Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 3.3e-98 361.7 180 100.0
SEGI_22804 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 3.9e-51 205.3 105 98.1
SEGI_24113 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 1.7e-41 173.3 104 83.7
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 4.1e-08 62.4 44 61.4
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 9.2e-08 61.2 43 60.5
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 2.0e-07 60.1 45 55.6
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 2.7e-07 59.7 65 41.5
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 3.5e-07 59.3 44 56.8
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 3.5e-07 59.3 37 62.2
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 3.5e-07 59.3 37 62.2
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 3.5e-07 59.3 43 53.5
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 4.6e-07 58.9 41 56.1
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.6e-07 58.9 41 56.1
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 7.8e-07 58.2 60 43.3
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 1.0e-06 57.8 39 59.0
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 1.3e-06 57.4 58 46.6
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.7e-06 57.0 39 56.4
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.7e-06 57.0 31 71.0
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 2.3e-06 56.6 31 71.0
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 2.3e-06 56.6 41 53.7
ATR0796G230 Amborella trichopoda HOM05D017498 ORTHO05D019559 3.0e-06 56.2 47 44.7
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 3.0e-06 56.2 31 67.7
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 3.0e-06 56.2 39 56.4
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 3.9e-06 55.8 39 59.0
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 3.9e-06 55.8 31 64.5
ATR0796G176 Amborella trichopoda HOM05D017498 ORTHO05D019559 5.0e-06 55.5 77 33.8
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 5.0e-06 55.5 62 41.9
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 5.0e-06 55.5 44 50.0
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 5.0e-06 55.5 31 67.7
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 5.0e-06 55.5 31 67.7
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 6.6e-06 55.1 41 51.2
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 6.6e-06 55.1 34 64.7
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 6.6e-06 55.1 33 60.6
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 8.6e-06 54.7 51 43.1
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 8.6e-06 54.7 38 57.9
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 8.6e-06 54.7 84 41.7


User provided reference genes

Program Settings