Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18237 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 2.1e-199 698.7 340 100.0
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 4.1e-73 279.3 326 46.3
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 7.7e-72 275.0 326 45.4
Aqoxy3G03420 Aquilegia oxysepala HOM05D005118 ORTHO05D006038 1.3e-71 274.2 311 48.9
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 3.9e-68 262.7 323 44.3
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 1.1e-67 261.2 323 43.7
Lj5g0005733 Lotus japonicus HOM05D005118 ORTHO05D006038 2.5e-67 260.0 317 45.4
Mapoly0006s0252 Marchantia polymorpha HOM05D005118 ORTHO05D006038 1.7e-66 257.3 298 45.6
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 6.3e-66 255.4 323 44.9
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 8.2e-66 255.0 308 43.8
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 1.1e-65 254.6 301 44.5
Lj6g0000791 Lotus japonicus HOM05D005118 ORTHO05D006038 1.8e-65 253.8 316 44.0
Lj6g0018590 Lotus japonicus HOM05D005118 ORTHO05D006038 1.8e-65 253.8 316 44.0
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea HOM05D005118 ORTHO05D006038 6.9e-65 251.9 326 41.7
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea HOM05D005118 ORTHO05D006038 6.9e-65 251.9 326 41.7
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 1.2e-64 251.1 323 42.4
TWI77G0553 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 1.2e-64 251.1 323 41.8
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 1.5e-64 250.8 302 44.7
Sopen09g004710 Solanum pennellii HOM05D005118 ORTHO05D006038 2.0e-64 250.4 323 42.1
Ciclev10011946m.g Citrus clementina HOM05D005118 ORTHO05D006038 2.6e-64 250.0 310 43.5
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 5.9e-64 248.8 323 44.0
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 7.7e-64 248.4 312 42.3
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 1.3e-63 247.7 319 44.5
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 1.7e-63 247.3 316 43.7
Ca_00895_v3 Cicer arietinum L. HOM05D005118 ORTHO05D006038 1.7e-63 247.3 324 42.3
Psat6g079520 Pisum sativum HOM05D005118 ORTHO05D006038 1.7e-63 247.3 325 43.1
HanXRQChr08g0212801 Helianthus annuus HOM05D005118 ORTHO05D006038 2.9e-63 246.5 316 42.7
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 3.8e-63 246.1 329 41.6
Pp3c5_18920 Physcomitrium patens HOM05D005118 ORTHO05D006038 3.8e-63 246.1 319 41.4
TWI53G1403 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 3.8e-63 246.1 291 45.0
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 8.5e-63 245.0 297 42.8
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 1.1e-62 244.6 295 46.1
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 1.1e-62 244.6 322 42.5
QL05p009399 Quercus lobata HOM05D005118 ORTHO05D006038 1.4e-62 244.2 341 40.5
TPR.G2549 Trifolium pratense HOM05D005118 ORTHO05D006038 1.4e-62 244.2 325 42.5
Medtr8g095460 Medicago truncatula HOM05D005118 ORTHO05D006038 1.9e-62 243.8 321 43.0
GSVIVG01016776001 Vitis vinifera HOM05D005118 ORTHO05D006038 1.9e-62 243.8 323 41.8
Atru.chr8.1769 Acer truncatum HOM05D005118 ORTHO05D006038 2.5e-62 243.4 324 43.2
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 3.2e-62 243.0 323 41.5
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 4.2e-62 242.7 331 41.1
Medtr1g059790 Medicago truncatula HOM05D005118 ORTHO05D006038 5.5e-62 242.3 319 42.9
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 5.5e-62 242.3 308 42.9
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 7.2e-62 241.9 332 40.7
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 7.2e-62 241.9 303 42.6
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 1.2e-61 241.1 303 42.6
Zm00001eb000710 Zea mays HOM05D005118 ORTHO05D006038 1.2e-61 241.1 326 41.7
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 2.1e-61 240.4 298 44.6
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 2.1e-61 240.4 323 41.8
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 4.7e-61 239.2 312 39.7
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 1.0e-60 238.0 316 40.8
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 1.4e-60 237.7 293 45.4
