Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18344 Sequoiadendron giganteum HOM05D004939 ORTHO05D005843 4.1e-133 478.0 235 100.0
ATR0605G152 Amborella trichopoda HOM05D004939 ORTHO05D005843 5.6e-21 105.5 150 40.7
QL02p016036 Quercus lobata HOM05D004939 ORTHO05D005843 8.9e-19 98.2 113 46.0
Oeu035772.5 Olea europaea HOM05D004939 ORTHO05D005843 1.2e-18 97.8 151 40.4
Cc10_g00160 Coffea canephora HOM05D004939 ORTHO05D005843 1.5e-18 97.4 115 42.6
Nn5g31070 Nelumbo nucifera HOM05D004939 ORTHO05D005843 2.0e-18 97.1 142 43.7
ECA238G2856 Erigeron canadensis HOM05D004939 ORTHO05D005843 7.5e-18 95.1 134 44.8
SalBow6G2808 Salvia bowleyana HOM05D004939 ORTHO05D005843 7.5e-18 95.1 131 44.3
CSS0014437 Camellia sinensis var. sinensis HOM05D004939 ORTHO05D005843 2.9e-17 93.2 124 45.2
Migut.N02996 Erythranthe guttata HOM05D004939 ORTHO05D005843 2.9e-17 93.2 124 45.2
Peaxi162Scf00385g00719 Petunia axillaris HOM05D004939 ORTHO05D005843 2.9e-17 93.2 143 42.7
Solyc04g082900.4 Solanum lycopersicum HOM05D004939 ORTHO05D005843 2.9e-17 93.2 117 45.3
PGSC0003DMG400010009 Solanum tuberosum HOM05D004939 ORTHO05D005843 2.9e-17 93.2 116 45.7
Atru.chr13.32 Acer truncatum HOM05D004939 ORTHO05D005843 3.7e-17 92.8 145 41.4
Aqoxy6G03042 Aquilegia oxysepala HOM05D004939 ORTHO05D005843 3.7e-17 92.8 118 43.2
CAN.G1330.25 Capsicum annuum HOM05D004939 ORTHO05D005843 3.7e-17 92.8 108 46.3
Lalb_Chr17g0338141 Lupinus albus HOM05D004939 ORTHO05D005843 3.7e-17 92.8 105 48.6
PSO170G6093 Papaver somniferum HOM05D004939 ORTHO05D005843 6.4e-17 92.0 130 43.8
Lsat_1_v5_gn_2_3201 Lactuca sativa HOM05D004939 ORTHO05D005843 8.3e-17 91.7 132 41.7
Cfa014153 Carpinus fangiana HOM05D004939 ORTHO05D005843 1.1e-16 91.3 120 45.8
Hma1.2p1_0914F.1_g236160 Hydrangea macrophylla HOM05D004939 ORTHO05D005843 1.1e-16 91.3 135 44.4
Sopen04g036540 Solanum pennellii HOM05D004939 ORTHO05D005843 1.1e-16 91.3 136 42.6
Nitab4.5_0000464g0110 Nicotiana tabacum HOM05D004939 ORTHO05D005843 1.4e-16 90.9 145 41.4
Ca_12499_v3 Cicer arietinum L. HOM05D004939 ORTHO05D005843 1.8e-16 90.5 136 43.4
PSO017G2996 Papaver somniferum HOM05D004939 ORTHO05D005843 1.8e-16 90.5 130 43.8
Sabra05G0200000 Salix brachista HOM05D004939 ORTHO05D005843 1.8e-16 90.5 100 48.0
Thecc.10G149200 Theobroma cacao HOM05D004939 ORTHO05D005843 1.8e-16 90.5 105 48.6
FvH4_5g26460 Fragaria vesca HOM05D004939 ORTHO05D005843 2.4e-16 90.1 137 40.9
FAN04G1628 Fragaria x ananassa HOM05D004939 ORTHO05D005843 2.4e-16 90.1 137 41.6
FAN13G2929 Fragaria x ananassa HOM05D004939 ORTHO05D005843 2.4e-16 90.1 137 40.9
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 2.4e-16 90.1 156 41.0
Actinidia37902 Actinidia chinensis HOM05D004939 ORTHO05D005843 3.2e-16 89.7 127 41.7
Gohir.D05G283800 Gossypium hirsutum HOM05D004939 ORTHO05D005843 3.2e-16 89.7 105 47.6
DCAR_023017 Daucus carota HOM05D004939 ORTHO05D005843 4.1e-16 89.4 141 40.4
HanXRQChr14g0427951 Helianthus annuus HOM05D004939 ORTHO05D005843 4.1e-16 89.4 137 40.9
