Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17812 Sequoiadendron giganteum HOM05D006404 ORTHO05D008170 0.0e+00 2037.7 980 100.0
Nn7g36358 Nelumbo nucifera HOM05D006404 ORTHO05D008170 2.1e-284 982.6 965 50.2
TAR633G0603 Trochodendron aralioides HOM05D006404 ORTHO05D008170 1.4e-280 969.9 942 52.0
Potri.001G255700 Populus trichocarpa HOM05D006404 ORTHO05D008170 3.5e-279 965.3 942 51.4
Nn2g15163 Nelumbo nucifera HOM05D006404 ORTHO05D008170 6.0e-279 964.5 935 50.3
MD03G1172000 Malus domestica HOM05D006404 ORTHO05D008170 4.3e-277 958.4 947 49.9
RcHm_v2.0_Chr5g0053011 Rosa chinensis HOM05D006404 ORTHO05D008170 6.3e-276 954.5 945 50.2
FAN16G0405 Fragaria x ananassa HOM05D006404 ORTHO05D008170 8.2e-276 954.1 938 50.6
Ciclev10014162m.g Citrus clementina HOM05D006404 ORTHO05D008170 1.4e-275 953.4 935 50.3
FAN11G2181 Fragaria x ananassa HOM05D006404 ORTHO05D008170 4.1e-275 951.8 938 50.7
FvH4_3g28450 Fragaria vesca HOM05D006404 ORTHO05D008170 6.9e-275 951.0 938 50.6
CSS0037938 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 4.5e-274 948.3 960 48.9
QL01p004100 Quercus lobata HOM05D006404 ORTHO05D008170 5.9e-274 948.0 936 51.0
Manes.06G162300 Manihot esculenta HOM05D006404 ORTHO05D008170 1.7e-273 946.4 942 51.0
Zm00001eb332810 Zea mays HOM05D006404 ORTHO05D008170 4.6e-271 938.3 940 49.4
FAN21G1559 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.0e-270 937.2 965 49.2
Thecc.09G239000 Theobroma cacao HOM05D006404 ORTHO05D008170 1.1e-269 933.7 935 49.2
GSVIVG01031534001 Vitis vinifera HOM05D006404 ORTHO05D008170 1.5e-269 933.3 937 48.6
Potri.009G051100 Populus trichocarpa HOM05D006404 ORTHO05D008170 6.3e-268 927.9 950 49.4
Rhsim13G0217700 Rhododendron simsii HOM05D006404 ORTHO05D008170 1.5e-266 923.3 993 47.9
Gorai.006G126600 Gossypium raimondii HOM05D006404 ORTHO05D008170 7.7e-266 921.0 934 48.7
Cfa009810 Carpinus fangiana HOM05D006404 ORTHO05D008170 1.0e-265 920.6 933 49.8
Gohir.D09G109000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 1.7e-265 919.8 934 48.7
TWI32G0006 Tripterygium wilfordii HOM05D006404 ORTHO05D008170 5.0e-265 918.3 936 49.9
Gorai.009G074000 Gossypium raimondii HOM05D006404 ORTHO05D008170 2.1e-263 912.9 932 49.0
CsaV3_1G042990 Cucumis sativus L. HOM05D006404 ORTHO05D008170 3.0e-262 909.1 939 47.7
Aqoxy2G00213 Aquilegia oxysepala HOM05D006404 ORTHO05D008170 8.8e-262 907.5 934 48.0
ATR0307G124 Amborella trichopoda HOM05D006404 ORTHO05D008170 4.8e-260 901.7 964 48.2
MELO3C015171.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.1e-259 900.6 938 47.0
COL.COLO4_36457 Corchorus olitorius HOM05D006404 ORTHO05D008170 2.4e-259 899.4 868 51.2
