Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17941 Sequoiadendron giganteum HOM05D002380 ORTHO05D008286 2.9e-82 308.5 158 100.0
Aqoxy1G02993 Aquilegia oxysepala HOM05D002380 ORTHO05D008286 1.7e-50 203.0 159 64.8
Rhsim06G0166100 Rhododendron simsii HOM05D002380 ORTHO05D008286 2.1e-48 196.1 158 61.4
CSS0029680 Camellia sinensis var. sinensis HOM05D002380 ORTHO05D008286 3.6e-48 195.3 158 62.0
Cc05_g03220 Coffea canephora HOM05D002380 ORTHO05D008286 6.1e-48 194.5 158 61.4
Sc21g0001190 Simmondsia chinensis HOM05D002380 ORTHO05D008286 6.1e-48 194.5 158 61.4
CiPaw.04G112000 Carya illinoinensis HOM05D002380 ORTHO05D008286 8.0e-48 194.1 158 62.0
Nn1g03403 Nelumbo nucifera HOM05D002380 ORTHO05D008286 8.0e-48 194.1 164 62.2
CANSAT64G0203 Cannabis sativa HOM05D002380 ORTHO05D008286 1.4e-47 193.4 157 61.1
Dinv08737 Davidia involucrata HOM05D002380 ORTHO05D008286 1.8e-47 193.0 158 61.4
Lj1A778T40 Lonicera japonica HOM05D002380 ORTHO05D008286 1.8e-47 193.0 158 62.0
vmacro12176 Vaccinium macrocarpon HOM05D002380 ORTHO05D008286 1.8e-47 193.0 158 60.8
Sopen01g045360 Solanum pennellii HOM05D002380 ORTHO05D008286 3.0e-47 192.2 160 60.6
Ciclev10014719m.g Citrus clementina HOM05D002380 ORTHO05D008286 4.0e-47 191.8 158 62.7
Eucgr.A01100 Eucalyptus grandis HOM05D002380 ORTHO05D008286 4.0e-47 191.8 157 59.9
Cfa014331 Carpinus fangiana HOM05D002380 ORTHO05D008286 5.2e-47 191.4 158 60.8
Solyc01g102950.3 Solanum lycopersicum HOM05D002380 ORTHO05D008286 6.8e-47 191.0 160 60.6
Gohir.A07G186600 Gossypium hirsutum HOM05D002380 ORTHO05D008286 8.8e-47 190.7 158 61.4
Gohir.D07G193100 Gossypium hirsutum HOM05D002380 ORTHO05D008286 8.8e-47 190.7 158 61.4
Gorai.001G216200 Gossypium raimondii HOM05D002380 ORTHO05D008286 8.8e-47 190.7 158 61.4
PSO541G2284 Papaver somniferum HOM05D002380 ORTHO05D008286 8.8e-47 190.7 158 60.1
TAR626G1235 Trochodendron aralioides HOM05D002380 ORTHO05D008286 1.2e-46 190.3 158 60.1
ClCG02G002150 Citrullus lanatus HOM05D002380 ORTHO05D008286 1.5e-46 189.9 158 59.5
Os08g0422000 Oryza sativa ssp. japonica HOM05D002380 ORTHO05D008286 2.0e-46 189.5 157 59.9
GSVIVG01030484001 Vitis vinifera HOM05D002380 ORTHO05D008286 2.0e-46 189.5 158 60.8
Aa31LG5G4710 Aethionema arabicum HOM05D002380 ORTHO05D008286 2.6e-46 189.1 158 59.5
CsaV3_7G003340 Cucumis sativus L. HOM05D002380 ORTHO05D008286 2.6e-46 189.1 158 58.2
Duzib138G0368 Durio zibethinus HOM05D002380 ORTHO05D008286 4.4e-46 188.3 158 59.5
CAN.G855.60 Capsicum annuum HOM05D002380 ORTHO05D008286 5.7e-46 188.0 159 60.4
COL.COLO4_21855 Corchorus olitorius HOM05D002380 ORTHO05D008286 5.7e-46 188.0 158 59.5
Haze_12786 Corylus avellana HOM05D002380 ORTHO05D008286 7.5e-46 187.6 157 59.2
PSO675G4452 Papaver somniferum HOM05D002380 ORTHO05D008286 1.3e-45 186.8 159 60.4
Atru.chr6.3236 Acer truncatum HOM05D002380 ORTHO05D008286 1.7e-45 186.4 158 59.5
Nitab4.5_0005164g0050 Nicotiana tabacum HOM05D002380 ORTHO05D006960 1.7e-45 186.4 160 60.0
Prupe.3G212600 Prunus persica HOM05D002380 ORTHO05D008286 1.7e-45 186.4 158 58.9
