.6 70 84.3
Thhalv10007584m.g Eutrema salsugineum HOM05D005086 ORTHO05D005980 2.9e-27 125.2 70 82.9
Gohir.A02G067100 Gossypium hirsutum HOM05D005086 ORTHO05D005980 3.8e-27 124.8 70 82.9
Gorai.005G082700 Gossypium raimondii HOM05D005086 ORTHO05D005980 3.8e-27 124.8 70 82.9
Manes.02G174400 Manihot esculenta HOM05D005086 ORTHO05D005980 3.8e-27 124.8 70 81.4
RcHm_v2.0_Chr1g0331511 Rosa chinensis HOM05D005086 ORTHO05D005980 3.8e-27 124.8 70 81.4
Aa31LG7G5420 Aethionema arabicum HOM05D005086 ORTHO05D005980 4.9e-27 124.4 87 69.0
AL1G34590 Arabidopsis lyrata HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 82.9
AT1G21480 Arabidopsis thaliana HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 82.9
BcaB07g32137 Brassica carinata HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 81.4
Carub.0001s2088 Capsella rubella HOM05D005086 ORTHO05D005980 4.9e-27 124.4 87 70.1
Ciclev10001104m.g Citrus clementina HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 81.4
COL.COLO4_33183 Corchorus olitorius HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 82.9
Duzib093G1227 Durio zibethinus HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 81.4
Duzib116G0169 Durio zibethinus HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 82.9
FAN15G0455 Fragaria x ananassa HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 81.4
FAN20G2551 Fragaria x ananassa HOM05D005086 ORTHO05D005980 4.9e-27 124.4 70 81.4
FvH4_2g14790 Fragaria vesca HOM05D005086 ORTHO05D005980 6.4e-27 124.0 70 80.0
FAN24G0253 Fragaria x ananassa HOM05D006773 ORTHO05D005980 6.4e-27 124.0 70 80.0
Hund26734 Selenicereus undatus HOM05D005086 ORTHO05D005980 6.4e-27 124.0 70 81.4
THA.LOC104812071 Tarenaya hassleriana HOM05D005086 ORTHO05D005980 6.4e-27 124.0 70 81.4
Manes.18G086500 Manihot esculenta HOM05D005086 ORTHO05D005980 8.4e-27 123.6 70 80.0
Prupe.8G017900 Prunus persica HOM05D005086 ORTHO05D005980 8.4e-27 123.6 70 82.9
QL02p025654 Quercus lobata HOM05D005086 ORTHO05D005980 8.4e-27 123.6 70 81.4
Sp1g19010 Schrenkiella parvula HOM05D005086 ORTHO05D005980 8.4e-27 123.6 70 81.4
Ah.05g167500 Amaranthus hybridus HOM05D005086 ORTHO05D005980 1.1e-26 123.2 70 81.4
EL10As10g23958 Beta vulgaris HOM05D005086 ORTHO05D005980 1.1e-26 123.2 70 81.4
BraA06t24847Z Brassica rapa HOM05D005086 ORTHO05D005980 1.1e-26 123.2 87 70.1
Cfa018373 Carpinus fangiana HOM05D005086 ORTHO05D005980 1.1e-26 123.2 70 80.0
Haze_17696 Corylus avellana HOM05D006773 ORTHO05D005980 1.1e-26 123.2 70 80.0
THA.LOC104810043 Tarenaya hassleriana HOM05D005086 ORTHO05D005980 1.1e-26 123.2 87 67.8
BcaC05g26055 Brassica carinata HOM05D005086 ORTHO05D005980 1.4e-26 122.9 70 80.0
C05p20340 Brassica napus HOM05D005086 ORTHO05D005980 1.4e-26 122.9 70 80.0
BolC5t30730H Brassica oleracea HOM05D005086 ORTHO05D005980 1.4e-26 122.9 70 80.0
CARHR021850 Cardamine hirsuta HOM05D005086 ORTHO05D005980 1.4e-26 122.9 70 81.4
Cpa.g.sc49.73 Carica papaya HOM05D005086 ORTHO05D005980 1.4e-26 122.9 70 81.4
SGA_v2.0_scaffold48G17939 Striga asiatica HOM05D005086 ORTHO05D005980 1.4e-26 122.9 71 80.3
CiPaw.16G018300 Carya illinoinensis HOM05D005086 ORTHO05D005980 1.9e-26 122.5 70 77.1
CDE08G1021 Ceratophyllum demersum HOM05D005086 ORTHO05D005980 1.9e-26 122.5 70 78.6
Zm00001eb147610 Zea mays HOM05D005086 ORTHO05D005980 1.9e-26 122.5 70 81.4
DCAR_001547 Daucus carota HOM05D005086 ORTHO05D005980 2.4e-26 122.1 71 80.3