Gohir.A05G282600 Gossypium hirsutum HOM05D004939 ORTHO05D005843 5.4e-16 89.0 105 47.6
Gohir.D05G283802 Gossypium hirsutum HOM05D004939 ORTHO05D005843 5.4e-16 89.0 105 47.6
Gorai.009G298300 Gossypium raimondii HOM05D004939 ORTHO05D005843 5.4e-16 89.0 105 47.6
FAN18G1404 Fragaria x ananassa HOM05D004939 ORTHO05D005843 1.2e-15 87.8 137 40.1
Duzib128G1725 Durio zibethinus HOM05D004939 ORTHO05D005843 1.6e-15 87.4 105 46.7
Prupe.5G002900 Prunus persica HOM05D004939 ORTHO05D005843 1.6e-15 87.4 138 39.1
TPR.G22378 Trifolium pratense HOM05D004939 ORTHO05D005843 1.6e-15 87.4 136 43.4
GSVIVG01013446001 Vitis vinifera HOM05D004939 ORTHO05D005843 1.6e-15 87.4 140 40.7
RcHm_v2.0_Chr7g0217371 Rosa chinensis HOM05D004939 ORTHO05D005843 2.0e-15 87.0 119 42.0
unitig_85.g27224 Utricularia gibba HOM05D004939 ORTHO05D005843 2.0e-15 87.0 124 39.5
Manes.05G129700 Manihot esculenta HOM05D004939 ORTHO05D005843 2.7e-15 86.7 144 41.7
Potri.002G002900 Populus trichocarpa HOM05D004939 ORTHO05D005843 2.7e-15 86.7 141 37.6
Zm00001eb236510 Zea mays HOM05D004939 ORTHO05D005843 3.5e-15 86.3 121 43.0
Ciclev10001515m.g Citrus clementina HOM05D004939 ORTHO05D005843 4.6e-15 85.9 131 42.0
FAN08G1940 Fragaria x ananassa HOM05D004939 ORTHO05D005843 4.6e-15 85.9 137 40.1
TWI56G0687 Tripterygium wilfordii HOM05D004939 ORTHO05D005843 4.6e-15 85.9 108 47.2
Haze_22877 Corylus avellana HOM05D004939 ORTHO05D005843 5.9e-15 85.5 120 42.5
Glyma.07G159700 Glycine max HOM05D004939 ORTHO05D005843 5.9e-15 85.5 147 38.8
CSS0031643 Camellia sinensis var. sinensis HOM05D004939 ORTHO05D005843 7.8e-15 85.1 117 44.4
Eucgr.F03614 Eucalyptus grandis HOM05D004939 ORTHO05D005843 7.8e-15 85.1 140 42.9
Rhsim06G0001700 Rhododendron simsii HOM05D004939 ORTHO05D005843 7.8e-15 85.1 136 40.4
Phvul.003G009000 Phaseolus vulgaris HOM05D004939 ORTHO05D005843 1.0e-14 84.7 135 43.0
SGA_v2.0_scaffold220G42609 Striga asiatica HOM05D004939 ORTHO05D005843 1.0e-14 84.7 142 37.3
Lj2g0017318 Lotus japonicus HOM05D004939 ORTHO05D005843 1.3e-14 84.3 141 38.3
Lalb_Chr10g0095291 Lupinus albus HOM05D004939 ORTHO05D005843 1.3e-14 84.3 106 48.1
CiPaw.07G131300 Carya illinoinensis HOM05D004939 ORTHO05D005843 1.7e-14 84.0 136 38.2
Sabra02G0001700 Salix brachista HOM05D004939 ORTHO05D005843 1.7e-14 84.0 152 37.5
Hund05067 Selenicereus undatus HOM05D004939 ORTHO05D005843 2.3e-14 83.6 131 42.7
Glyma.20G006600 Glycine max HOM05D004939 ORTHO05D005843 3.0e-14 83.2 144 38.9
arahy.Tifrunner.gnm1.ann1.6I9FYE Arachis hypogaea HOM05D004939 ORTHO05D005843 8.6e-14 81.6 159 38.4
CANSAT11G2529 Cannabis sativa HOM05D004939 ORTHO05D005843 8.6e-14 81.6 135 35.6
Psat6g131960 Pisum sativum HOM05D004939 ORTHO05D005843 1.1e-13 81.3 138 40.6
MSTRG.22074 Avicennia marina HOM05D004939 ORTHO05D005843 1.5e-13 80.9 124 40.3
MD06G1001900 Malus domestica HOM05D004939 ORTHO05D005843 1.9e-13 80.5 107 43.9
Potri.005G258300 Populus trichocarpa HOM05D004939 ORTHO05D005843 2.5e-13 80.1 142 37.3
SGA_v2.0_scaffold227G43179 Striga asiatica HOM05D004939 ORTHO05D005843 2.5e-13 80.1 136 38.2
