Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18021 Sequoiadendron giganteum HOM05D005365 ORTHO05D006910 1.5e-192 676.0 344 100.0
ATR0753G168 Amborella trichopoda HOM05D005365 ORTHO05D006910 7.9e-109 397.9 324 61.1
TAR374G0610 Trochodendron aralioides HOM05D005365 ORTHO05D006910 3.1e-105 386.0 318 58.8
Nn4g24353 Nelumbo nucifera HOM05D005365 ORTHO05D006910 4.5e-104 382.1 316 60.4
PSO478G2448 Papaver somniferum HOM05D005365 ORTHO05D006910 1.0e-103 380.9 322 61.2
Haze_14277 Corylus avellana HOM05D005365 ORTHO05D006910 1.7e-103 380.2 339 56.6
PSO017G3744 Papaver somniferum HOM05D005365 ORTHO05D006910 2.2e-103 379.8 321 61.7
Cfa007794 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.9e-102 376.7 318 57.9
Lj2C520T1 Lonicera japonica HOM05D005365 ORTHO05D006910 3.9e-100 369.0 316 58.2
Dinv28185 Davidia involucrata HOM05D005365 ORTHO05D006910 1.1e-99 367.5 315 59.0
Dinv19044 Davidia involucrata HOM05D005365 ORTHO05D006910 2.0e-99 366.7 315 59.0
CDE05G1264 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 5.7e-99 365.2 315 57.5
Aqoxy2G03929 Aquilegia oxysepala HOM05D005365 ORTHO05D006910 6.3e-98 361.7 317 57.4
CiPaw.03G073200 Carya illinoinensis HOM05D005365 ORTHO05D006910 1.7e-95 353.6 310 55.8
GSVIVG01014028001 Vitis vinifera HOM05D005365 ORTHO05D006910 6.5e-95 351.7 317 57.4
Nitab4.5_0000201g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 8.5e-95 351.3 317 56.5
CSS0031268 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 1.9e-94 350.1 302 58.6
Lalb_Chr15g0084951 Lupinus albus HOM05D005365 ORTHO05D006910 1.9e-94 350.1 320 55.3
CANSAT80G2352 Cannabis sativa HOM05D005365 ORTHO05D006910 4.2e-94 349.0 316 54.4
Actinidia06487 Actinidia chinensis HOM05D005365 ORTHO05D006910 7.2e-94 348.2 315 54.6
Nitab4.5_0012785g0010 Nicotiana tabacum HOM05D005365 ORTHO05D006910 1.2e-93 347.4 317 55.2
Sopen11g006160 Solanum pennellii HOM05D005365 ORTHO05D006910 1.2e-93 347.4 318 53.8
Duzib133G0311 Durio zibethinus HOM05D005365 ORTHO05D006910 1.6e-93 347.1 320 55.3
Solyc11g011370.2 Solanum lycopersicum HOM05D005365 ORTHO05D006910 2.1e-93 346.7 318 53.8
Thecc.04G055200 Theobroma cacao HOM05D005365 ORTHO05D006910 2.1e-93 346.7 320 55.6
Rhsim10G0178300 Rhododendron simsii HOM05D005365 ORTHO05D006910 2.7e-93 346.3 320 55.6
Eucgr.F02871 Eucalyptus grandis HOM05D005365 ORTHO05D006910 3.6e-93 345.9 318 56.3
CSS0046739 Camellia sinensis var. sinensis HOM05D005365 ORTHO05D006910 4.7e-93 345.5 302 57.6
QL02p059099 Quercus lobata HOM05D005365 ORTHO05D006910 6.1e-93 345.1 339 53.4
Gohir.D11G174900 Gossypium hirsutum HOM05D005365 ORTHO05D006910 8.0e-93 344.7 320 54.4
Gorai.007G187500 Gossypium raimondii HOM05D005365 ORTHO05D006910 8.0e-93 344.7 320 54.4
Prupe.3G017700 Prunus persica HOM05D005365 ORTHO05D006910 8.0e-93 344.7 316 54.7
ECA238G2923 Erigeron canadensis HOM05D005365 ORTHO05D006910 2.3e-92 343.2 316 53.8
RcHm_v2.0_Chr3g0491161 Rosa chinensis HOM05D005365 ORTHO05D006910 2.3e-92 343.2 316 57.3
Gohir.A11G168700 Gossypium hirsutum HOM05D005365 ORTHO05D006910 3.0e-92 342.8 320 54.1
COL.COLO4_13431 Corchorus olitorius HOM05D005365 ORTHO05D006910 5.2e-92 342.0 320 53.4
ClCG03G008820 Citrullus lanatus HOM05D005365 ORTHO05D006910 6.7e-92 341.7 342 51.8
Lj6g0003323 Lotus japonicus HOM05D005365 ORTHO05D006910 6.7e-92 341.7 318 54.1
Glyma.18G041000 Glycine max HOM05D005365 ORTHO05D006910 8.8e-92 341.3 318 55.7