PSO675G6807 Papaver somniferum HOM05D005086 ORTHO05D005980 2.4e-26 122.1 71 80.3
Potri.002G072300 Populus trichocarpa HOM05D005086 ORTHO05D005980 2.4e-26 122.1 70 81.4
SHI09476 Sapria himalayana HOM05D005086 ORTHO05D005980 2.4e-26 122.1 70 78.6
Aqoxy6G00340 Aquilegia oxysepala HOM05D005086 ORTHO05D005980 3.2e-26 121.7 70 81.4
Sabra05G0143000 Salix brachista HOM05D005086 ORTHO05D005980 3.2e-26 121.7 70 80.0
Lsat_1_v5_gn_6_96840 Lactuca sativa HOM05D005086 ORTHO05D005980 4.2e-26 121.3 70 81.4
CSS0007222 Camellia sinensis var. sinensis HOM05D005086 ORTHO05D005980 5.4e-26 120.9 70 80.0
Dinv41130 Davidia involucrata HOM05D005086 ORTHO05D005980 5.4e-26 120.9 70 80.0
HanXRQChr05g0160791 Helianthus annuus HOM05D005086 ORTHO05D005980 5.4e-26 120.9 70 80.0
Sabra02G0056900 Salix brachista HOM05D005086 ORTHO05D005980 5.4e-26 120.9 70 80.0
TWI74G0391 Tripterygium wilfordii HOM05D005086 ORTHO05D005980 5.4e-26 120.9 70 78.6
MD05G1012600 Malus domestica HOM05D005086 ORTHO05D005980 7.1e-26 120.6 69 81.2
CiPaw.15G022200 Carya illinoinensis HOM05D005086 ORTHO05D005980 9.3e-26 120.2 70 77.1
Migut.C01051 Erythranthe guttata HOM05D005086 ORTHO05D005980 9.3e-26 120.2 70 78.6
PGR044G0933 Punica granatum HOM05D005086 ORTHO05D005980 9.3e-26 120.2 70 78.6
RcHm_v2.0_Chr6g0277351 Rosa chinensis HOM05D005086 ORTHO05D005980 9.3e-26 120.2 70 78.6
GSVIVG01010019001 Vitis vinifera HOM05D005086 ORTHO05D005980 1.2e-25 119.8 70 78.6
MSTRG.1377 Avicennia marina HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 78.6
Cc10_g12980 Coffea canephora HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 78.6
PSO675G1430 Papaver somniferum HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 78.6
Rhsim11G0077300 Rhododendron simsii HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 80.0
vmacro00876 Vaccinium macrocarpon HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 80.0
HPP92_013480 Vanilla planifolia HOM05D005086 ORTHO05D005980 1.6e-25 119.4 70 77.1
Hma1.2p1_0107F.1_g051390 Hydrangea macrophylla HOM05D005086 ORTHO05D005980 2.1e-25 119.0 70 77.1
Nn1g06227 Nelumbo nucifera HOM05D005086 ORTHO05D005980 2.1e-25 119.0 70 75.7
SalBow7G2754 Salvia bowleyana HOM05D005086 ORTHO05D005980 2.1e-25 119.0 70 78.6
Sed0020214 Sechium edule HOM05D005086 ORTHO05D005980 2.1e-25 119.0 71 76.1
Atru.chr13.1691 Acer truncatum HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 77.1
Lalb_Chr20g0118701 Lupinus albus HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 77.1
MD10G1012500 Malus domestica HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 80.0
Peaxi162Scf00263g00031 Petunia axillaris HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 77.1
Potri.005G187400 Populus trichocarpa HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 78.6
vmacro00889 Vaccinium macrocarpon HOM05D005086 ORTHO05D005980 2.7e-25 118.6 70 80.0
Lj2g0027047 Lotus japonicus HOM05D005086 ORTHO05D005980 3.5e-25 118.2 70 77.1
Oeu025719.1 Olea europaea HOM05D005086 ORTHO05D005980 3.5e-25 118.2 70 80.0
Psat6g040360 Pisum sativum HOM05D005086 ORTHO05D005980 3.5e-25 118.2 70 77.1
Actinidia15165 Actinidia chinensis HOM05D005086 ORTHO05D005980 4.6e-25 117.9 70 77.1
Actinidia16590 Actinidia chinensis HOM05D005086 ORTHO05D005980 4.6e-25 117.9 70 77.1
CAN.G2.46 Capsicum annuum HOM05D005086 ORTHO05D005980 6.0e-25 117.5 70 77.1