THA.LOC104805020 Tarenaya hassleriana HOM05D004939 ORTHO05D005843 2.5e-13 80.1 139 40.3
arahy.Tifrunner.gnm1.ann1.V9NZM2 Arachis hypogaea HOM05D004939 ORTHO05D005843 3.3e-13 79.7 142 38.7
AUR62035188 Chenopodium quinoa HOM05D004939 ORTHO05D005843 4.3e-13 79.3 141 39.7
VMungo1215G1457 Vigna mungo HOM05D004939 ORTHO05D005843 4.3e-13 79.3 149 35.6
MELO3C017066.2 Cucumis melo HOM05D004939 ORTHO05D005843 5.6e-13 79.0 129 41.9
HPP92_020523 Vanilla planifolia HOM05D004939 ORTHO05D005843 9.5e-13 78.2 133 36.1
CsaV3_4G037720 Cucumis sativus L. HOM05D004939 ORTHO05D005843 1.6e-12 77.4 100 46.0
C01p41420 Brassica napus HOM05D004939 ORTHO05D005843 2.1e-12 77.0 150 37.3
Os02g0193600 Oryza sativa ssp. japonica HOM05D004939 ORTHO05D005843 2.1e-12 77.0 138 36.2
PGR031G2869 Punica granatum HOM05D004939 ORTHO05D005843 2.1e-12 77.0 153 33.3
Medtr1g035090 Medicago truncatula HOM05D004939 ORTHO05D005843 2.8e-12 76.6 136 38.2
Aa31LG9G13490 Aethionema arabicum HOM05D004939 ORTHO05D005843 4.7e-12 75.9 121 38.0
ClCG11G019130 Citrullus lanatus HOM05D004939 ORTHO05D005843 8.0e-12 75.1 98 41.8
BcaB06g28697 Brassica carinata HOM05D004939 ORTHO05D005843 1.0e-11 74.7 164 36.0
BcaC09g49204 Brassica carinata HOM05D004939 ORTHO05D005843 1.0e-11 74.7 139 36.0
BolC1t04101H Brassica oleracea HOM05D004939 ORTHO05D005843 1.0e-11 74.7 150 36.7
Sed0003879 Sechium edule HOM05D004939 ORTHO05D005843 5.2e-11 72.4 99 41.4
EL10Ac1g01845 Beta vulgaris HOM05D004939 ORTHO05D005843 8.9e-11 71.6 141 37.6
Sp4g15900 Schrenkiella parvula HOM05D004939 ORTHO05D005843 3.4e-10 69.7 136 36.0
AL4G29230 Arabidopsis lyrata HOM05D004939 ORTHO05D005843 5.8e-10 68.9 133 33.8
BcaC08g45668 Brassica carinata HOM05D004939 ORTHO05D005843 7.5e-10 68.6 137 35.8
Carub.0004s1519 Capsella rubella HOM05D004939 ORTHO05D005843 7.5e-10 68.6 134 34.3
BcaC02g11440 Brassica carinata HOM05D004939 ORTHO05D005843 9.8e-10 68.2 136 35.3
Thhalv10016779m.g Eutrema salsugineum HOM05D004939 ORTHO05D005843 1.3e-09 67.8 137 35.0
BcaB05g22459 Brassica carinata HOM05D004939 ORTHO05D005843 1.7e-09 67.4 115 37.4
Dinv23346 Davidia involucrata HOM05D004939 ORTHO05D005843 2.2e-09 67.0 63 54.0
AT2G33560 Arabidopsis thaliana HOM05D004939 ORTHO05D005843 3.7e-09 66.2 136 34.6
C04p15520 Brassica napus HOM05D004939 ORTHO05D005843 3.7e-09 66.2 139 34.5
BolC4t23123H Brassica oleracea HOM05D004939 ORTHO05D005843 3.7e-09 66.2 139 34.5
Lj4A813T64 Lonicera japonica HOM05D004939 ORTHO05D005843 6.4e-09 65.5 65 49.2
BraA05t20140Z Brassica rapa HOM05D004939 ORTHO05D005843 4.1e-08 62.8 138 34.1
BcaB02g10574 Brassica carinata HOM05D004939 ORTHO05D005843 1.2e-07 61.2 137 34.3
CARHR127580 Cardamine hirsuta HOM05D004939 ORTHO05D005843 6.0e-07 58.9 140 31.4
BraA02t08500Z Brassica rapa HOM05D004939 ORTHO05D005843 7.8e-07 58.5 122 36.9
A05p11970 Brassica napus HOM05D004939 ORTHO05D005843 1.3e-06 57.8 143 31.5


User provided reference genes

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