Actinidia06923 Actinidia chinensis HOM05D006404 ORTHO05D008170 4.1e-259 898.7 847 52.3
Cc01_g05020 Coffea canephora HOM05D006404 ORTHO05D008170 6.9e-259 897.9 936 47.2
Prupe.4G254900 Prunus persica HOM05D006404 ORTHO05D008170 3.4e-258 895.6 842 51.4
Eucgr.B03709 Eucalyptus grandis HOM05D006404 ORTHO05D008170 7.7e-258 894.4 941 47.5
PGR102G1713 Punica granatum HOM05D006404 ORTHO05D008170 2.9e-257 892.5 933 49.0
ClCG03G013070 Citrullus lanatus HOM05D006404 ORTHO05D008170 5.0e-257 891.7 936 47.4
Sabra09G0037200 Salix brachista HOM05D006404 ORTHO05D008170 1.2e-255 887.1 936 47.9
MSTRG.12459 Avicennia marina HOM05D006404 ORTHO05D008170 2.8e-252 875.9 942 46.7
Nitab4.5_0007711g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 7.0e-251 871.3 929 49.3
Sabra16G0156500 Salix brachista HOM05D006404 ORTHO05D008170 1.6e-250 870.2 920 48.5
Glyma.12G020900 Glycine max HOM05D006404 ORTHO05D008170 2.5e-248 862.8 940 46.8
Glyma.01G227500 Glycine max HOM05D006404 ORTHO05D008170 1.6e-247 860.1 934 47.1
Lj3g0019929 Lotus japonicus HOM05D006404 ORTHO05D008170 2.1e-247 859.8 936 46.7
THA.LOC104811179 Tarenaya hassleriana HOM05D006404 ORTHO05D008170 2.1e-247 859.8 937 45.8
Sed0002434 Sechium edule HOM05D006404 ORTHO05D008170 4.7e-247 858.6 938 46.1
Solyc11g065340.2 Solanum lycopersicum HOM05D006404 ORTHO05D008170 1.4e-246 857.1 940 47.2
CANSAT54G0859 Cannabis sativa HOM05D006404 ORTHO05D008170 2.3e-246 856.3 858 48.6
CAN.G494.3 Capsicum annuum HOM05D006404 ORTHO05D008170 6.7e-246 854.7 928 47.2
Hund07470 Selenicereus undatus HOM05D006404 ORTHO05D008170 4.4e-245 852.0 937 45.0
VMungo1127G0106 Vigna mungo HOM05D006404 ORTHO05D008170 4.4e-245 852.0 932 45.7
Actinidia16347 Actinidia chinensis HOM05D006404 ORTHO05D008170 2.2e-244 849.7 816 52.1
Duzib150G0746 Durio zibethinus HOM05D006404 ORTHO05D008170 2.8e-244 849.4 936 46.7
VMungo1215G1207 Vigna mungo HOM05D006404 ORTHO05D008170 1.4e-243 847.0 937 45.9
Haze_23174 Corylus avellana HOM05D006404 ORTHO05D008170 7.0e-243 844.7 926 47.4
HanXRQChr13g0401241 Helianthus annuus HOM05D006404 ORTHO05D008170 3.5e-242 842.4 937 45.7
Sopen11g025080 Solanum pennellii HOM05D006404 ORTHO05D008170 4.5e-242 842.0 935 46.5
Psat7g172680 Pisum sativum HOM05D006404 ORTHO05D008170 1.7e-241 840.1 948 45.4
TPR.G13759 Trifolium pratense HOM05D006404 ORTHO05D008170 5.0e-241 838.6 936 46.5
Oeu061307.1 Olea europaea HOM05D006404 ORTHO05D008170 1.2e-239 833.9 891 48.1
Nitab4.5_0006123g0010 Nicotiana tabacum HOM05D006404 ORTHO05D008170 6.1e-239 831.6 913 47.9
MBI19_g45588_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 5.2e-238 828.6 842 48.6
DCAR_029968 Daucus carota HOM05D006404 ORTHO05D008170 8.8e-238 827.8 939 45.5
