Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 4.0e-182 641.3 335 100.0
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.4e-70 270.8 243 60.9
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 5.4e-70 268.9 243 56.4
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 5.4e-70 268.9 243 56.8
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 2.4e-65 253.4 247 52.2
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 2.4e-65 253.4 245 55.1
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 8.9e-65 251.5 244 54.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.2e-64 251.1 246 53.7
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.2e-64 251.1 244 54.5
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 5.8e-64 248.8 248 53.6
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 5.8e-64 248.8 206 63.1
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 7.6e-64 248.4 248 52.0
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 7.6e-64 248.4 252 52.8
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 9.9e-64 248.1 314 47.8
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 9.9e-64 248.1 248 53.2
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 3.8e-63 246.1 242 52.5
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 4.9e-63 245.7 247 52.2
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 4.9e-63 245.7 244 54.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 8.4e-63 245.0 247 51.4
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 1.4e-62 244.2 271 49.1
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.4e-62 244.2 248 54.4
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 2.4e-62 243.4 248 52.0
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 4.1e-62 242.7 248 52.8
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 5.4e-62 242.3 248 52.8
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 5.4e-62 242.3 248 52.0
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 7.1e-62 241.9 248 52.4
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 9.2e-62 241.5 275 49.1
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.6e-61 240.7 244 52.0
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 4.6e-61 239.2 248 52.0
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 7.8e-61 238.4 248 52.4
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 7.8e-61 238.4 338 45.0
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 2.3e-60 236.9 248 52.0
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 2.3e-60 236.9 248 52.0
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.3e-60 236.9 241 52.7
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 3.9e-60 236.1 248 52.0
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 3.9e-60 236.1 262 51.1
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 8.7e-60 235.0 245 51.4
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 8.7e-60 235.0 245 51.0
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 8.7e-60 235.0 241 51.9
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.1e-59 234.6 245 51.4
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 7.3e-59 231.9 248 53.2
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.2e-58 231.1 241 52.7
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 1.2e-58 231.1 241 52.7
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 1.8e-57 227.3 242 52.1
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.8e-57 227.3 233 51.5
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 2.4e-57 226.9 248 51.2
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 3.1e-57 226.5 274 48.9
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 5.2e-57 225.7 197 59.9
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 9.0e-57 224.9 245 51.8
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 2.6e-56 223.4 264 47.7
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 4.2e-54 216.1 242 50.0
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 2.5e-51 206.8 253 46.6
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 5.6e-51 205.7 208 50.5
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 5.6e-51 205.7 242 47.9
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 7.3e-51 205.3 214 50.5
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 2.1e-50 203.8 248 46.8
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 2.6e-48 196.8 205 51.7
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 5.8e-48 195.7 230 49.6
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 1.3e-47 194.5 214 51.4
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 1.7e-47 194.1 209 50.2
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.4e-46 191.0 205 51.7
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 2.0e-40 170.6 209 46.4
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 9.3e-38 161.8 147 54.4
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 7.4e-35 152.1 237 38.4
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 1.2e-32 144.8 245 40.0
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 4.3e-27 126.3 93 65.6
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 4.8e-26 122.9 99 65.7
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 1.5e-24 117.9 104 57.7
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 9.4e-22 108.6 90 63.3
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 6.3e-18 95.9 101 50.5
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 8.2e-18 95.5 121 47.1
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 5.3e-17 92.8 86 57.0
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 5.0e-15 86.3 77 58.4
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 7.2e-14 82.4 338 25.1
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 6.7e-12 75.9 311 26.7
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 5.5e-06 56.2 146 28.1


User provided reference genes

Program Settings