Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 4.0e-164 581.3 273 100.0
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.4e-100 369.4 172 100.0
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.0e-58 231.1 153 67.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 6.6e-58 228.4 164 64.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.1e-57 227.6 173 61.8
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.5e-57 226.5 157 67.5
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 5.6e-57 225.3 154 65.6
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 5.6e-57 225.3 152 67.8
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.5e-57 224.6 154 65.6
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 9.5e-57 224.6 154 64.9
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 9.5e-57 224.6 151 64.9
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 9.5e-57 224.6 153 64.7
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.6e-56 223.8 151 67.5
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.1e-56 223.4 155 63.9
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.1e-56 223.4 149 66.4
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 2.1e-56 223.4 152 69.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 2.8e-56 223.0 151 67.5
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.2e-56 221.9 166 65.7
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 8.1e-56 221.5 152 67.8
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.1e-55 221.1 154 64.9
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.3e-55 219.9 153 65.4
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 2.3e-55 219.9 153 68.6
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 2.3e-55 219.9 153 65.4
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 3.1e-55 219.5 162 63.0
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 3.1e-55 219.5 152 65.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 3.1e-55 219.5 152 65.8
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 3.1e-55 219.5 151 64.9
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 5.2e-55 218.8 151 65.6
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 5.2e-55 218.8 151 66.9
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 6.8e-55 218.4 153 64.7
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 6.8e-55 218.4 152 67.8
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 6.8e-55 218.4 152 65.8
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.2e-54 217.6 152 64.5
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 1.5e-54 217.2 152 64.5
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.6e-54 216.5 151 64.2
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 2.6e-54 216.5 151 64.9
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.4e-54 216.1 158 65.8
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 9.9e-54 214.5 152 64.5
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.3e-53 214.2 153 65.4
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 2.2e-53 213.4 151 64.2
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 2.9e-53 213.0 152 65.8
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 2.9e-53 213.0 152 65.8
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 2.9e-53 213.0 165 60.6
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 3.7e-53 212.6 151 63.6
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 3.7e-53 212.6 152 65.1
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 3.7e-53 212.6 151 62.3
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 3.7e-53 212.6 152 65.1
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 4.9e-53 212.2 152 64.5
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 4.9e-53 212.2 153 65.4
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 4.9e-53 212.2 153 67.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 4.9e-53 212.2 153 67.3
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 4.9e-53 212.2 153 67.3
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 6.4e-53 211.8 172 57.6
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 8.3e-53 211.5 152 64.5
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 8.3e-53 211.5 157 62.4
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.4e-52 210.7 152 65.1
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.4e-52 210.7 155 63.9
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.9e-52 210.3 154 63.6
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 2.4e-52 209.9 151 62.9
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 2.4e-52 209.9 152 65.1
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 3.2e-52 209.5 151 62.9
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 3.2e-52 209.5 155 63.9
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 4.1e-52 209.1 153 62.7
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 4.1e-52 209.1 152 61.8
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 5.4e-52 208.8 151 60.9
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 7.1e-52 208.4 160 60.6
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 7.1e-52 208.4 152 64.5
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 9.2e-52 208.0 152 64.5
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 9.2e-52 208.0 152 63.8
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 9.2e-52 208.0 152 63.8
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.2e-51 207.6 178 57.3
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.2e-51 207.6 152 63.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.6e-51 207.2 154 61.7
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 2.7e-51 206.5 151 62.3
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 3.5e-51 206.1 151 62.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 7.8e-51 204.9 153 59.5
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 1.3e-50 204.1 161 62.1
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 1.3e-50 204.1 178 57.3
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.3e-50 203.4 152 63.2
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.3e-50 203.4 171 56.7
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 6.6e-50 201.8 152 60.5
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 6.6e-50 201.8 154 62.3
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.5e-49 199.9 143 61.5
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.6e-49 198.7 152 62.5
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 2.8e-48 196.4 150 61.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.1e-47 194.5 196 49.5
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.8e-47 193.7 187 51.9
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 6.8e-47 191.8 120 67.5
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 8.1e-40 168.3 121 64.5
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 2.4e-39 166.8 154 55.2
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.1e-36 157.9 92 72.8
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 4.6e-35 152.5 113 60.2
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 8.7e-26 121.7 70 78.6
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.5e-25 120.9 67 79.1
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.3e-24 117.9 67 76.1
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.3e-24 117.9 70 74.3
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 3.7e-24 116.3 68 73.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.8e-24 115.9 85 64.7
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.1e-23 114.8 177 38.4
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 1.7e-21 107.5 86 60.5
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.9e-21 106.7 87 59.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.9e-21 106.7 100 52.0
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 1.8e-18 97.4 85 54.1
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 4.8e-16 89.4 139 36.0
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.9e-13 80.1 97 41.2
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 8.4e-13 78.6 48 62.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 5.5e-12 75.9 54 59.3
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 3.5e-11 73.2 38 76.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.5e-11 73.2 44 65.9
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 3.5e-11 73.2 50 70.0
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 3.5e-11 73.2 43 65.1
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 4.1e-07 59.7 55 47.3


User provided reference genes

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