Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 0.0e+00 1330.9 648 100.0
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 6.3e-91 339.3 566 36.6
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 5.2e-77 293.1 560 33.4
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 6.8e-77 292.7 572 32.5
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 4.4e-76 290.0 560 32.7
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 2.8e-75 287.3 560 33.4
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 4.8e-75 286.6 558 33.2
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 9.1e-74 282.3 558 33.5
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.5e-71 275.0 559 32.4
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 4.2e-71 273.5 621 30.4
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 2.8e-70 270.8 558 30.6
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 2.8e-70 270.8 574 31.4
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 4.7e-70 270.0 569 31.3
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 8.0e-70 269.2 547 33.3
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 8.9e-69 265.8 573 31.6
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 9.8e-68 262.3 575 32.3
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 2.8e-67 260.8 566 31.1
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.8e-67 260.8 554 30.5
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 2.8e-67 260.8 563 31.3
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 3.7e-67 260.4 569 30.9
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 6.3e-67 259.6 563 30.6
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.1e-66 258.8 560 30.0
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 2.4e-66 257.7 644 29.7
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 4.1e-66 256.9 555 30.3
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 4.1e-66 256.9 563 31.1
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 4.1e-66 256.9 561 29.9
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 5.4e-66 256.5 625 29.9
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 9.2e-66 255.8 571 31.0
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 9.2e-66 255.8 563 32.1
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.2e-65 255.4 563 30.4
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.2e-65 255.4 578 31.0
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 2.7e-65 254.2 590 30.2
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 3.5e-65 253.8 579 30.6
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 3.5e-65 253.8 546 30.0
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 3.5e-65 253.8 563 30.7
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 5.9e-65 253.1 563 31.6
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 2.3e-64 251.1 610 29.8
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 3.8e-64 250.4 607 29.2
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 5.0e-64 250.0 560 31.1
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 2.5e-63 247.7 587 28.4
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 2.5e-63 247.7 588 31.5
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 3.3e-63 247.3 552 31.7
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 3.3e-63 247.3 548 31.0
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 4.3e-63 246.9 563 31.1
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 4.3e-63 246.9 578 29.4
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 7.3e-63 246.1 544 31.6
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.6e-62 245.0 569 32.5
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 2.1e-62 244.6 567 30.5
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.7e-62 243.4 588 29.8
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.0e-61 242.3 582 29.4
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 4.0e-61 240.4 572 30.1
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 8.9e-61 239.2 559 30.2
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 2.6e-60 237.7 562 31.0
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 9.8e-60 235.7 557 30.0
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 1.9e-58 231.5 555 29.9
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 2.4e-58 231.1 564 28.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 2.4e-58 231.1 522 31.0
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.4e-58 229.9 571 29.2
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 7.0e-58 229.6 578 28.5
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 9.2e-58 229.2 551 27.2
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.2e-57 228.8 547 30.2
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 4.6e-57 226.9 550 29.5
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 7.8e-57 226.1 612 27.0
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.0e-56 225.7 562 30.4
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.3e-56 225.3 600 29.2
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 5.0e-56 223.4 573 29.0
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 6.6e-56 223.0 546 30.4
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.1e-55 222.2 559 28.6
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 3.3e-55 220.7 545 27.7
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 4.7e-54 216.9 366 37.2
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 4.0e-53 213.8 483 30.6
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 6.8e-53 213.0 668 27.2
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 6.8e-53 213.0 550 28.4
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 8.9e-53 212.6 563 28.8
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 3.4e-52 210.7 622 27.3
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 4.4e-52 210.3 638 27.1
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 5.8e-52 209.9 660 27.9
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 9.8e-52 209.1 571 29.1
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.7e-51 208.4 570 28.2
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 4.9e-51 206.8 604 29.5
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 6.4e-51 206.5 522 29.3
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 9.2e-50 202.6 505 29.9
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 2.7e-49 201.1 443 30.2
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 7.8e-49 199.5 498 29.3
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.3e-48 198.7 514 29.6
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 8.6e-48 196.1 551 27.8
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 8.6e-48 196.1 553 28.2
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 1.6e-46 191.8 461 31.0
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.8e-46 191.0 254 38.2
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.4e-45 188.7 380 32.4
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 3.1e-45 187.6 547 27.2
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 8.9e-45 186.0 292 36.3
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 2.0e-44 184.9 546 27.7
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.3e-43 182.2 552 27.5
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 3.7e-43 180.6 436 30.3
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 1.9e-42 178.3 553 26.2
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.6e-41 175.3 554 26.4
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.6e-41 175.3 567 26.8
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 3.5e-41 174.1 561 26.6
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 3.5e-41 174.1 551 27.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 6.0e-41 173.3 551 27.0
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 7.8e-41 172.9 550 26.5
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 2.3e-40 171.4 551 27.0
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 8.6e-40 169.5 291 34.4
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 3.3e-39 167.5 396 28.5
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.6e-38 165.2 310 33.9
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 2.0e-36 158.3 241 36.5
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 2.6e-36 157.9 542 26.6
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.1e-34 152.5 565 25.7
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 1.4e-34 152.1 443 26.9
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 2.4e-34 151.4 283 32.5
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 3.5e-33 147.5 395 28.6
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 7.8e-33 146.4 228 35.1
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.7e-32 145.2 399 26.8
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.2e-30 139.0 258 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 4.9e-27 127.1 442 26.2
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 8.4e-27 126.3 225 35.6
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 1.1e-26 125.9 233 33.9
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.4e-26 124.8 371 27.8
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 5.4e-26 123.6 308 30.2
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 3.9e-24 117.5 174 39.1
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-23 115.9 453 25.8
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 2.4e-21 108.2 166 36.7
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 6.9e-21 106.7 421 24.7
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 9.0e-21 106.3 169 35.5
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.2e-19 101.7 264 26.5
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 1.8e-16 92.0 235 31.1
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 6.7e-16 90.1 164 34.8
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 4.3e-15 87.4 248 30.2
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 6.2e-14 83.6 155 27.1
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 4.0e-13 80.9 294 25.5
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.7e-11 75.5 143 32.2
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 8.4e-11 73.2 162 29.0
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 4.2e-10 70.9 120 34.2
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 2.7e-09 68.2 124 27.4
AagrBONN_evm.TU.Sc2ySwM_117.2006 Anthoceros agrestis HOM05D004843 ORTHO05D005833 7.4e-07 60.1 85 40.0


User provided reference genes

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