Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17880 Sequoiadendron giganteum HOM05D005525 ORTHO05D006341 8.3e-217 756.9 424 100.0
HPP92_027874 Vanilla planifolia HOM05D005525 ORTHO05D006341 9.1e-14 82.4 399 24.1
Phvul.009G051800 Phaseolus vulgaris HOM05D005525 ORTHO05D006341 2.5e-11 74.3 265 26.0
Nitab4.5_0007888g0020 Nicotiana tabacum HOM05D005525 ORTHO05D006341 7.2e-11 72.8 254 26.0
Hma1.2p1_1587F.1_g292280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 1.2e-10 72.0 273 26.4
Rhsim09G0206200 Rhododendron simsii HOM05D005525 ORTHO05D006341 1.2e-10 72.0 260 27.3
HPP92_006332 Vanilla planifolia HOM05D005525 ORTHO05D006341 2.1e-10 71.2 357 24.9
CSS0028512 Camellia sinensis var. sinensis HOM05D005525 ORTHO05D006341 3.6e-10 70.5 249 26.1
Nitab4.5_0007005g0020 Nicotiana tabacum HOM05D005525 ORTHO05D006341 8.0e-10 69.3 262 26.3
Atru.chr12.2235 Acer truncatum HOM05D005525 ORTHO05D006341 1.4e-09 68.6 240 25.0
Hma1.2p1_0404F.1_g145280 Hydrangea macrophylla HOM05D005525 ORTHO05D006341 1.4e-09 68.6 284 25.0
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 1.8e-09 68.2 390 23.8
FAN06G1464 Fragaria x ananassa HOM05D005525 ORTHO05D006341 3.9e-09 67.0 242 25.2
FAN06G2949 Fragaria x ananassa HOM05D005525 ORTHO05D006341 6.7e-09 66.2 242 25.2
Glyma.04G234800 Glycine max HOM05D005525 ORTHO05D006341 6.7e-09 66.2 389 22.6
TAR425G0002 Trochodendron aralioides HOM05D005525 ORTHO05D006341 8.8e-09 65.9 257 24.5
vmacro10127 Vaccinium macrocarpon HOM05D005525 ORTHO05D006341 8.8e-09 65.9 240 27.5
CiPaw.05G197600 Carya illinoinensis HOM05D005525 ORTHO05D006341 1.5e-08 65.1 251 24.3
SEGI_37005 Sequoiadendron giganteum HOM05D005525 ORTHO05D006341 1.5e-08 65.1 357 21.6
THA.LOC104799969 Tarenaya hassleriana HOM05D005525 ORTHO05D006341 1.5e-08 65.1 428 20.6
TAR636G1140 Trochodendron aralioides HOM05D005525 ORTHO05D006341 2.0e-08 64.7 241 24.5
Pp3c14_1700 Physcomitrium patens HOM05D005525 ORTHO05D006341 3.3e-08 63.9 378 22.0
PSO063G1159 Papaver somniferum HOM05D005525 ORTHO05D006341 5.7e-08 63.2 262 25.2
CDE10G1205 Ceratophyllum demersum HOM05D005525 ORTHO05D006341 7.4e-08 62.8 377 20.4
ClCG05G008980 Citrullus lanatus HOM05D005525 ORTHO05D006341 9.7e-08 62.4 284 23.9
Ciclev10018919m.g Citrus clementina HOM05D005525 ORTHO05D006341 1.3e-07 62.0 246 24.8
Medtr3g091650 Medicago truncatula HOM05D005525 ORTHO05D006341 1.3e-07 62.0 398 23.9
Peaxi162Scf00740g10015 Petunia axillaris HOM05D005525 ORTHO05D006341 1.3e-07 62.0 254 23.2
DCAR_010595 Daucus carota HOM05D005525 ORTHO05D006341 2.2e-07 61.2 259 25.9
MBI07_g24776_MAGBIO Magnolia biondii HOM05D005525 ORTHO05D006341 2.2e-07 61.2 240 25.4
PSO170G3224 Papaver somniferum HOM05D005525 ORTHO05D006341 2.2e-07 61.2 250 25.6
Solyc03g083060.3 Solanum lycopersicum HOM05D005525 ORTHO05D006341 2.8e-07 60.8 246 24.0
