Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.8e-129 465.3 237 100.0
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-90 336.3 358 55.3
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.7e-87 324.3 351 54.7
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-78 296.6 293 58.0
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-64 250.4 261 56.3
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-53 214.2 125 84.0
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.3e-53 212.6 132 78.8
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-52 210.7 294 46.3
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 6.1e-52 208.4 125 82.4
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 6.1e-52 208.4 125 82.4
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.6e-50 203.0 175 63.4
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.7e-50 201.8 125 80.0
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-48 196.4 124 78.2
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.0e-48 194.9 144 70.1
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.5e-47 192.6 124 75.0
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.8e-42 175.3 105 80.0
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.8e-42 174.5 115 77.4
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-41 173.7 126 69.0
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.9e-41 172.2 95 88.4
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 1.4e-40 170.6 137 65.0
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.2e-36 155.2 98 77.6
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.2e-35 152.1 87 83.9
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 4.1e-32 142.5 267 34.8
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 1.6e-31 140.6 325 27.7
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-30 137.1 81 84.0
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 2.3e-30 136.7 333 29.7
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.9e-30 136.0 332 30.4
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 6.6e-30 135.2 300 32.0
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.1e-29 134.4 290 31.4
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 1.1e-29 134.4 345 30.1
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 1.5e-29 134.0 332 30.4
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 2.5e-29 133.3 331 28.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.6e-28 130.6 324 30.6
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 6.2e-28 128.6 123 52.0
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 8.1e-28 128.3 336 28.6
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 8.1e-28 128.3 330 27.9
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.4e-27 127.5 129 48.1
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 1.8e-27 127.1 148 42.6
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.8e-27 127.1 123 51.2
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.8e-27 127.1 327 28.1
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 5.2e-27 125.6 128 48.4
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 5.2e-27 125.6 123 48.8
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 6.8e-27 125.2 329 28.3
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 8.9e-27 124.8 123 50.4
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 2.0e-26 123.6 331 27.5
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.0e-26 123.6 129 46.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 3.4e-26 122.9 328 28.0
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 3.4e-26 122.9 141 44.7
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 3.4e-26 122.9 128 45.3
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 4.4e-26 122.5 332 28.0
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 7.6e-26 121.7 328 27.1
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 7.6e-26 121.7 332 28.0
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 7.6e-26 121.7 348 27.3
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 9.9e-26 121.3 338 29.0
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 9.9e-26 121.3 123 46.3
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 9.9e-26 121.3 332 28.3
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 9.9e-26 121.3 348 27.3
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 9.9e-26 121.3 142 43.7
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.3e-25 120.9 122 48.4
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 1.7e-25 120.6 127 47.2
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 2.2e-25 120.2 122 48.4
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 2.2e-25 120.2 126 45.2
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 2.9e-25 119.8 136 43.4
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 2.9e-25 119.8 329 29.5
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 2.9e-25 119.8 123 48.8
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 3.7e-25 119.4 128 48.4
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 3.7e-25 119.4 348 27.3
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 4.9e-25 119.0 129 42.6
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 6.4e-25 118.6 143 42.7
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.4e-24 117.5 128 45.3
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.4e-24 117.5 140 42.1
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.4e-24 117.5 148 41.9
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 1.9e-24 117.1 125 43.2
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 1.9e-24 117.1 142 41.5
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 1.9e-24 117.1 136 41.9
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 2.4e-24 116.7 140 42.9
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 2.4e-24 116.7 123 46.3
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 2.4e-24 116.7 123 47.2
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 3.2e-24 116.3 319 28.8
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 3.2e-24 116.3 319 28.8
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 3.2e-24 116.3 319 28.8
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 4.1e-24 115.9 319 28.5
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 4.1e-24 115.9 140 42.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 4.1e-24 115.9 333 27.6
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 4.1e-24 115.9 142 41.5
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 5.4e-24 115.5 144 41.0
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 5.4e-24 115.5 279 31.5
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 7.1e-24 115.2 298 28.5
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 9.2e-24 114.8 328 26.8
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 9.2e-24 114.8 296 29.4
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 1.6e-23 114.0 129 41.1
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 2.1e-23 113.6 326 27.9
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.1e-23 113.6 296 30.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.1e-23 113.6 301 29.6
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.1e-23 113.6 296 30.7
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 2.1e-23 113.6 145 40.7
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 2.7e-23 113.2 325 28.3
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-23 113.2 73 79.5
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 3.5e-23 112.8 311 29.3
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 3.5e-23 112.8 303 27.7
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 4.6e-23 112.5 129 44.2
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 4.6e-23 112.5 139 41.0
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 6.0e-23 112.1 142 41.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 6.0e-23 112.1 139 41.0
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 6.0e-23 112.1 330 25.2
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 7.8e-23 111.7 332 26.8
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 1.0e-22 111.3 329 28.3
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.0e-22 111.3 143 41.3
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.0e-22 111.3 139 41.0
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 1.3e-22 110.9 148 39.9
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 1.3e-22 110.9 148 39.9
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.3e-22 110.9 338 26.9
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.3e-22 110.9 304 27.6
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.7e-22 110.5 311 27.7
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 1.7e-22 110.5 312 26.6
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 2.3e-22 110.2 319 28.5
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 2.3e-22 110.2 148 39.9
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 2.3e-22 110.2 311 28.6
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.3e-22 110.2 141 39.7
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 3.0e-22 109.8 333 28.5
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 3.0e-22 109.8 329 26.7
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 3.0e-22 109.8 142 38.7
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 3.9e-22 109.4 338 26.9
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 5.1e-22 109.0 141 39.7
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.1e-22 109.0 136 38.2
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 6.6e-22 108.6 125 42.4
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 6.6e-22 108.6 125 42.4
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.6e-22 108.6 141 39.7
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 6.6e-22 108.6 328 26.2
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.5e-21 107.5 296 29.4
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 2.5e-21 106.7 123 43.9
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.5e-21 106.7 327 27.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 3.3e-21 106.3 123 41.5
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 4.3e-21 105.9 326 27.0
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 4.3e-21 105.9 326 26.4
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 7.3e-21 105.1 144 36.8
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 9.6e-21 104.8 144 37.5
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.6e-20 102.8 65 84.6
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 6.2e-20 102.1 123 42.3
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.8e-19 100.5 123 40.7
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 2.4e-19 100.1 326 26.4
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 2.4e-19 100.1 106 47.2
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 6.8e-19 98.6 125 41.6
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 8.9e-19 98.2 148 33.8
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 3.4e-18 96.3 90 48.9
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 9.9e-18 94.7 122 37.7
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.4e-17 91.7 58 84.5
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 4.2e-16 89.4 130 36.9
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.2e-15 87.8 122 37.7
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 3.0e-14 83.2 77 46.8
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-13 80.5 130 33.8
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 3.3e-13 79.7 123 36.6
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 3.3e-13 79.7 124 35.5
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 2.8e-12 76.6 149 30.2
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 7.1e-08 62.0 109 34.9


User provided reference genes

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