QL08p031162 Quercus lobata HOM05D002380 ORTHO05D008286 1.7e-45 186.4 157 59.9
SalBow1G4831 Salvia bowleyana HOM05D002380 ORTHO05D008286 1.7e-45 186.4 159 59.1
Actinidia13740 Actinidia chinensis HOM05D002380 ORTHO05D008286 2.2e-45 186.0 158 57.6
MD09G1112100 Malus domestica HOM05D002380 ORTHO05D008286 2.2e-45 186.0 158 58.2
MELO3C018839.2 Cucumis melo HOM05D002380 ORTHO05D008286 2.8e-45 185.7 161 58.4
Manes.12G071600 Manihot esculenta HOM05D002380 ORTHO05D008286 2.8e-45 185.7 160 60.0
PGR042G3960 Punica granatum HOM05D002380 ORTHO05D008286 2.8e-45 185.7 158 58.2
arahy.Tifrunner.gnm1.ann1.Y9X1U6 Arachis hypogaea HOM05D002380 ORTHO05D008286 3.7e-45 185.3 158 56.3
Nitab4.5_0003247g0030 Nicotiana tabacum HOM05D002380 ORTHO05D006960 3.7e-45 185.3 160 59.4
AUR62037919 Chenopodium quinoa HOM05D002380 ORTHO05D008286 4.8e-45 184.9 158 58.9
SalBow1G6561 Salvia bowleyana HOM05D002380 ORTHO05D008286 4.8e-45 184.9 159 59.1
AL4G28040 Arabidopsis lyrata HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 57.6
FvH4_6g42610 Fragaria vesca HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 57.6
FAN14G4830 Fragaria x ananassa HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 57.6
HanXRQChr10g0306601 Helianthus annuus HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 58.2
Hma1.2p1_0445F.1_g154520 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 57.6
Hma1.2p1_0445F.1_g154530 Hydrangea macrophylla HOM05D002380 ORTHO05D008286 8.3e-45 184.1 158 57.6
Zm00001eb179140 Zea mays HOM05D002380 ORTHO05D008286 8.3e-45 184.1 159 59.1
EL10Ac7g16733 Beta vulgaris HOM05D002380 ORTHO05D008286 1.1e-44 183.7 159 59.1
ECA234G2702 Erigeron canadensis HOM05D002380 ORTHO05D008286 1.1e-44 183.7 158 58.2
FAN05G1087 Fragaria x ananassa HOM05D002380 ORTHO05D008286 1.1e-44 183.7 158 57.6
DCAR_019750 Daucus carota HOM05D002380 ORTHO05D008286 1.4e-44 183.3 158 58.2
Sed0027871 Sechium edule HOM05D002380 ORTHO05D008286 1.4e-44 183.3 159 57.9
RcHm_v2.0_Chr2g0158461 Rosa chinensis HOM05D002380 ORTHO05D008286 1.8e-44 183.0 158 57.0
arahy.Tifrunner.gnm1.ann1.C2B2I7 Arachis hypogaea HOM05D002380 ORTHO05D008286 3.1e-44 182.2 158 56.3
Cpa.g.sc132.5 Carica papaya HOM05D002380 ORTHO05D008286 4.1e-44 181.8 164 58.5
Ca_06119_v3 Cicer arietinum L. HOM05D002380 ORTHO05D008286 4.1e-44 181.8 158 57.6
Carub.0004s1397 Capsella rubella HOM05D002380 ORTHO05D008286 9.1e-44 180.6 158 56.3
Sabra14G0118600 Salix brachista HOM05D002380 ORTHO05D008286 9.1e-44 180.6 159 58.5
THA.LOC104826140 Tarenaya hassleriana HOM05D002380 ORTHO05D008286 9.1e-44 180.6 158 59.5
Psat0s2606g0080 Pisum sativum HOM05D002380 ORTHO05D008286 1.2e-43 180.3 158 57.0
Potri.014G156800 Populus trichocarpa HOM05D002380 ORTHO05D008286 1.2e-43 180.3 158 57.0
AUR62040170 Chenopodium quinoa HOM05D002380 ORTHO05D008286 1.6e-43 179.9 158 58.2
Medtr8g465870 Medicago truncatula HOM05D002380 ORTHO05D008286 2.7e-43 179.1 158 55.7
VMungo0647G2578 Vigna mungo HOM05D002380 ORTHO05D008286 2.7e-43 179.1 158 56.3
Mapoly0041s0126 Marchantia polymorpha HOM05D002380 ORTHO05D008286 3.5e-43 178.7 158 55.7
