Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 1.3e-188 662.9 326 100.0
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 2.0e-45 187.2 129 66.7
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.7e-44 184.1 135 64.4
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 5.0e-44 182.6 130 66.9
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.1e-43 181.4 130 66.2
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 2.5e-43 180.3 130 66.2
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 3.2e-43 179.9 130 64.6
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 5.5e-43 179.1 168 53.6
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 2.1e-42 177.2 130 64.6
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 3.9e-41 172.9 129 65.1
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 5.1e-41 172.6 130 65.4
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 5.1e-41 172.6 130 63.1
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 1.5e-40 171.0 130 63.1
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.5e-40 171.0 130 63.8
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.9e-40 170.6 168 53.6
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.5e-40 170.2 168 53.0
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 3.3e-40 169.9 130 59.2
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 4.3e-40 169.5 130 62.3
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 4.3e-40 169.5 130 63.8
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 4.3e-40 169.5 130 60.0
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 4.3e-40 169.5 168 52.4
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 5.7e-40 169.1 166 51.8
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 7.4e-40 168.7 130 60.8
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 1.3e-39 167.9 130 62.3
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 2.2e-39 167.2 168 53.0
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 2.2e-39 167.2 130 60.0
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 2.2e-39 167.2 130 61.5
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 2.8e-39 166.8 166 51.8
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 2.8e-39 166.8 130 61.5
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 3.7e-39 166.4 130 60.8
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 3.7e-39 166.4 130 59.2
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 4.8e-39 166.0 130 60.8
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 6.3e-39 165.6 130 58.5
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 8.2e-39 165.2 126 61.1
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 8.2e-39 165.2 130 60.8
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.1e-38 164.9 145 56.6
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.1e-38 164.9 124 62.9
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.4e-38 164.5 130 60.0
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 1.8e-38 164.1 137 59.1
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 3.1e-38 163.3 130 60.0
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 3.1e-38 163.3 137 58.4
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 5.3e-38 162.5 130 61.5
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 9.1e-38 161.8 134 59.0
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 9.1e-38 161.8 130 60.0
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 9.1e-38 161.8 166 51.2
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 1.2e-37 161.4 130 60.8
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 1.2e-37 161.4 138 57.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.2e-37 161.4 168 48.8
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.5e-37 161.0 133 57.9
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 2.6e-37 160.2 170 49.4
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 2.6e-37 160.2 131 51.1
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 2.6e-37 160.2 130 60.0
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 3.4e-37 159.8 130 60.0
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 3.4e-37 159.8 166 50.6
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 4.5e-37 159.5 130 60.8
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 4.5e-37 159.5 130 57.7
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 5.9e-37 159.1 130 57.7
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 7.7e-37 158.7 130 59.2
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 7.7e-37 158.7 166 48.2
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.9e-36 156.8 128 57.8
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 5.0e-36 156.0 168 50.6
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 8.5e-36 155.2 127 56.7
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.4e-35 154.5 130 60.8
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.9e-35 154.1 166 49.4
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 2.5e-35 153.7 132 53.8
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 3.2e-35 153.3 124 59.7
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 7.2e-35 152.1 130 58.5
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 1.2e-34 151.4 130 59.2
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.2e-34 151.4 130 59.2
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 1.6e-34 151.0 130 59.2
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 1.8e-33 147.5 130 56.2
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.3e-33 147.1 130 57.7
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 2.0e-32 144.1 143 50.3
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.7e-32 142.5 131 55.0
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 1.3e-31 141.4 130 56.2
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 1.3e-31 141.4 130 56.2
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 1.3e-31 141.4 130 56.2
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.8e-31 140.2 128 54.7
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 1.8e-30 137.5 140 50.0
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 4.1e-30 136.3 126 54.0
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 2.0e-29 134.0 136 51.5
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.2e-28 130.6 137 51.8
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 1.8e-25 120.9 130 46.9
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.1e-24 118.2 130 48.5
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.3e-23 112.5 90 57.8
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 2.6e-21 107.1 174 39.1
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 7.7e-21 105.5 112 47.3
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.3e-20 104.8 111 48.6
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 8.5e-20 102.1 79 60.8
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 2.5e-19 100.5 144 36.8
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 6.7e-17 92.4 76 53.9
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 8.8e-17 92.0 137 40.1
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.7e-15 87.8 112 40.2
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.1e-14 83.2 76 50.0
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 2.7e-13 80.5 47 83.0
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 3.5e-13 80.1 119 35.3
SEGI_21737 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 6.1e-10 69.3 84 48.8


User provided reference genes

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