Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18706 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 6.2e-188 660.6 326 100.0
SEGI_03702 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 7.6e-178 627.1 314 98.1
SEGI_09343 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 1.9e-99 366.7 177 100.0
CAN.G786.40 Capsicum annuum HOM05D005077 ORTHO05D006889 2.2e-60 236.9 227 52.9
Sopen04g005220 Solanum pennellii HOM05D005077 ORTHO05D006889 4.2e-59 232.6 227 52.9
GSVIVG01023486001 Vitis vinifera HOM05D005077 ORTHO05D006889 5.5e-59 232.3 227 50.7
Solyc04g010080.3 Solanum lycopersicum HOM05D005077 ORTHO05D006889 9.3e-59 231.5 227 52.4
ATR0736G030 Amborella trichopoda HOM05D005077 ORTHO05D006889 1.2e-58 231.1 227 49.3
PGSC0003DMG400011494 Solanum tuberosum HOM05D005077 ORTHO05D006889 1.6e-58 230.7 227 51.5
Gohir.D11G257100 Gossypium hirsutum HOM05D005077 ORTHO05D006889 3.5e-58 229.6 235 51.1
Gorai.007G275500 Gossypium raimondii HOM05D005077 ORTHO05D006889 3.5e-58 229.6 235 51.1
Gohir.A11G246900 Gossypium hirsutum HOM05D005077 ORTHO05D006889 4.6e-58 229.2 228 52.6
Thecc.05G270400 Theobroma cacao HOM05D005077 ORTHO05D006889 7.9e-58 228.4 229 51.5
QL07p018541 Quercus lobata HOM05D005077 ORTHO05D006889 1.0e-57 228.0 227 49.8
COL.COLO4_15493 Corchorus olitorius HOM05D005077 ORTHO05D006889 1.3e-57 227.6 228 53.1
Hund06905 Selenicereus undatus HOM05D005077 ORTHO05D006889 1.8e-57 227.3 226 51.8
Ciclev10019185m.g Citrus clementina HOM05D005077 ORTHO05D006889 2.3e-57 226.9 231 51.1
Manes.08G139800 Manihot esculenta HOM05D005077 ORTHO05D006889 8.7e-57 224.9 227 49.3
Nn1g02888 Nelumbo nucifera HOM05D005077 ORTHO05D006889 1.5e-56 224.2 229 50.2
Aqoxy5G00195 Aquilegia oxysepala HOM05D005077 ORTHO05D006889 1.9e-56 223.8 229 50.7
MD04G1230700 Malus domestica HOM05D005077 ORTHO05D006889 2.5e-56 223.4 227 51.1
Lj2A44T74 Lonicera japonica HOM05D005077 ORTHO05D006889 3.3e-56 223.0 229 49.8
BcaB04g19332 Brassica carinata HOM05D005077 ORTHO05D006889 5.6e-56 222.2 228 50.4
Cfa006359 Carpinus fangiana HOM05D005077 ORTHO05D006889 5.6e-56 222.2 229 48.0
CSS0033596 Camellia sinensis var. sinensis HOM05D005077 ORTHO05D006889 7.4e-56 221.9 228 50.4
Cpa.g.sc306.8 Carica papaya HOM05D005077 ORTHO05D006889 7.4e-56 221.9 231 49.8
Duzib177G0384 Durio zibethinus HOM05D005077 ORTHO05D006889 9.6e-56 221.5 229 50.7
AUR62013106 Chenopodium quinoa HOM05D005077 ORTHO05D006889 1.3e-55 221.1 241 46.9
CARHR078630 Cardamine hirsuta HOM05D005077 ORTHO05D006889 1.6e-55 220.7 231 48.1
Eucgr.B02151 Eucalyptus grandis HOM05D005077 ORTHO05D006889 1.6e-55 220.7 227 48.9
Os02g0810450 Oryza sativa ssp. japonica HOM05D005077 ORTHO05D006889 1.6e-55 220.7 226 47.3
Thhalv10020155m.g Eutrema salsugineum HOM05D005077 ORTHO05D006889 2.1e-55 220.3 229 50.2
