Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.7e-105 386.0 186 100.0
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.2e-29 134.0 132 50.0
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 4.4e-29 132.1 143 46.2
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 4.4e-29 132.1 121 52.1
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 8.3e-28 127.9 111 54.1
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.8e-27 126.7 127 49.6
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 2.4e-27 126.3 111 53.2
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.4e-27 125.2 129 50.4
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 9.1e-27 124.4 133 46.6
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 1.6e-26 123.6 120 48.3
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.0e-26 123.2 111 52.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 2.0e-26 123.2 111 51.4
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 2.7e-26 122.9 122 49.2
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 3.5e-26 122.5 129 49.6
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.5e-26 122.5 129 49.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 3.5e-26 122.5 129 48.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 3.5e-26 122.5 128 49.2
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 4.5e-26 122.1 140 42.1
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 5.9e-26 121.7 123 48.0
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 5.9e-26 121.7 120 50.8
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 1.0e-25 120.9 129 48.8
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.0e-25 120.9 123 47.2
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.3e-25 120.6 127 48.8
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.7e-25 120.2 116 50.9
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 2.3e-25 119.8 112 49.1
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.9e-25 119.4 133 44.4
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.9e-25 119.4 133 44.4
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.9e-25 119.4 133 44.4
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 2.9e-25 119.4 120 47.5
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 3.8e-25 119.0 115 51.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 3.8e-25 119.0 131 45.0
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 5.0e-25 118.6 133 44.4
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 5.0e-25 118.6 133 44.4
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 5.0e-25 118.6 119 47.9
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 5.0e-25 118.6 128 47.7
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 5.0e-25 118.6 131 47.3
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 6.6e-25 118.2 115 49.6
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 6.6e-25 118.2 98 56.1
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 8.6e-25 117.9 129 46.5
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 8.6e-25 117.9 130 46.9
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 8.6e-25 117.9 110 50.9
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 8.6e-25 117.9 98 56.1
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 8.6e-25 117.9 115 48.7
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.6e-25 117.9 134 44.0
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.1e-24 117.5 126 46.8
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 1.5e-24 117.1 118 47.5
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.9e-24 116.7 113 48.7
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 3.3e-24 115.9 123 47.2
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 4.2e-24 115.5 111 50.5
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 4.2e-24 115.5 120 46.7
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 5.5e-24 115.2 131 44.3
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 7.2e-24 114.8 113 49.6
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 7.2e-24 114.8 113 48.7
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 7.2e-24 114.8 117 45.3
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 9.5e-24 114.4 96 53.1
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.2e-23 114.0 132 45.5
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.6e-23 113.6 118 47.5
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 2.1e-23 113.2 117 44.4
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 2.8e-23 112.8 131 43.5
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 2.8e-23 112.8 111 47.7
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 2.8e-23 112.8 170 38.2
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.6e-23 112.5 116 48.3
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 3.6e-23 112.5 122 46.7
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 3.6e-23 112.5 147 40.1
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 4.7e-23 112.1 110 48.2
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 4.7e-23 112.1 120 47.5
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 4.7e-23 112.1 94 54.3
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 6.1e-23 111.7 131 43.5
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 6.1e-23 111.7 111 49.5
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 8.0e-23 111.3 111 48.6
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 8.0e-23 111.3 116 44.8
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.4e-22 110.5 85 57.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.8e-22 110.2 111 49.5
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.8e-22 110.2 96 52.1
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.3e-22 109.8 96 52.1
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 3.0e-22 109.4 137 40.9
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 5.2e-22 108.6 78 59.0
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 8.9e-22 107.8 113 46.9
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 8.9e-22 107.8 113 46.9
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 8.9e-22 107.8 96 52.1
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 8.9e-22 107.8 120 46.7
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 7.5e-21 104.8 120 45.0
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 1.7e-20 103.6 108 50.9
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 8.3e-20 101.3 110 47.3
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 1.1e-19 100.9 110 45.5
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.4e-19 99.8 110 44.5
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 9.2e-19 97.8 114 40.4
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 3.5e-18 95.9 72 51.4
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 1.0e-14 84.3 88 51.1
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 1.0e-14 84.3 75 57.3
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 1.0e-14 84.3 86 52.3
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.4e-14 84.0 106 43.4
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.8e-14 83.6 98 44.9
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 1.8e-14 83.6 55 61.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 6.8e-14 81.6 99 45.5
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 8.9e-14 81.3 83 51.8
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.9e-12 75.5 85 49.4
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.4e-12 75.1 72 55.6
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 8.3e-12 74.7 109 39.4
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.6e-10 70.5 46 67.4
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 1.7e-09 67.0 80 45.0
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 7.3e-08 61.6 61 49.2
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 8.9e-06 54.7 111 33.3


User provided reference genes

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