Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18478 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 5.0e-73 277.7 145 100.0
SEGI_03545 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 9.0e-46 187.2 145 64.8
SEGI_07270 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 2.6e-37 159.1 145 60.0
SEGI_14475 Sequoiadendron giganteum HOM05D026807 ORTHO05D004417 2.3e-33 146.0 124 62.1
SEGI_27005 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 3.8e-12 75.5 81 53.1
SEGI_14476 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 5.0e-12 75.1 122 39.3
SEGI_10792 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 1.6e-10 70.1 119 43.7
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 2.1e-10 69.7 122 34.4
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 1.0e-09 67.4 119 36.1
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 5.1e-09 65.1 136 30.1
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 6.7e-09 64.7 131 32.1
Oeu006461.1 Olea europaea HOM05D003529 ORTHO05D004106 8.8e-09 64.3 136 33.1
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.1e-08 63.9 125 36.0
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.5e-08 63.5 129 29.5
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 1.5e-08 63.5 129 33.3
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 2.0e-08 63.2 146 28.8
C04p00390 Brassica napus HOM05D003529 ORTHO05D004106 2.5e-08 62.8 120 33.3
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 2.5e-08 62.8 130 34.6
AL4G47050 Arabidopsis lyrata HOM05D003529 ORTHO05D004106 3.3e-08 62.4 120 35.8
Thhalv10001673m.g Eutrema salsugineum HOM05D003529 ORTHO05D004106 4.3e-08 62.0 121 33.1
AT2G47485 Arabidopsis thaliana HOM05D003529 ORTHO05D004106 5.7e-08 61.6 120 32.5
BolC4t21684H Brassica oleracea HOM05D003529 ORTHO05D004106 5.7e-08 61.6 120 33.3
Aqoxy2G02834 Aquilegia oxysepala HOM05D003529 ORTHO05D004106 7.4e-08 61.2 142 31.7
CARHR142880 Cardamine hirsuta HOM05D003529 ORTHO05D004106 7.4e-08 61.2 120 32.5
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 7.4e-08 61.2 123 34.1
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 7.4e-08 61.2 123 34.1
Actinidia25830 Actinidia chinensis HOM05D001306 ORTHO05D001159 1.3e-07 60.5 142 30.3
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.3e-07 60.5 126 30.2
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 1.3e-07 60.5 124 36.3
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.3e-07 60.5 122 33.6
Oeu011480.1 Olea europaea HOM05D003529 ORTHO05D004106 1.3e-07 60.5 136 33.1
Gohir.D11G117100 Gossypium hirsutum HOM05D003529 ORTHO05D004106 2.2e-07 59.7 115 34.8
Gorai.007G125400 Gossypium raimondii HOM05D003529 ORTHO05D004106 2.2e-07 59.7 115 34.8
A05p00440 Brassica napus HOM05D003529 ORTHO05D004106 2.8e-07 59.3 120 31.7
BraA05t19042Z Brassica rapa HOM05D003529 ORTHO05D004106 2.8e-07 59.3 120 31.7
Cc01_g21210 Coffea canephora HOM05D003529 ORTHO05D004106 2.8e-07 59.3 121 34.7
Gohir.A11G112000 Gossypium hirsutum HOM05D003529 ORTHO05D004106 4.8e-07 58.5 115 33.9
MBI10_g08537_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 4.8e-07 58.5 122 36.9
Migut.D00112 Erythranthe guttata HOM05D003529 ORTHO05D004106 8.2e-07 57.8 132 31.8
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 8.2e-07 57.8 122 32.8
CAN.G668.31 Capsicum annuum HOM05D003529 ORTHO05D004106 1.1e-06 57.4 121 30.6
Cc01_g04570 Coffea canephora HOM05D003529 ORTHO05D004106 1.1e-06 57.4 122 34.4
CsaV3_4G001080 Cucumis sativus L. HOM05D003529 ORTHO05D004106 1.1e-06 57.4 121 33.1
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 1.1e-06 57.4 124 33.1
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.1e-06 57.4 123 34.1
SEGI_21943 Sequoiadendron giganteum HOM05D003529 ORTHO05D004106 1.1e-06 57.4 117 35.9
Cpa.g.sc151.47 Carica papaya HOM05D003529 ORTHO05D004106 1.4e-06 57.0 127 32.3
CiPaw.07G113900 Carya illinoinensis HOM05D003529 ORTHO05D004106 1.4e-06 57.0 133 31.6
AT3G62650 Arabidopsis thaliana HOM05D003529 ORTHO05D004106 1.8e-06 56.6 121 33.9
CARHR172920 Cardamine hirsuta HOM05D003529 ORTHO05D004106 1.8e-06 56.6 123 31.7
Sp5g00860 Schrenkiella parvula HOM05D003529 ORTHO05D004106 1.8e-06 56.6 118 32.2
BcaB02g08109 Brassica carinata HOM05D003529 ORTHO05D004106 2.4e-06 56.2 119 32.8
CANSAT25G0832 Cannabis sativa HOM05D003529 ORTHO05D004106 2.4e-06 56.2 120 34.2
Ca_29579_v3 Cicer arietinum L. HOM05D003529 ORTHO05D004106 2.4e-06 56.2 122 31.1
RcHm_v2.0_Chr7g0242001 Rosa chinensis HOM05D003529 ORTHO05D004106 2.4e-06 56.2 143 31.5
AL5G45400 Arabidopsis lyrata HOM05D003529 ORTHO05D004106 3.1e-06 55.8 120 32.5
Nitab4.5_0005587g0040 Nicotiana tabacum HOM05D003529 ORTHO05D004106 3.1e-06 55.8 129 34.9
TAR622G1405 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.1e-06 55.8 78 39.7
BcaC07g40776 Brassica carinata HOM05D003529 ORTHO05D004106 4.1e-06 55.5 119 32.8
CiPaw.05G243300 Carya illinoinensis HOM05D004062 ORTHO05D004417 4.1e-06 55.5 130 31.5
Dinv31584 Davidia involucrata HOM05D004062 ORTHO05D004417 4.1e-06 55.5 78 41.0
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 4.1e-06 55.5 125 28.8
Manes.01G224100 Manihot esculenta HOM05D003529 ORTHO05D004106 5.3e-06 55.1 123 32.5
Sp4g29420 Schrenkiella parvula HOM05D003529 ORTHO05D004106 5.3e-06 55.1 119 31.9
Sed0025326 Sechium edule HOM05D003529 ORTHO05D004106 5.3e-06 55.1 133 33.8
A07p26020 Brassica napus HOM05D003529 ORTHO05D004106 6.9e-06 54.7 118 32.2
BolC6t38003H Brassica oleracea HOM05D003529 ORTHO05D004106 6.9e-06 54.7 118 32.2
BraA07t30250Z Brassica rapa HOM05D003529 ORTHO05D004106 6.9e-06 54.7 118 32.2
ClCG10G011190 Citrullus lanatus HOM05D003529 ORTHO05D004106 9.1e-06 54.3 145 29.7
SHI19869 Sapria himalayana HOM05D000024 ORTHO05D000007 9.1e-06 54.3 150 30.7


User provided reference genes

Program Settings