Zm00001eb258450 Zea mays HOM05D005077 ORTHO05D006889 2.8e-55 219.9 226 48.7
AL3G14430 Arabidopsis lyrata HOM05D005077 ORTHO05D006889 8.2e-55 218.4 228 49.6
BcaC01g04375 Brassica carinata HOM05D005077 ORTHO05D006889 8.2e-55 218.4 228 49.1
C03p40820 Brassica napus HOM05D005077 ORTHO05D006889 8.2e-55 218.4 228 49.1
Sp3g03330 Schrenkiella parvula HOM05D005077 ORTHO05D006889 8.2e-55 218.4 228 49.1
AT3G04480 Arabidopsis thaliana HOM05D005077 ORTHO05D006889 1.1e-54 218.0 228 48.7
C05p62770 Brassica napus HOM05D005077 ORTHO05D006889 1.1e-54 218.0 228 49.1
TAR362G0145 Trochodendron aralioides HOM05D005077 ORTHO05D006889 1.1e-54 218.0 227 50.2
BcaC05g29939 Brassica carinata HOM05D005077 ORTHO05D006889 1.4e-54 217.6 227 49.3
BolC5t34930H Brassica oleracea HOM05D005077 ORTHO05D006889 1.8e-54 217.2 228 49.1
EL10Ac9g21459 Beta vulgaris HOM05D005077 ORTHO05D006889 2.4e-54 216.9 231 47.6
Eucgr.B02424 Eucalyptus grandis HOM05D005077 ORTHO05D006889 3.1e-54 216.5 226 48.7
MBI10_g13801_MAGBIO Magnolia biondii HOM05D005077 ORTHO05D006889 3.1e-54 216.5 227 49.8
Sed0014730 Sechium edule HOM05D005077 ORTHO05D006889 3.1e-54 216.5 236 46.6
THA.LOC104827285 Tarenaya hassleriana HOM05D005077 ORTHO05D006889 3.1e-54 216.5 232 47.4
BcaC05g30222 Brassica carinata HOM05D005077 ORTHO05D006889 4.0e-54 216.1 228 49.1
BraA05t23044Z Brassica rapa HOM05D005077 ORTHO05D006889 4.0e-54 216.1 228 48.7
Prupe.6G350500 Prunus persica HOM05D005077 ORTHO05D006889 4.0e-54 216.1 240 48.3
Hma1.2p1_0114F.1_g055300 Hydrangea macrophylla HOM05D005077 ORTHO05D006889 5.3e-54 215.7 228 48.7
RcHm_v2.0_Chr3g0449521 Rosa chinensis HOM05D005077 ORTHO05D006889 5.3e-54 215.7 229 48.9
Sabra19G0032000 Salix brachista HOM05D005077 ORTHO05D006889 5.3e-54 215.7 240 47.1
Atru.chr2.993 Acer truncatum HOM05D005077 ORTHO05D006889 6.9e-54 215.3 228 48.7
Aa31LG5G14920 Aethionema arabicum HOM05D005077 ORTHO05D006889 9.0e-54 214.9 231 47.6
Sabra13G0043400 Salix brachista HOM05D005077 ORTHO05D006889 9.0e-54 214.9 240 47.1
BraA03t12537Z Brassica rapa HOM05D005077 ORTHO05D006889 1.5e-53 214.2 228 47.8
Potri.013G047400 Populus trichocarpa HOM05D005077 ORTHO05D006889 1.5e-53 214.2 242 48.8
Carub.0003s0364 Capsella rubella HOM05D005077 ORTHO05D006889 2.6e-53 213.4 228 47.4
A05p43000 Brassica napus HOM05D005077 ORTHO05D006889 3.4e-53 213.0 228 48.2
BolC3t16351H Brassica oleracea HOM05D005077 ORTHO05D006889 5.8e-53 212.2 228 48.7
PSO210G4243 Papaver somniferum HOM05D005077 ORTHO05D006889 5.8e-53 212.2 229 48.0
Potri.019G019600 Populus trichocarpa HOM05D005077 ORTHO05D006889 5.8e-53 212.2 227 47.1
SalBow3G3009 Salvia bowleyana HOM05D005077 ORTHO05D006889 5.8e-53 212.2 227 47.1
HPP92_014753 Vanilla planifolia HOM05D005077 ORTHO05D006889 5.8e-53 212.2 230 47.8
