Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18114 Sequoiadendron giganteum HOM05D007686 ORTHO05D009709 3.3e-91 340.1 572 100.0
MBI17_g12881_MAGBIO Magnolia biondii HOM05D007686 ORTHO05D009709 1.1e-19 102.4 96 45.8
TAR383G0079 Trochodendron aralioides HOM05D007686 ORTHO05D009709 1.5e-19 102.1 96 51.0
Aqoxy2G03020 Aquilegia oxysepala HOM05D007686 ORTHO05D009709 5.9e-16 90.1 96 40.6
PSO724G0460 Papaver somniferum HOM05D007686 ORTHO05D009709 5.9e-16 90.1 96 40.6
PSO135G0590 Papaver somniferum HOM05D007686 ORTHO05D009709 7.7e-16 89.7 96 39.6
Zm00001eb331140 Zea mays HOM05D007686 ORTHO05D009709 3.2e-14 84.3 96 43.8
Os07g0688100 Oryza sativa ssp. japonica HOM05D007686 ORTHO05D009709 1.0e-12 79.3 96 40.6
ATR0006G044 Amborella trichopoda HOM05D004079 ORTHO05D009709 5.7e-11 73.6 67 47.8
Gohir.D02G157000 Gossypium hirsutum HOM05D007686 ORTHO05D009709 4.5e-08 63.9 59 50.8
Pp3c5_26320 Physcomitrium patens HOM05D000424 ORTHO05D000355 4.5e-08 63.9 97 33.0
CDE05G1633 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 1.3e-07 62.4 60 43.3
Lsat_1_v5_gn_8_152860 Lactuca sativa HOM05D007686 ORTHO05D009709 5.0e-07 60.5 57 54.4
CARHR007530 Cardamine hirsuta HOM05D004271 ORTHO05D006011 6.5e-07 60.1 73 38.4
PGR119G1810 Punica granatum HOM05D007686 ORTHO05D009709 6.5e-07 60.1 40 62.5
Sp1g06450 Schrenkiella parvula HOM05D004271 ORTHO05D006011 8.5e-07 59.7 73 37.0
HanXRQChr08g0208401 Helianthus annuus HOM05D007686 ORTHO05D009709 1.1e-06 59.3 53 54.7
Manes.13G021400 Manihot esculenta HOM05D007686 ORTHO05D009709 1.1e-06 59.3 59 47.5
Eucgr.H02473 Eucalyptus grandis HOM05D007686 ORTHO05D009709 1.5e-06 58.9 58 51.7
AL1G17960 Arabidopsis lyrata HOM05D004271 ORTHO05D002107 1.9e-06 58.5 73 35.6
Carub.0011s0004 Capsella rubella HOM05D004271 ORTHO05D006011 1.9e-06 58.5 73 37.0
Manes.13G022000 Manihot esculenta HOM05D007686 ORTHO05D009709 1.9e-06 58.5 59 45.8
BcaC05g25091 Brassica carinata HOM05D007686 ORTHO05D009709 3.2e-06 57.8 58 46.6
Manes.04G002700 Manihot esculenta HOM05D000424 ORTHO05D000355 3.2e-06 57.8 97 32.0
TWI36G0128 Tripterygium wilfordii HOM05D007686 ORTHO05D009709 4.2e-06 57.4 59 50.8
ATR0827G081 Amborella trichopoda HOM05D007173 ORTHO05D009151 5.5e-06 57.0 81 39.5
DCAR_017698 Daucus carota HOM05D006740 ORTHO05D008571 7.2e-06 56.6 79 31.6
ATR0907G005 Amborella trichopoda HOM05D007661 ORTHO05D009671 9.4e-06 56.2 84 27.4
AT1G07740 Arabidopsis thaliana HOM05D004271 ORTHO05D002107 9.4e-06 56.2 73 37.0
CANSAT64G0911 Cannabis sativa HOM05D006740 ORTHO05D008571 9.4e-06 56.2 79 32.9
Thhalv10009298m.g Eutrema salsugineum HOM05D004271 ORTHO05D006011 9.4e-06 56.2 73 37.0
SEGI_34039 Sequoiadendron giganteum HOM05D000424 ORTHO05D000355 9.4e-06 56.2 97 33.0


User provided reference genes

Program Settings