RcHm_v2.0_Chr3g0474251 Rosa chinensis HOM05D005118 ORTHO05D006038 1.4e-60 237.7 312 42.6
AagrBONN_evm.TU.Sc2ySwM_340.158 Anthoceros agrestis HOM05D005118 ORTHO05D006038 1.8e-60 237.3 305 41.3
AL3G23010 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 2.3e-60 236.9 302 43.7
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.3e-60 236.9 293 45.4
SEGI_32763 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 3.0e-60 236.5 117 99.1
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 3.9e-60 236.1 311 43.1
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 8.8e-60 235.0 306 43.1
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 2.0e-59 233.8 304 44.4
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 2.0e-59 233.8 325 41.8
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 3.3e-59 233.0 325 41.8
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 7.4e-59 231.9 296 44.3
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 7.4e-59 231.9 304 42.8
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 1.3e-58 231.1 292 42.5
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.3e-58 231.1 296 44.3
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 1.3e-58 231.1 325 40.3
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 1.3e-58 231.1 327 41.0
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 1.7e-58 230.7 297 42.1
Sp3g09700 Schrenkiella parvula HOM05D005118 ORTHO05D006038 1.7e-58 230.7 312 42.6
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 2.2e-58 230.3 318 41.2
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 2.2e-58 230.3 305 43.3
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 2.8e-58 229.9 325 39.7
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 2.8e-58 229.9 296 44.3
SMO144G0078 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 2.8e-58 229.9 302 44.0
AT3G11470 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 1.1e-57 228.0 266 45.9
BraA05t22581Z Brassica rapa HOM05D005118 ORTHO05D006038 1.4e-57 227.6 302 43.0
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 1.4e-57 227.6 331 39.9
A05p37870 Brassica napus HOM05D005118 ORTHO05D006038 1.8e-57 227.3 302 42.7
unitig_748.g8118 Utricularia gibba HOM05D005118 ORTHO05D006038 1.8e-57 227.3 311 39.2
Eucgr.A02654 Eucalyptus grandis HOM05D005118 ORTHO05D006038 2.4e-57 226.9 328 39.9
vmacro07419 Vaccinium macrocarpon HOM05D005118 ORTHO05D006038 4.1e-57 226.1 359 37.3
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 7.0e-57 225.3 301 42.9
BcaB06g25621 Brassica carinata HOM05D005118 ORTHO05D006038 1.2e-56 224.6 310 42.6
C05p56660 Brassica napus HOM05D005118 ORTHO05D006038 2.6e-56 223.4 302 43.0
BolC5t34331H Brassica oleracea HOM05D005118 ORTHO05D006038 2.6e-56 223.4 302 43.0
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 5.9e-56 222.2 290 42.8
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 7.7e-56 221.9 319 40.8
Carub.0005s0168 Capsella rubella HOM05D005118 ORTHO05D006038 2.2e-55 220.3 297 41.8
SMO118G0036 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 5.0e-55 219.2 300 42.0
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 6.5e-55 218.8 320 39.4
Nitab4.5_0001933g0040 Nicotiana tabacum HOM05D005118 ORTHO05D006038 1.1e-54 218.0 322 37.9
HPP92_018124 Vanilla planifolia HOM05D005118 ORTHO05D006038 4.2e-54 216.1 300 41.0
Lj6g0005905 Lotus japonicus HOM05D005118 ORTHO05D006038 7.2e-54 215.3 273 44.0
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 9.4e-54 214.9 282 42.2
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 4.7e-53 212.6 217 52.5
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 1.0e-52 211.5 262 42.7
AT2G02765 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 2.6e-51 206.8 206 52.4
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 4.4e-51 206.1 278 41.7
BcaC05g29371 Brassica carinata HOM05D005118 ORTHO05D006038 2.8e-50 203.4 285 42.1
Sp3g13570 Schrenkiella parvula HOM05D005118 ORTHO05D006038 1.8e-49 200.7 307 39.7
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 4.1e-49 199.5 367 34.3
Rhsim03G0074200 Rhododendron simsii HOM05D005118 ORTHO05D006038 2.0e-48 197.2 331 38.1
