Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17902 Sequoiadendron giganteum HOM05D012667 ORTHO05D020263 5.6e-53 210.7 108 100.0
SEGI_26028 Sequoiadendron giganteum HOM05D012667 ORTHO05D000004 5.7e-21 104.4 71 67.6
SEGI_06815 Sequoiadendron giganteum HOM05D000617 ORTHO05D000478 1.5e-18 96.3 72 63.9
SEGI_04638 Sequoiadendron giganteum HOM05D012667 ORTHO05D011909 2.6e-18 95.5 60 73.3
SEGI_35398 Sequoiadendron giganteum HOM05D012667 ORTHO05D020263 1.0e-17 93.6 85 52.9
SEGI_19164 Sequoiadendron giganteum HOM05D000003 ORTHO05D011463 5.5e-16 87.8 60 63.3
SEGI_18143 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 3.6e-15 85.1 72 54.2
SEGI_21140 Sequoiadendron giganteum HOM05D012667 ORTHO05D011463 4.7e-15 84.7 72 56.9
SEGI_09454 Sequoiadendron giganteum HOM05D012667 ORTHO05D011463 6.1e-15 84.3 60 66.7
SEGI_04725 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 3.0e-14 82.0 64 56.2
SEGI_08816 Sequoiadendron giganteum HOM05D012667 ORTHO05D011463 4.1e-11 71.6 60 58.3
SEGI_37939 Sequoiadendron giganteum HOM05D000967 ORTHO05D000796 1.6e-10 69.7 71 50.7
SEGI_26553 Sequoiadendron giganteum HOM05D000003 ORTHO05D000004 5.9e-10 67.8 46 63.0
SEGI_23549 Sequoiadendron giganteum HOM05D012667 ORTHO05D011087 1.0e-09 67.0 60 51.7
SEGI_12857 Sequoiadendron giganteum HOM05D000003 ORTHO05D011087 1.3e-09 66.6 53 54.7
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 1.5e-08 63.2 68 44.1
SEGI_01569 Sequoiadendron giganteum HOM05D012667 ORTHO05D020263 3.2e-08 62.0 37 73.0
Pp3c11_10220 Physcomitrium patens HOM05D000003 ORTHO05D000004 9.4e-08 60.5 72 37.5
Pp3c1_40810 Physcomitrium patens HOM05D000003 ORTHO05D000004 9.4e-08 60.5 72 37.5
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 1.2e-07 60.1 72 41.7
CBR_g41747 Chara braunii HOM05D000003 ORTHO05D000004 1.6e-07 59.7 65 43.1
CBR_g44460 Chara braunii HOM05D001740 ORTHO05D001468 3.6e-07 58.5 67 40.3
CBR_g8236 Chara braunii HOM05D000003 ORTHO05D000004 3.6e-07 58.5 72 40.3
AagrBONN_evm.TU.Sc2ySwM_117.2203 Anthoceros agrestis HOM05D000003 ORTHO05D000004 4.7e-07 58.2 70 37.1
CBR_g2942 Chara braunii HOM05D000003 ORTHO05D000004 4.7e-07 58.2 72 41.7
CBR_g34903 Chara braunii HOM05D001740 ORTHO05D000004 4.7e-07 58.2 72 40.3
CBR_g20085 Chara braunii HOM05D000003 ORTHO05D000004 6.1e-07 57.8 63 44.4
CBR_g26181 Chara braunii HOM05D000003 ORTHO05D000004 6.1e-07 57.8 72 37.5
CBR_g3090 Chara braunii HOM05D000003 ORTHO05D001468 6.1e-07 57.8 72 37.5
CBR_g50019 Chara braunii HOM05D000003 ORTHO05D000004 6.1e-07 57.8 72 43.1
CBR_g31186 Chara braunii HOM05D001740 ORTHO05D000004 8.0e-07 57.4 72 33.3
CBR_g40478 Chara braunii HOM05D001740 ORTHO05D001468 8.0e-07 57.4 70 38.6
CBR_g50382 Chara braunii HOM05D000003 ORTHO05D000004 8.0e-07 57.4 61 45.9
CBR_g32463 Chara braunii HOM05D000003 ORTHO05D001468 1.0e-06 57.0 70 40.0
CBR_g8604 Chara braunii HOM05D000003 ORTHO05D001468 1.0e-06 57.0 72 37.5
CBR_g20326 Chara braunii HOM05D001740 ORTHO05D001468 1.4e-06 56.6 68 38.2
SEGI_26800 Sequoiadendron giganteum HOM05D001049 ORTHO05D001986 1.4e-06 56.6 35 85.7
SEGI_40879 Sequoiadendron giganteum HOM05D012667 ORTHO05D011463 1.8e-06 56.2 41 68.3
Pp3c19_8170 Physcomitrium patens HOM05D000003 ORTHO05D011463 2.3e-06 55.8 72 37.5
CBR_g24116 Chara braunii HOM05D000173 ORTHO05D001468 3.0e-06 55.5 72 37.5
CBR_g24371 Chara braunii HOM05D000003 ORTHO05D000004 3.0e-06 55.5 64 35.9
CBR_g29368 Chara braunii HOM05D001740 ORTHO05D000004 3.0e-06 55.5 72 38.9
CBR_g55436 Chara braunii HOM05D000003 ORTHO05D000004 3.0e-06 55.5 67 40.3
AagrBONN_evm.TU.Sc2ySwM_368.2320 Anthoceros agrestis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 70 38.6
CBR_g11220 Chara braunii HOM05D000003 ORTHO05D001468 4.0e-06 55.1 72 37.5
CBR_g12724 Chara braunii HOM05D000003 ORTHO05D000004 4.0e-06 55.1 63 41.3
CANSAT25G3699 Cannabis sativa HOM05D000003 ORTHO05D000004 5.2e-06 54.7 68 38.2
CBR_g12740 Chara braunii HOM05D001740 ORTHO05D000004 5.2e-06 54.7 63 41.3
AagrBONN_evm.TU.Sc2ySwM_344.837 Anthoceros agrestis HOM05D000003 ORTHO05D000004 6.7e-06 54.3 60 45.0
CBR_g12086 Chara braunii HOM05D000003 ORTHO05D000004 6.7e-06 54.3 72 40.3
CBR_g16130 Chara braunii HOM05D001740 ORTHO05D001468 6.7e-06 54.3 67 41.8
CBR_g19825 Chara braunii HOM05D001740 ORTHO05D000004 6.7e-06 54.3 68 39.7
CBR_g29740 Chara braunii HOM05D002280 ORTHO05D002322 6.7e-06 54.3 72 40.3
HanXRQChr07g0203731 Helianthus annuus HOM05D000003 ORTHO05D000004 6.7e-06 54.3 66 40.9
Pp3c14_14620 Physcomitrium patens HOM05D000003 ORTHO05D000004 6.7e-06 54.3 62 38.7
TPR.G34429 Trifolium pratense HOM05D000003 ORTHO05D000004 6.7e-06 54.3 69 34.8
TPR.G39606 Trifolium pratense HOM05D000003 ORTHO05D000004 6.7e-06 54.3 69 34.8
CBR_g31137 Chara braunii HOM05D001740 ORTHO05D000004 8.8e-06 53.9 68 38.2
CBR_g41585 Chara braunii HOM05D001740 ORTHO05D001468 8.8e-06 53.9 71 38.0


User provided reference genes

Program Settings