Sc16g0011280 Simmondsia chinensis HOM05D006404 ORTHO05D008170 7.5e-237 824.7 902 46.7
Migut.N02343 Erythranthe guttata HOM05D006404 ORTHO05D008170 6.3e-236 821.6 934 45.1
Medtr4g076810 Medicago truncatula HOM05D006404 ORTHO05D008170 1.8e-235 820.1 937 45.1
Ca_26059_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.1e-235 817.8 835 48.0
Ca_30127_v3 Cicer arietinum L. HOM05D006404 ORTHO05D008170 9.1e-235 817.8 835 48.0
Lalb_Chr03g0024521 Lupinus albus HOM05D006404 ORTHO05D008170 4.2e-232 808.9 940 44.9
SGA_v2.0_scaffold3G01478 Striga asiatica HOM05D006404 ORTHO05D008170 4.2e-232 808.9 933 44.2
PGSC0003DMG400029994 Solanum tuberosum HOM05D006404 ORTHO05D008170 4.0e-230 802.4 818 49.1
Peaxi162Scf00004g03311 Petunia axillaris HOM05D006404 ORTHO05D008170 1.5e-229 800.4 927 45.8
AUR62039864 Chenopodium quinoa HOM05D006404 ORTHO05D008170 4.9e-228 795.4 930 44.4
Atru.chr3.2649 Acer truncatum HOM05D006404 ORTHO05D008170 2.4e-227 793.1 730 52.3
vmacro04128 Vaccinium macrocarpon HOM05D006404 ORTHO05D008170 1.6e-226 790.4 963 43.9
arahy.Tifrunner.gnm1.ann1.BK260Y Arachis hypogaea HOM05D006404 ORTHO05D008170 2.3e-225 786.6 929 44.1
arahy.Tifrunner.gnm1.ann1.E0EAPG Arachis hypogaea HOM05D006404 ORTHO05D008170 2.9e-225 786.2 927 43.9
ECA233G0536 Erigeron canadensis HOM05D006404 ORTHO05D008170 9.5e-224 781.2 838 46.1
AUR62000151 Chenopodium quinoa HOM05D006404 ORTHO05D008170 1.6e-223 780.4 932 43.7
Mapoly0128s0014 Marchantia polymorpha HOM05D006404 ORTHO05D008170 3.0e-222 776.2 1015 42.8
Lsat_1_v5_gn_6_25840 Lactuca sativa HOM05D006404 ORTHO05D008170 2.4e-219 766.5 935 43.1
Ah.06g193910 Amaranthus hybridus HOM05D006404 ORTHO05D008170 1.2e-215 754.2 925 41.5
CiPaw.13G154900 Carya illinoinensis HOM05D006404 ORTHO05D008170 1.6e-210 737.3 719 50.6
Lj2A624G32 Lonicera japonica HOM05D006404 ORTHO05D008170 5.2e-206 722.2 950 42.1
Glyma.11G094500 Glycine max HOM05D006404 ORTHO05D008170 1.7e-204 717.2 744 47.6
Gohir.A05G070000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 6.0e-202 708.8 769 47.1
EL10Ac4g10212 Beta vulgaris HOM05D006404 ORTHO05D008170 6.0e-194 682.2 927 40.1
Duzib168G1842 Durio zibethinus HOM05D006404 ORTHO05D008170 2.4e-187 660.2 589 52.3
Gohir.A09G112300 Gossypium hirsutum HOM05D006404 ORTHO05D008170 9.0e-182 641.7 644 48.9
Cpa.g.sc84.27 Carica papaya HOM05D006404 ORTHO05D008170 5.5e-171 605.9 840 39.4
Os01g0275900 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 1.4e-163 581.3 596 45.8
Manes.14G004336 Manihot esculenta HOM05D006404 ORTHO05D008170 3.9e-161 573.2 957 37.4
Phvul.002G034601 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.3e-159 568.2 668 43.1