Lsat_1_v5_gn_2_68700 Lactuca sativa HOM05D005365 ORTHO05D006910 8.8e-92 341.3 317 53.6
Ca_17092_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.5e-91 340.5 318 54.4
Ca_17099_v3 Cicer arietinum L. HOM05D005365 ORTHO05D006910 1.5e-91 340.5 318 54.4
Ciclev10010965m.g Citrus clementina HOM05D005365 ORTHO05D006910 2.0e-91 340.1 318 55.0
Glyma.11G215600 Glycine max HOM05D005365 ORTHO05D006910 2.0e-91 340.1 318 55.0
TWI77G0914 Tripterygium wilfordii HOM05D005365 ORTHO05D006910 2.0e-91 340.1 318 55.0
CsaV3_5G023940 Cucumis sativus L. HOM05D005365 ORTHO05D006910 2.6e-91 339.7 321 54.5
MELO3C022831.2 Cucumis melo HOM05D005365 ORTHO05D006910 4.4e-91 339.0 340 52.1
FAN23G0266 Fragaria x ananassa HOM05D005365 ORTHO05D006910 4.4e-91 339.0 316 56.6
MD17G1268900 Malus domestica HOM05D005365 ORTHO05D006910 4.4e-91 339.0 317 55.2
Manes.03G027200 Manihot esculenta HOM05D005365 ORTHO05D006910 4.4e-91 339.0 343 51.0
Sed0006074 Sechium edule HOM05D005365 ORTHO05D006910 4.4e-91 339.0 342 52.6
vmacro07709 Vaccinium macrocarpon HOM05D005365 ORTHO05D006910 4.4e-91 339.0 319 55.8
MD09G1270700 Malus domestica HOM05D005365 ORTHO05D006910 5.7e-91 338.6 318 54.1
Phvul.001G229600 Phaseolus vulgaris HOM05D005365 ORTHO05D006910 7.5e-91 338.2 318 55.0
VMungo1383G2900 Vigna mungo HOM05D005365 ORTHO05D006910 7.5e-91 338.2 315 55.9
CAN.G222.54 Capsicum annuum HOM05D005365 ORTHO05D006910 1.3e-90 337.4 318 54.1
Cpa.g.sc116.71 Carica papaya HOM05D005365 ORTHO05D006910 2.8e-90 336.3 317 53.0
FvH4_1g30230 Fragaria vesca HOM05D005365 ORTHO05D006910 2.8e-90 336.3 313 56.9
FAN19G1822 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.8e-90 336.3 313 56.5
FAN26G1336 Fragaria x ananassa HOM05D005365 ORTHO05D006910 2.8e-90 336.3 318 56.3
AT5G37630 Arabidopsis thaliana HOM05D005365 ORTHO05D006910 6.3e-90 335.1 331 52.9
MSTRG.15661 Avicennia marina HOM05D005365 ORTHO05D006910 6.3e-90 335.1 317 55.8
Hma1.2p1_1583F.1_g291990 Hydrangea macrophylla HOM05D005365 ORTHO05D006910 1.4e-89 334.0 294 58.2
Migut.K00918 Erythranthe guttata HOM05D005365 ORTHO05D006910 2.4e-89 333.2 316 55.7
arahy.Tifrunner.gnm1.ann1.MH7SY7 Arachis hypogaea HOM05D005365 ORTHO05D006910 3.1e-89 332.8 339 52.8
AL7G46400 Arabidopsis lyrata HOM05D005365 ORTHO05D006910 5.3e-89 332.0 327 53.2
arahy.Tifrunner.gnm1.ann1.WJY350 Arachis hypogaea HOM05D005365 ORTHO05D006910 5.3e-89 332.0 339 53.1
Sp7g04480 Schrenkiella parvula HOM05D005365 ORTHO05D006910 7.0e-89 331.6 328 52.7
A04p10780 Brassica napus HOM05D005365 ORTHO05D006910 1.2e-88 330.9 322 53.7
BraA04t16742Z Brassica rapa HOM05D005365 ORTHO05D006910 1.2e-88 330.9 322 53.7
Psat5g120520 Pisum sativum HOM05D005365 ORTHO05D006910 1.2e-88 330.9 340 51.2
Carub.0007s3279 Capsella rubella HOM05D005365 ORTHO05D006910 1.6e-88 330.5 336 52.1
Sc11g0004580 Simmondsia chinensis HOM05D005365 ORTHO05D006910 2.0e-88 330.1 315 54.6
THA.LOC104805627 Tarenaya hassleriana HOM05D005365 ORTHO05D006910 2.0e-88 330.1 324 54.0
Mapoly0032s0119 Marchantia polymorpha HOM05D005365 ORTHO05D006910 5.9e-88 328.6 342 50.9
CARHR215230 Cardamine hirsuta HOM05D005365 ORTHO05D006910 7.7e-88 328.2 328 53.0
Potri.004G085500 Populus trichocarpa HOM05D005365 ORTHO05D006910 7.7e-88 328.2 326 53.4
EL10Ac2g03189 Beta vulgaris HOM05D005365 ORTHO05D006910 2.2e-87 326.6 310 54.5
Sabra04G0056600 Salix brachista HOM05D005365 ORTHO05D006910 2.2e-87 326.6 326 52.1