PGR142G0621 Punica granatum HOM05D005077 ORTHO05D006889 7.6e-53 211.8 226 50.0
TWI36G1092 Tripterygium wilfordii HOM05D005077 ORTHO05D006889 7.6e-53 211.8 226 47.3
PSO832G3809 Papaver somniferum HOM05D005077 ORTHO05D006889 1.0e-52 211.5 229 48.0
FAN14G3018 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.3e-52 211.1 229 48.5
FAN14G2113 Fragaria x ananassa HOM05D005077 ORTHO05D006889 1.7e-52 210.7 229 48.0
Oeu006006.2 Olea europaea HOM05D005077 ORTHO05D006889 1.7e-52 210.7 236 47.5
CiPaw.07G073200 Carya illinoinensis HOM05D005077 ORTHO05D006889 2.9e-52 209.9 227 48.0
CsaV3_2G009810 Cucumis sativus L. HOM05D005077 ORTHO05D006889 2.9e-52 209.9 236 47.9
Psat3g087440 Pisum sativum HOM05D005077 ORTHO05D006889 3.8e-52 209.5 235 47.2
Sc20g0000660 Simmondsia chinensis HOM05D005077 ORTHO05D006889 4.9e-52 209.1 226 48.2
vmacro19987 Vaccinium macrocarpon HOM05D005077 ORTHO05D006889 4.9e-52 209.1 228 46.9
Actinidia39994 Actinidia chinensis HOM05D005077 ORTHO05D006889 6.5e-52 208.8 231 48.1
ECA238G3062 Erigeron canadensis HOM05D005077 ORTHO05D006889 6.5e-52 208.8 227 48.9
FvH4_6g01810 Fragaria vesca HOM05D005077 ORTHO05D006889 6.5e-52 208.8 229 48.0
Cc02_g08770 Coffea canephora HOM05D005077 ORTHO05D006889 8.4e-52 208.4 229 48.5
A03p33620 Brassica napus HOM05D005077 ORTHO05D006889 1.4e-51 207.6 229 48.9
Nitab4.5_0006737g0070 Nicotiana tabacum HOM05D005077 ORTHO05D006889 2.5e-51 206.8 215 49.8
FAN09G0372 Fragaria x ananassa HOM05D005077 ORTHO05D006889 3.2e-51 206.5 229 48.0
Lj1g0022218 Lotus japonicus HOM05D005077 ORTHO05D006889 3.2e-51 206.5 235 49.4
Rhsim05G0172000 Rhododendron simsii HOM05D005077 ORTHO05D006889 4.2e-51 206.1 232 47.0
Medtr7g111650 Medicago truncatula HOM05D005077 ORTHO05D006889 5.5e-51 205.7 230 45.7
ClCG11G010550 Citrullus lanatus HOM05D005077 ORTHO05D006889 7.1e-51 205.3 233 46.8
CANSAT54G1999 Cannabis sativa HOM05D005077 ORTHO05D006889 1.6e-50 204.1 229 47.2
MELO3C008703.2 Cucumis melo HOM05D005077 ORTHO05D006889 2.1e-50 203.8 240 45.0
Peaxi162Scf00528g00225 Petunia axillaris HOM05D005077 ORTHO05D006889 2.1e-50 203.8 215 49.8
Lalb_Chr22g0358841 Lupinus albus HOM05D005077 ORTHO05D006889 4.6e-50 202.6 235 46.0
SGA_v2.0_scaffold1G00651 Striga asiatica HOM05D005077 ORTHO05D006889 6.0e-50 202.2 230 45.7
Glyma.19G115700 Glycine max HOM05D005077 ORTHO05D006889 1.3e-49 201.1 236 47.5
Oeu041238.1 Olea europaea HOM05D005077 ORTHO05D006889 3.0e-49 199.9 231 45.5
VMungo1383G1518 Vigna mungo HOM05D005077 ORTHO05D006889 6.7e-49 198.7 235 45.5
Migut.F00798 Erythranthe guttata HOM05D005077 ORTHO05D006889 8.7e-49 198.4 227 46.3
MSTRG.27374 Avicennia marina HOM05D005077 ORTHO05D006889 1.1e-48 198.0 230 45.7
TPR.G4698 Trifolium pratense HOM05D005077 ORTHO05D006889 1.5e-48 197.6 231 45.0
Lsat_1_v5_gn_2_108321 Lactuca sativa HOM05D005077 ORTHO05D006889 1.9e-48 197.2 230 44.8