Sp4g14960 Schrenkiella parvula HOM05D002380 ORTHO05D008286 3.5e-43 178.7 159 58.5
AT2G32640 Arabidopsis thaliana HOM05D002380 ORTHO05D008286 7.7e-43 177.6 159 57.9
CDE04G2212 Ceratophyllum demersum HOM05D002380 ORTHO05D008286 7.7e-43 177.6 157 59.2
Thhalv10016422m.g Eutrema salsugineum HOM05D002380 ORTHO05D008286 7.7e-43 177.6 158 56.3
Peaxi162Scf00011g02118 Petunia axillaris HOM05D002380 ORTHO05D008286 7.7e-43 177.6 175 55.4
TWI18G0959 Tripterygium wilfordii HOM05D002380 ORTHO05D008286 7.7e-43 177.6 159 57.9
BcaC01g05900 Brassica carinata HOM05D002380 ORTHO05D008286 1.0e-42 177.2 158 55.7
A03p18220 Brassica napus HOM05D002380 ORTHO05D008286 1.0e-42 177.2 160 56.2
BolC3t14508H Brassica oleracea HOM05D002380 ORTHO05D008286 1.0e-42 177.2 160 56.2
TPR.G26188 Trifolium pratense HOM05D002380 ORTHO05D008286 1.0e-42 177.2 159 56.0
C03p21270 Brassica napus HOM05D002380 ORTHO05D008286 1.3e-42 176.8 158 55.7
CARHR126480 Cardamine hirsuta HOM05D002380 ORTHO05D008286 1.3e-42 176.8 158 57.0
Glyma.14G046600 Glycine max HOM05D002380 ORTHO05D008286 1.3e-42 176.8 160 57.5
BcaB01g03970 Brassica carinata HOM05D002380 ORTHO05D008286 1.7e-42 176.4 158 55.7
BraA03t11082Z Brassica rapa HOM05D002380 ORTHO05D008286 2.2e-42 176.0 160 56.2
LjContig00564g0001978 Lotus japonicus HOM05D002380 ORTHO05D008286 2.2e-42 176.0 158 52.5
LjContig00564g0004339 Lotus japonicus HOM05D002380 ORTHO05D008286 2.2e-42 176.0 159 53.5
ATR0059G008 Amborella trichopoda HOM05D002380 ORTHO05D008286 5.0e-42 174.9 154 55.2
Migut.H01235 Erythranthe guttata HOM05D002380 ORTHO05D008286 5.0e-42 174.9 161 57.1
Phvul.008G211500 Phaseolus vulgaris HOM05D002380 ORTHO05D008286 6.5e-42 174.5 157 56.7
Ah.15g091260 Amaranthus hybridus HOM05D002380 ORTHO05D008286 1.5e-41 173.3 158 55.1
Pp3c11_22720 Physcomitrium patens HOM05D002380 ORTHO05D008286 1.0e-39 167.2 159 53.5
SMO111G0098 Selaginella moellendorffii HOM05D002380 ORTHO05D008286 2.3e-39 166.0 175 48.6
Thecc.01G180100 Theobroma cacao HOM05D002380 ORTHO05D008286 5.2e-39 164.9 158 53.2
Lsat_1_v5_gn_5_123621 Lactuca sativa HOM05D002380 ORTHO05D008286 5.9e-35 151.4 156 51.9
Lalb_Chr04g0249901 Lupinus albus HOM05D002380 ORTHO05D008286 7.7e-35 151.0 93 72.0
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 8.6e-34 147.5 163 50.9
MBI19_g44049_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 1.5e-33 146.7 113 63.7
unitig_62.g23230 Utricularia gibba HOM05D002380 ORTHO05D008286 1.9e-33 146.4 114 60.5
FAN02G0433 Fragaria x ananassa HOM05D002380 ORTHO05D008286 2.1e-32 142.9 136 54.4
HPP92_026432 Vanilla planifolia HOM05D002380 ORTHO05D008286 1.8e-31 139.8 93 67.7
Cre06.g264250 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 9.8e-30 134.0 168 44.6
Cre04.g221550 Chlamydomonas reinhardtii HOM05D002380 ORTHO05D008286 2.8e-24 115.9 91 58.2
AUR62044039 Chenopodium quinoa HOM05D002380 ORTHO05D008286 3.1e-23 112.5 158 42.4
MBI19_g42463_MAGBIO Magnolia biondii HOM05D002380 ORTHO05D008286 8.9e-23 110.9 158 43.7


User provided reference genes

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