CSS0019486 Camellia sinensis var. sinensis HOM05D006404 ORTHO05D008170 7.9e-146 522.3 471 52.4
HPP92_028181 Vanilla planifolia HOM05D006404 ORTHO05D008170 1.5e-144 518.1 533 47.8
CBR_g12234 Chara braunii HOM05D006404 ORTHO05D008170 5.7e-144 516.2 862 35.7
Phvul.011G076700 Phaseolus vulgaris HOM05D006404 ORTHO05D008170 1.6e-125 454.9 546 43.8
Gohir.D05G073000 Gossypium hirsutum HOM05D006404 ORTHO05D008170 3.6e-122 443.7 457 47.7
unitig_27.g25000 Utricularia gibba HOM05D006404 ORTHO05D008170 3.7e-119 433.7 529 42.0
Gohir.D05G072932 Gossypium hirsutum HOM05D006404 ORTHO05D008170 2.0e-117 427.9 439 49.4
FAN25G0856 Fragaria x ananassa HOM05D006404 ORTHO05D008170 1.2e-98 365.5 388 47.7
Glyma.11G015367 Glycine max HOM05D006404 ORTHO05D008170 6.6e-92 343.2 379 44.9
HPP92_028182 Vanilla planifolia HOM05D006404 ORTHO05D008170 4.6e-85 320.5 320 48.1
Gohir.A09G112350 Gossypium hirsutum HOM05D006404 ORTHO05D008170 4.9e-63 247.3 269 47.2
Os01g0275950 Oryza sativa ssp. japonica HOM05D006404 ORTHO05D008170 2.3e-60 238.4 283 43.5
unitig_27.g24999 Utricularia gibba HOM05D006404 ORTHO05D008170 2.0e-56 225.3 279 41.2
PGSC0003DMG400035426 Solanum tuberosum HOM05D006404 ORTHO05D008170 3.9e-52 211.1 159 57.9
TAR633G2510 Trochodendron aralioides HOM05D006404 ORTHO05D008170 6.7e-52 210.3 257 46.3
Duzib168G1560 Durio zibethinus HOM05D006404 ORTHO05D008170 2.6e-48 198.4 226 45.6
MBI19_g48146_MAGBIO Magnolia biondii HOM05D006404 ORTHO05D008170 4.8e-42 177.6 255 40.8
Lsat_1_v5_gn_5_69941 Lactuca sativa HOM05D006404 ORTHO05D008170 1.1e-27 129.8 161 44.1
Lsat_1_v5_gn_8_47480 Lactuca sativa HOM05D006404 ORTHO05D008170 1.7e-26 125.9 161 43.5
Lsat_1_v5_gn_4_119980 Lactuca sativa HOM05D006404 ORTHO05D008170 1.5e-24 119.4 137 46.0
Atru.chr3.2650 Acer truncatum HOM05D006404 ORTHO05D008170 1.7e-23 115.9 108 57.4
PRCOL_00003209 Prasinoderma coloniale HOM05D006404 ORTHO05D008170 1.5e-22 112.8 761 22.9
PGSC0003DMG400025695 Solanum tuberosum HOM05D006404 ORTHO05D008170 2.5e-22 112.1 89 50.6
MELO3C030880.2 Cucumis melo HOM05D006404 ORTHO05D008170 5.9e-16 90.9 97 45.4
HPP92_012439 Vanilla planifolia HOM05D006404 ORTHO05D008170 1.1e-14 86.7 224 28.6
Thecc.01G390500 Theobroma cacao HOM05D006404 ORTHO05D008170 4.7e-13 81.3 114 39.5
MELO3C034790.2 Cucumis melo HOM05D006404 ORTHO05D008170 1.0e-12 80.1 67 49.3
MELO3C034469.2 Cucumis melo HOM05D006404 ORTHO05D003726 3.4e-11 75.1 77 45.5
MELO3C028471.2 Cucumis melo HOM05D006404 ORTHO05D008170 4.5e-08 64.7 51 49.0
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 1.9e-06 59.3 92 41.3
Atru.chr3.2651 Acer truncatum HOM05D006404 ORTHO05D008170 2.5e-06 58.9 57 43.9


User provided reference genes

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