HPP92_006138 Vanilla planifolia HOM05D005365 ORTHO05D006910 2.9e-87 326.2 315 53.0
Zm00001eb379890 Zea mays HOM05D005365 ORTHO05D006910 3.8e-87 325.9 317 51.4
BcaC02g09592 Brassica carinata HOM05D005365 ORTHO05D006910 8.5e-87 324.7 329 52.3
BolC4t26020H Brassica oleracea HOM05D005365 ORTHO05D006910 8.5e-87 324.7 329 52.3
Pp3c22_14670 Physcomitrium patens HOM05D005365 ORTHO05D006910 1.5e-86 323.9 319 52.4
Atru.chr1.1986 Acer truncatum HOM05D005365 ORTHO05D006910 1.9e-86 323.6 316 52.2
C04p44500 Brassica napus HOM05D005365 ORTHO05D006910 1.9e-86 323.6 329 51.7
AUR62018225 Chenopodium quinoa HOM05D005365 ORTHO05D006910 2.5e-86 323.2 327 52.3
AUR62037789 Chenopodium quinoa HOM05D005365 ORTHO05D006910 4.2e-86 322.4 312 53.5
MBI19_g22067_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 4.2e-86 322.4 278 60.1
Cc07_g13300 Coffea canephora HOM05D005365 ORTHO05D006910 5.5e-86 322.0 319 53.0
Thhalv10027629m.g Eutrema salsugineum HOM05D005365 ORTHO05D006910 7.2e-86 321.6 328 52.1
BcaB06g27110 Brassica carinata HOM05D005365 ORTHO05D006910 9.4e-86 321.2 326 52.5
Hund13093 Selenicereus undatus HOM05D005365 ORTHO05D006910 9.4e-86 321.2 308 53.2
Ah.10g032430 Amaranthus hybridus HOM05D005365 ORTHO05D006910 1.2e-85 320.9 316 54.4
Aa31LG9G17470 Aethionema arabicum HOM05D005365 ORTHO05D006910 2.1e-85 320.1 328 52.4
DCAR_028454 Daucus carota HOM05D005365 ORTHO05D006910 1.8e-84 317.0 317 53.3
SGA_v2.0_scaffold45G17160 Striga asiatica HOM05D005365 ORTHO05D006910 1.8e-84 317.0 355 49.3
PGR004G1341 Punica granatum HOM05D005365 ORTHO05D006910 3.0e-84 316.2 334 49.4
Medtr3g065300 Medicago truncatula HOM05D005365 ORTHO05D006910 2.6e-83 313.2 340 50.6
unitig_0.g2645 Utricularia gibba HOM05D005365 ORTHO05D006910 5.5e-78 295.4 318 50.3
Peaxi162Scf00562g00038 Petunia axillaris HOM05D005365 ORTHO05D006910 2.0e-75 287.0 318 48.1
CBR_g39392 Chara braunii HOM05D000019 ORTHO05D000048 6.3e-74 282.0 316 44.6
GSVIVG01038362001 Vitis vinifera HOM05D005365 ORTHO05D006910 1.2e-72 277.7 212 64.6
SMO367G0263 Selaginella moellendorffii HOM05D005365 ORTHO05D006910 1.5e-70 270.8 326 46.6
CDE05G3412 Ceratophyllum demersum HOM05D005365 ORTHO05D006910 1.4e-68 264.2 204 61.8
AagrBONN_evm.TU.Sc2ySwM_228.4009 Anthoceros agrestis HOM05D005365 ORTHO05D006910 1.2e-67 261.2 307 47.2
Oeu012494.1 Olea europaea HOM05D005365 ORTHO05D006910 6.8e-60 235.3 226 51.3
MBI19_g43231_MAGBIO Magnolia biondii HOM05D005365 ORTHO05D006910 4.4e-51 206.1 181 60.8
MCO13G329 Micromonas commoda HOM05D005365 ORTHO05D006910 3.0e-47 193.4 303 35.3
PRCOL_00005851 Prasinoderma coloniale HOM05D005365 ORTHO05D006910 1.1e-44 184.9 304 35.5
TPR.G24911 Trifolium pratense HOM05D005365 ORTHO05D006910 5.8e-43 179.1 136 65.4
GSVIVG01030692001 Vitis vinifera HOM05D005365 ORTHO05D006910 4.7e-37 159.5 137 62.0
SGA_v2.0_scaffold45G17196 Striga asiatica HOM05D005365 ORTHO05D006910 6.0e-32 142.5 105 70.5
Oeu012492.1 Olea europaea HOM05D005365 ORTHO05D006910 8.4e-26 122.1 94 60.6
Cfa023924 Carpinus fangiana HOM05D005365 ORTHO05D006910 1.0e-15 88.6 279 27.6
Gorai.005G096400 Gossypium raimondii HOM05D005365 ORTHO05D015145 5.3e-12 76.3 65 52.3
Gohir.D04G112220 Gossypium hirsutum HOM05D005365 ORTHO05D006910 2.0e-11 74.3 68 50.0
TPR.G7041 Trifolium pratense HOM05D005365 ORTHO05D006910 1.3e-07 61.6 52 53.8


User provided reference genes

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