Sopen03g022860 Solanum pennellii HOM05D005525 ORTHO05D006341 2.8e-07 60.8 246 24.0
PGSC0003DMG400018550 Solanum tuberosum HOM05D005525 ORTHO05D006341 2.8e-07 60.8 246 23.6
arahy.Tifrunner.gnm1.ann1.SHH15X Arachis hypogaea HOM05D005525 ORTHO05D006341 3.7e-07 60.5 422 23.5
CsaV3_3G019800 Cucumis sativus L. HOM05D005525 ORTHO05D006341 3.7e-07 60.5 284 23.6
ATR0602G130 Amborella trichopoda HOM05D005525 ORTHO05D006341 4.8e-07 60.1 267 24.7
Actinidia03175 Actinidia chinensis HOM05D005525 ORTHO05D006341 6.3e-07 59.7 246 23.6
Aqoxy5G03920 Aquilegia oxysepala HOM05D005525 ORTHO05D006341 6.3e-07 59.7 323 23.8
Sabra12G0015700 Salix brachista HOM05D005525 ORTHO05D006341 6.3e-07 59.7 289 24.6
TPR.G18747 Trifolium pratense HOM05D005525 ORTHO05D006341 6.3e-07 59.7 441 23.1
MELO3C008500.2 Cucumis melo HOM05D005525 ORTHO05D006341 8.2e-07 59.3 284 23.6
TAR375G0567 Trochodendron aralioides HOM05D005525 ORTHO05D006341 8.2e-07 59.3 330 23.3
arahy.Tifrunner.gnm1.ann1.9S9EKZ Arachis hypogaea HOM05D005525 ORTHO05D006341 1.1e-06 58.9 419 22.9
Eucgr.A01450 Eucalyptus grandis HOM05D005525 ORTHO05D006341 1.1e-06 58.9 224 24.6
Lj3A903T39 Lonicera japonica HOM05D005525 ORTHO05D006341 1.1e-06 58.9 270 25.9
Pp3c10_6810 Physcomitrium patens HOM05D019088 ORTHO05D006341 1.1e-06 58.9 354 25.4
Sed0006937 Sechium edule HOM05D005525 ORTHO05D006341 1.1e-06 58.9 284 23.2
unitig_92.g28252 Utricularia gibba HOM05D005525 ORTHO05D006341 1.1e-06 58.9 245 24.9
Duzib068G0374 Durio zibethinus HOM05D005525 ORTHO05D006341 1.4e-06 58.5 251 25.5
FvH4_7g31370 Fragaria vesca HOM05D005525 ORTHO05D006341 1.4e-06 58.5 242 24.0
Lsat_1_v5_gn_2_136220 Lactuca sativa HOM05D005525 ORTHO05D006341 1.4e-06 58.5 312 21.5
QL09p008682 Quercus lobata HOM05D005525 ORTHO05D006341 1.4e-06 58.5 250 24.8
Actinidia06143 Actinidia chinensis HOM05D005525 ORTHO05D006341 1.8e-06 58.2 241 22.8
CSS0016451 Camellia sinensis var. sinensis HOM05D005525 ORTHO05D006341 1.8e-06 58.2 279 24.4
FAN03G1856 Fragaria x ananassa HOM05D005525 ORTHO05D006341 1.8e-06 58.2 242 23.6
Prupe.2G309100 Prunus persica HOM05D005525 ORTHO05D006341 1.8e-06 58.2 254 22.8
COL.COLO4_16772 Corchorus olitorius HOM05D005525 ORTHO05D006341 2.4e-06 57.8 411 24.1
FAN01G0744 Fragaria x ananassa HOM05D005525 ORTHO05D006341 2.4e-06 57.8 242 24.0
Cfa016238 Carpinus fangiana HOM05D005525 ORTHO05D006341 3.1e-06 57.4 246 23.2
Gohir.A03G052000 Gossypium hirsutum HOM05D005525 ORTHO05D006341 3.1e-06 57.4 430 22.3
Ca_16715_v3 Cicer arietinum L. HOM05D005525 ORTHO05D006341 4.1e-06 57.0 395 22.5
CAN.G481.19 Capsicum annuum HOM05D005525 ORTHO05D006341 9.1e-06 55.8 246 23.2
Lalb_Chr08g0240181 Lupinus albus HOM05D005525 ORTHO05D006341 9.1e-06 55.8 394 22.8


User provided reference genes

Program Settings