Phvul.001G114900 Phaseolus vulgaris HOM05D005077 ORTHO05D006889 1.9e-48 197.2 236 47.0
HanXRQChr14g0454211 Helianthus annuus HOM05D005077 ORTHO05D006889 4.3e-48 196.1 226 45.6
Ca_08303_v3 Cicer arietinum L. HOM05D005077 ORTHO05D006889 1.3e-47 194.5 257 42.0
DCAR_003547 Daucus carota HOM05D005077 ORTHO05D006889 2.2e-47 193.7 233 44.6
AagrBONN_evm.TU.Sc2ySwM_362.1555 Anthoceros agrestis HOM05D005077 ORTHO05D006889 4.8e-47 192.6 235 43.0
unitig_748.g6990 Utricularia gibba HOM05D005077 ORTHO05D006889 1.8e-46 190.7 228 43.0
arahy.Tifrunner.gnm1.ann1.2V8KIQ Arachis hypogaea HOM05D005077 ORTHO05D006889 3.4e-45 186.4 229 46.7
Nitab4.5_0003780g0090 Nicotiana tabacum HOM05D005077 ORTHO05D006889 3.4e-45 186.4 233 44.2
BcaC05g30195 Brassica carinata HOM05D005077 ORTHO05D006889 3.8e-44 183.0 228 44.3
Mapoly0027s0145 Marchantia polymorpha HOM05D005077 ORTHO05D006889 2.1e-42 177.2 231 39.4
SEGI_07361 Sequoiadendron giganteum HOM05D000946 ORTHO05D000773 5.7e-40 169.1 88 95.5
AUR62010111 Chenopodium quinoa HOM05D005077 ORTHO05D006889 9.7e-40 168.3 173 48.0
Pp3c11_830 Physcomitrium patens HOM05D005077 ORTHO05D006889 1.3e-39 167.9 230 39.1
arahy.Tifrunner.gnm1.ann1.BW8NI8 Arachis hypogaea HOM05D005077 ORTHO05D006889 5.3e-38 162.5 228 42.5
SMO348G0068 Selaginella moellendorffii HOM05D005077 ORTHO05D006889 1.2e-37 161.4 226 40.7
Dinv35947 Davidia involucrata HOM05D005077 ORTHO05D006889 2.0e-37 160.6 228 41.7
arahy.Tifrunner.gnm1.ann1.FVV1VG Arachis hypogaea HOM05D005077 ORTHO05D006889 2.2e-36 157.1 228 41.7
CDE07G0212 Ceratophyllum demersum HOM05D005077 ORTHO05D006889 5.0e-36 156.0 139 53.2
CBR_g3613 Chara braunii HOM05D005077 ORTHO05D006889 6.5e-36 155.6 266 35.7
Haze_04419 Corylus avellana HOM05D005077 ORTHO05D006889 7.2e-35 152.1 232 37.9
PGSC0003DMG400019115 Solanum tuberosum HOM05D005077 ORTHO05D006889 1.0e-33 148.3 106 63.2
arahy.Tifrunner.gnm1.ann1.CACA61 Arachis hypogaea HOM05D005077 ORTHO05D006889 1.2e-26 124.8 233 37.8
SEGI_01626 Sequoiadendron giganteum HOM05D005077 ORTHO05D006889 7.4e-24 115.5 54 100.0
arahy.Tifrunner.gnm1.ann1.2UET99 Arachis hypogaea HOM05D005077 ORTHO05D006889 3.7e-15 86.7 164 37.2
PRCOL_00005667 Prasinoderma coloniale HOM05D005077 ORTHO05D006889 3.1e-14 83.6 96 42.7
MCO10G045 Micromonas commoda HOM05D005077 ORTHO05D006889 7.7e-13 79.0 106 37.7
Peaxi162Scf00528g00025 Petunia axillaris HOM05D000011 ORTHO05D015719 1.2e-10 71.6 59 54.2
FAN05G0362 Fragaria x ananassa HOM05D005077 ORTHO05D006889 6.8e-09 65.9 34 82.4
Cre01.g033091 Chlamydomonas reinhardtii HOM05D005077 ORTHO05D006889 7.5e-08 62.4 127 33.9
Duzib106G1915 Durio zibethinus HOM05D005077 ORTHO05D006889 1.3e-07 61.6 62 50.0


User provided reference genes

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