Thhalv10021266m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 7.7e-48 195.3 307 38.4
BolC5t33871H Brassica oleracea HOM05D005118 ORTHO05D006038 3.8e-47 193.0 309 39.8
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 1.1e-46 191.4 234 43.2
PGR004G0063 Punica granatum HOM05D005118 ORTHO05D006038 2.3e-44 183.7 317 36.9
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 1.2e-43 181.4 237 39.7
Hund01804 Selenicereus undatus HOM05D005118 ORTHO05D006038 2.0e-43 180.6 317 34.1
AUR62017509 Chenopodium quinoa HOM05D005118 ORTHO05D006038 9.8e-43 178.3 323 34.1
Cc06_g05990 Coffea canephora HOM05D005118 ORTHO05D006038 9.8e-43 178.3 233 41.2
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 9.8e-43 178.3 237 40.5
BraA05t22230Z Brassica rapa HOM05D005118 ORTHO05D006038 2.2e-42 177.2 189 49.7
Haze_12101 Corylus avellana HOM05D005118 ORTHO05D006038 1.4e-41 174.5 294 36.1
C05p51840 Brassica napus HOM05D005118 ORTHO05D006038 1.8e-41 174.1 308 38.3
Ah.08g210500 Amaranthus hybridus HOM05D000892 ORTHO05D009371 2.4e-41 173.7 314 33.4
Peaxi162Scf00096g00416 Petunia axillaris HOM05D005118 ORTHO05D006038 2.4e-41 173.7 298 34.9
Rhsim03G0072000 Rhododendron simsii HOM05D005118 ORTHO05D006038 5.4e-41 172.6 231 42.0
Nitab4.5_0012129g0010 Nicotiana tabacum HOM05D005118 ORTHO05D006038 5.9e-40 169.1 324 33.6
Dinv21192 Davidia involucrata HOM05D005118 ORTHO05D006038 5.0e-39 166.0 254 40.6
Manes.08G026600 Manihot esculenta HOM05D005118 ORTHO05D006038 1.8e-36 157.5 316 33.2
AL5G11970 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 3.0e-36 156.8 195 43.1
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 4.0e-36 156.4 176 47.2
HPP92_018147 Vanilla planifolia HOM05D005118 ORTHO05D006038 4.0e-36 156.4 230 37.8
BcaB06g29561 Brassica carinata HOM05D005118 ORTHO05D006038 9.8e-35 151.8 309 34.0
VMungo0720G0644 Vigna mungo HOM05D005118 ORTHO05D006038 9.1e-33 145.2 147 52.4
Cpa.g.sc5.3 Carica papaya HOM05D005118 ORTHO05D006038 4.0e-28 129.8 174 45.4
PGSC0003DMG402008870 Solanum tuberosum HOM05D005118 ORTHO05D006038 4.4e-27 126.3 148 45.9
VMungo0720G2492 Vigna mungo HOM05D005118 ORTHO05D006038 4.4e-27 126.3 186 40.3
Sabra06G0126100 Salix brachista HOM05D005118 ORTHO05D006038 3.5e-24 116.7 254 33.9
PRCOL_00003909 Prasinoderma coloniale HOM05D005118 ORTHO05D006038 1.3e-23 114.8 213 35.2
BcaC05g28982 Brassica carinata HOM05D005118 ORTHO05D006038 5.0e-23 112.8 284 32.0
MD14G1027400 Malus domestica HOM05D005118 ORTHO05D006038 1.9e-22 110.9 167 40.7
FvH4_4g11630 Fragaria vesca HOM05D005118 ORTHO05D006038 9.5e-22 108.6 111 51.4
FAN12G1659 Fragaria x ananassa HOM05D005118 ORTHO05D006038 3.6e-21 106.7 124 46.8
MCO02G431 Micromonas commoda HOM05D005118 ORTHO05D006038 7.5e-19 99.0 368 25.8
CBR_g30340 Chara braunii HOM05D005118 ORTHO05D006038 1.3e-18 98.2 215 32.1
A05p34090 Brassica napus HOM05D005118 ORTHO05D006038 1.0e-15 88.6 90 48.9
Glyma.10G074300 Glycine max HOM05D005118 ORTHO05D006038 5.2e-12 76.3 97 39.2
CDE02G4411 Ceratophyllum demersum HOM05D000588 ORTHO05D000637 8.9e-12 75.5 126 34.1
Cre01.g018500 Chlamydomonas reinhardtii HOM05D005118 ORTHO05D006038 3.7e-10 70.1 165 33.3
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 3.5e-08 63.5 256 24.2
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 1.3e-07 61.6 223 26.0
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 1.3e-07 61.6 254 23.2
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.7e-07 61.2 329 22.2
CARHR086010 Cardamine hirsuta HOM05D005118 ORTHO05D006038 5.1e-07 59.7 134 31.3
AUR62015050 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.1e-07 59.7 111 30.6
BcaB06g25617 Brassica carinata HOM05D005118 ORTHO05D006038 1.1e-06 58.5 49 53.1
BcaB06g25618 Brassica carinata HOM05D005118 ORTHO05D006038 1.1e-06 58.5 49 53.1
Ah.16g107780 Amaranthus hybridus HOM05D005118 ORTHO05D006038 1.5e-06 58.2 84 39.3
TPR.G14778 Trifolium pratense HOM05D005118 ORTHO05D006038 1.5e-06 58.2 122 30.3
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 1.9e-06 57.8 327 21.7
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 1.9e-06 57.8 327 21.7
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 4.3e-06 56.6 246 24.0


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