Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.3e-108 396.4 196 100.0
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.3e-108 396.4 196 100.0
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 8.9e-89 330.5 165 98.8
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 1.9e-54 216.5 134 81.3
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 3.2e-54 215.7 129 83.7
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 5.1e-52 208.4 131 82.4
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 1.1e-46 190.7 179 60.9
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 7.1e-46 188.0 179 59.8
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 3.5e-45 185.7 113 84.1
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.9e-44 182.2 106 83.0
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 3.9e-44 182.2 106 82.1
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.5e-43 179.5 105 81.9
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 7.3e-43 177.9 108 80.6
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 3.6e-42 175.6 105 81.0
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 3.6e-42 175.6 146 68.5
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 8.1e-42 174.5 105 81.0
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 8.1e-42 174.5 151 62.3
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 2.4e-41 172.9 107 79.4
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 3.1e-41 172.6 105 81.0
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 1.2e-40 170.6 103 80.6
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 5.8e-40 168.3 125 72.0
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 5.8e-40 168.3 125 72.0
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 5.8e-40 168.3 125 72.0
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 7.6e-40 167.9 133 69.9
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 7.6e-40 167.9 133 69.9
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 1.7e-39 166.8 198 51.5
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 3.3e-35 152.5 98 76.5
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.3e-28 129.8 95 68.4
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 6.9e-25 118.2 104 61.5
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 7.1e-22 108.2 78 66.7
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 1.4e-17 94.0 107 50.5
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 6.1e-13 78.6 121 41.3
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 1.4e-12 77.4 45 82.2
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 3.3e-11 72.8 121 30.6
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 7.4e-11 71.6 95 49.5
Haze_27121 Corylus avellana HOM05D001750 ORTHO05D001825 2.8e-10 69.7 129 24.8
SHI04797 Sapria himalayana HOM05D008537 ORTHO05D010652 5.3e-09 65.5 126 36.5


User provided reference genes

Program Settings