Eucgr.E02380 Eucalyptus grandis HOM05D005086 ORTHO05D005980 6.0e-25 117.5 70 77.1
Sed0007666 Sechium edule HOM05D005086 ORTHO05D005980 6.0e-25 117.5 70 75.7
TAR625G0035 Trochodendron aralioides HOM05D005086 ORTHO05D005980 6.0e-25 117.5 70 77.1
CsaV3_6G031010 Cucumis sativus L. HOM05D005086 ORTHO05D005980 7.8e-25 117.1 70 75.7
Gohir.D02G073300 Gossypium hirsutum HOM05D005086 ORTHO05D005980 7.8e-25 117.1 66 81.8
AUR62027615 Chenopodium quinoa HOM05D005086 ORTHO05D005980 1.0e-24 116.7 70 75.7
Medtr1g029350 Medicago truncatula HOM05D005086 ORTHO05D005980 1.3e-24 116.3 70 75.7
Sopen04g026640 Solanum pennellii HOM05D005086 ORTHO05D005980 1.3e-24 116.3 72 75.0
arahy.Tifrunner.gnm1.ann1.1CL4KB Arachis hypogaea HOM05D005086 ORTHO05D005980 1.7e-24 115.9 87 63.2
arahy.Tifrunner.gnm1.ann1.AQ25H9 Arachis hypogaea HOM05D005086 ORTHO05D005980 1.7e-24 115.9 87 63.2
Ca_12658_v3 Cicer arietinum L. HOM05D005086 ORTHO05D005980 1.7e-24 115.9 70 75.7
Solyc04g064680.4 Solanum lycopersicum HOM05D005086 ORTHO05D005980 1.7e-24 115.9 70 75.7
PGSC0003DMG400024814 Solanum tuberosum HOM05D005086 ORTHO05D005980 1.7e-24 115.9 70 75.7
CANSAT80G0700 Cannabis sativa HOM05D005086 ORTHO05D005980 2.3e-24 115.5 70 75.7
Lj4A690G48 Lonicera japonica HOM05D005086 ORTHO05D005980 3.0e-24 115.2 86 68.6
Oeu046001.1 Olea europaea HOM05D005086 ORTHO05D005980 3.0e-24 115.2 78 69.2
COL.COLO4_26591 Corchorus olitorius HOM05D005086 ORTHO05D005980 3.9e-24 114.8 87 64.4
MELO3C008415.2 Cucumis melo HOM05D005086 ORTHO05D005980 3.9e-24 114.8 70 74.3
Glyma.14G202400 Glycine max HOM05D005086 ORTHO05D005980 5.1e-24 114.4 87 64.4
CSS0017168 Camellia sinensis var. sinensis HOM05D005086 ORTHO05D005980 6.6e-24 114.0 70 72.9
Lj1g0013822 Lotus japonicus HOM05D005086 ORTHO05D005980 6.6e-24 114.0 87 63.2
unitig_82.g27089 Utricularia gibba HOM05D005086 ORTHO05D005980 6.6e-24 114.0 70 72.9
COL.COLO4_09224 Corchorus olitorius HOM05D005086 ORTHO05D005980 8.7e-24 113.6 97 59.8
Nitab4.5_0004095g0020 Nicotiana tabacum HOM05D005086 ORTHO05D005980 1.1e-23 113.2 87 63.2
ClCG08G006410 Citrullus lanatus HOM05D005086 ORTHO05D005980 1.5e-23 112.8 70 72.9
Nitab4.5_0000445g0110 Nicotiana tabacum HOM05D005086 ORTHO05D005980 1.9e-23 112.5 87 63.2
Thecc.08G143500 Theobroma cacao HOM05D005086 ORTHO05D005980 2.5e-23 112.1 87 64.4
AagrBONN_evm.TU.Sc2ySwM_228.5615 Anthoceros agrestis HOM05D005086 ORTHO05D005980 3.3e-23 111.7 71 69.0
Phvul.001G063800 Phaseolus vulgaris HOM05D005086 ORTHO05D005980 4.3e-23 111.3 70 72.9
Sc20g0003350 Simmondsia chinensis HOM05D005086 ORTHO05D005980 4.3e-23 111.3 66 78.8
VMungo0647G0181 Vigna mungo HOM05D005086 ORTHO05D005980 4.3e-23 111.3 87 62.1
Duzib041G0632 Durio zibethinus HOM05D005086 ORTHO05D005980 5.6e-23 110.9 70 72.9
Nn5g28612 Nelumbo nucifera HOM05D005086 ORTHO05D005980 1.6e-22 109.4 66 74.2
Pp3c14_16130 Physcomitrium patens HOM05D005086 ORTHO05D005980 2.8e-22 108.6 70 67.1
AUR62030231 Chenopodium quinoa HOM05D005086 ORTHO05D005980 8.1e-22 107.1 89 60.7
SMO174G0205 Selaginella moellendorffii HOM05D005086 ORTHO05D005980 2.0e-20 102.4 77 59.7
MBI06_g41412_MAGBIO Magnolia biondii HOM05D005086 ORTHO05D005980 6.7e-16 87.4 73 58.9
Peaxi162Scf00263g00036 Petunia axillaris HOM05D005086 ORTHO05D005980 1.1e-10 70.1 77 48.1


User provided reference genes

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