Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17825 Sequoiadendron giganteum HOM05D004341 ORTHO05D005075 6.8e-94 347.4 191 100.0
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 2.4e-14 83.2 145 44.8
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 2.9e-12 76.3 145 46.9
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 1.5e-11 73.9 147 42.9
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 3.2e-11 72.8 149 42.3
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 3.2e-11 72.8 151 45.0
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 2.1e-10 70.1 50 68.0
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 3.6e-10 69.3 155 44.5
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 3.6e-10 69.3 148 48.0
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 3.6e-10 69.3 151 45.7
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 6.1e-10 68.6 51 66.7
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 6.1e-10 68.6 51 66.7
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 6.1e-10 68.6 51 66.7
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 8.0e-10 68.2 148 43.2
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 8.0e-10 68.2 51 64.7
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 8.0e-10 68.2 52 63.5
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 1.0e-09 67.8 147 44.9
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 1.0e-09 67.8 147 44.2
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 1.4e-09 67.4 149 45.6
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 1.4e-09 67.4 147 46.3
Oeu020262.1 Olea europaea HOM05D004341 ORTHO05D005075 1.4e-09 67.4 147 46.3
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 1.4e-09 67.4 49 65.3
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 1.8e-09 67.0 148 42.6
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 1.8e-09 67.0 151 44.4
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 1.8e-09 67.0 51 66.7
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 1.8e-09 67.0 49 65.3
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.8e-09 67.0 51 64.7
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 1.8e-09 67.0 51 64.7
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 2.3e-09 66.6 150 44.0
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 2.3e-09 66.6 51 66.7
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 2.3e-09 66.6 146 47.3
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 4.0e-09 65.9 149 45.0
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 4.0e-09 65.9 52 63.5
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 4.0e-09 65.9 52 63.5
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 4.0e-09 65.9 52 63.5
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 4.0e-09 65.9 51 62.7
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 4.0e-09 65.9 51 62.7
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 4.0e-09 65.9 51 66.7
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 4.0e-09 65.9 52 63.5
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 6.8e-09 65.1 149 39.6
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 8.8e-09 64.7 147 49.0
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 8.8e-09 64.7 149 44.3
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 1.2e-08 64.3 147 48.3
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 1.2e-08 64.3 46 69.6
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 1.2e-08 64.3 51 62.7
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 1.2e-08 64.3 158 43.7
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 1.5e-08 63.9 148 40.5
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 1.5e-08 63.9 50 64.0
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 2.6e-08 63.2 147 40.1
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 2.6e-08 63.2 147 40.1
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 2.6e-08 63.2 51 62.7
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 3.4e-08 62.8 147 41.5
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 3.4e-08 62.8 146 43.2
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 3.4e-08 62.8 51 64.7
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.4e-08 62.8 154 39.6
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 3.4e-08 62.8 154 39.6
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 3.4e-08 62.8 146 39.0
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 4.4e-08 62.4 146 44.5
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 4.4e-08 62.4 152 42.1
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 4.4e-08 62.4 146 42.5
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 4.4e-08 62.4 146 45.9
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 5.7e-08 62.0 52 61.5
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 7.5e-08 61.6 150 38.0
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 7.5e-08 61.6 152 44.7
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 7.5e-08 61.6 152 44.7
CsaV3_3G003450 Cucumis sativus L. HOM05D004341 ORTHO05D005075 7.5e-08 61.6 152 41.4
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 1.3e-07 60.8 152 42.1
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 1.3e-07 60.8 154 45.5
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 1.3e-07 60.8 147 46.9
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.7e-07 60.5 147 39.5
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 1.7e-07 60.5 146 47.3
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 2.2e-07 60.1 51 60.8
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 2.2e-07 60.1 147 43.5
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 2.8e-07 59.7 51 60.8
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 4.8e-07 58.9 159 42.1
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 4.8e-07 58.9 50 62.0
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 4.8e-07 58.9 157 43.9
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 4.8e-07 58.9 50 60.0
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 6.3e-07 58.5 148 42.6
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 6.3e-07 58.5 155 34.2
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 6.3e-07 58.5 52 59.6
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 6.3e-07 58.5 147 42.9
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 6.3e-07 58.5 51 58.8
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 1.1e-06 57.8 52 57.7
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 1.8e-06 57.0 146 37.0
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 1.8e-06 57.0 146 41.1
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.4e-06 56.6 155 32.9
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.4e-06 56.6 147 42.9
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 2.4e-06 56.6 147 42.9
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.1e-06 56.2 154 40.9
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 3.1e-06 56.2 148 41.2
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 3.1e-06 56.2 153 38.6
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 4.1e-06 55.8 146 44.5
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 4.1e-06 55.8 147 37.4
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 5.4e-06 55.5 150 41.3
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 7.0e-06 55.1 51 54.9
Nitab4.5_0015757g0020 Nicotiana tabacum HOM05D004341 ORTHO05D005075 7.0e-06 55.1 147 39.5
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 9.1e-06 54.7 155 32.3
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 9.1e-06 54.7 52 55.8
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 9.1e-06 54.7 51 56.9


User provided reference genes

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