Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 3.7e-88 328.2 165 100.0
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.4e-26 123.6 85 68.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 4.0e-26 122.1 85 67.1
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 4.0e-26 122.1 85 65.9
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 5.3e-26 121.7 85 67.1
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.5e-25 120.2 93 58.1
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 2.0e-25 119.8 93 60.2
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.0e-25 119.8 93 59.1
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 2.6e-25 119.4 93 59.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.6e-25 119.4 96 55.2
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 3.4e-25 119.0 112 54.5
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 4.5e-25 118.6 85 64.7
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 5.8e-25 118.2 109 53.2
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 5.8e-25 118.2 85 63.5
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 7.6e-25 117.9 86 65.1
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 7.6e-25 117.9 93 61.3
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 7.6e-25 117.9 85 65.9
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 9.9e-25 117.5 86 62.8
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 9.9e-25 117.5 85 63.5
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 1.3e-24 117.1 85 63.5
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 1.3e-24 117.1 85 61.2
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 1.7e-24 116.7 93 58.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.7e-24 116.7 85 63.5
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 1.7e-24 116.7 93 58.1
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 1.7e-24 116.7 85 62.4
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 1.7e-24 116.7 85 61.2
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.7e-24 116.7 85 61.2
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.7e-24 116.7 90 58.9
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.2e-24 116.3 93 58.1
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.2e-24 116.3 135 45.9
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 2.9e-24 115.9 93 59.1
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.9e-24 115.9 140 46.4
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.8e-24 115.5 135 45.9
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 3.8e-24 115.5 135 45.9
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.9e-24 115.2 95 60.0
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.9e-24 115.2 95 60.0
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 4.9e-24 115.2 120 49.2
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 4.9e-24 115.2 85 62.4
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 4.9e-24 115.2 131 47.3
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 4.9e-24 115.2 93 55.9
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 6.4e-24 114.8 134 47.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 6.4e-24 114.8 85 62.4
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 6.4e-24 114.8 111 55.0
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 6.4e-24 114.8 145 44.8
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 8.4e-24 114.4 135 45.2
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 8.4e-24 114.4 85 61.2
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.4e-24 114.4 85 61.2
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 8.4e-24 114.4 85 63.5
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.1e-23 114.0 94 60.6
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.1e-23 114.0 85 63.5
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.1e-23 114.0 93 55.9
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.4e-23 113.6 86 60.5
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-23 113.2 89 59.6
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.9e-23 113.2 85 62.4
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.9e-23 113.2 85 62.4
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 2.4e-23 112.8 94 55.3
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 2.4e-23 112.8 85 62.4
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 2.4e-23 112.8 98 54.1
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 2.4e-23 112.8 85 60.0
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 2.4e-23 112.8 129 48.1
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 2.4e-23 112.8 85 60.0
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 3.2e-23 112.5 85 60.0
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.2e-23 112.5 93 58.1
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 4.2e-23 112.1 116 50.0
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.2e-23 112.1 85 60.0
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 4.2e-23 112.1 85 58.8
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 4.2e-23 112.1 102 52.9
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 5.4e-23 111.7 88 61.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.1e-23 111.3 113 52.2
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 9.3e-23 110.9 96 57.3
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 9.3e-23 110.9 85 61.2
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 9.3e-23 110.9 85 58.8
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 9.3e-23 110.9 125 48.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.2e-22 110.5 145 40.7
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.6e-22 110.2 85 60.0
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 3.5e-22 109.0 135 41.5
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 3.5e-22 109.0 135 41.5
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 6.0e-22 108.2 79 60.8
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 6.0e-22 108.2 79 60.8
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 6.0e-22 108.2 79 60.8
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 6.0e-22 108.2 79 60.8
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 6.0e-22 108.2 85 60.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 7.9e-22 107.8 85 58.8
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 7.9e-22 107.8 126 47.6
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 7.9e-22 107.8 126 47.6
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 1.0e-21 107.5 162 41.4
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.0e-21 107.5 85 60.0
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 1.3e-21 107.1 79 60.8
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-21 107.1 79 59.5
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.3e-21 107.1 142 41.5
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 1.3e-21 107.1 90 56.7
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 2.3e-21 106.3 127 47.2
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 3.0e-21 105.9 79 60.8
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 3.0e-21 105.9 79 60.8
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 3.0e-21 105.9 90 54.4
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 5.1e-21 105.1 79 60.8
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 5.1e-21 105.1 79 59.5
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 8.7e-21 104.4 79 59.5
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.9e-20 103.2 106 50.0
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 4.3e-20 102.1 79 57.0
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 5.6e-20 101.7 136 39.0
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 2.8e-19 99.4 99 50.5
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.8e-18 96.7 106 45.3
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 1.8e-18 96.7 107 45.8
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 6.9e-18 94.7 67 64.2
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.8e-16 89.0 64 64.1
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.4e-16 88.2 59 71.2
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 4.2e-15 85.5 55 67.3
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.5e-12 77.0 134 39.6
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.8e-11 72.8 93 44.1
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 4.8e-11 72.0 56 55.4
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.2e-09 67.4 83 44.6


User provided reference genes

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